Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_E10
(835 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC126303-1|AAI26304.1| 1720|Homo sapiens polymerase (RNA) I poly... 139 1e-32
BC117173-1|AAI17174.1| 1720|Homo sapiens polymerase (RNA) I poly... 139 1e-32
BC017115-1|AAH17115.2| 574|Homo sapiens POLR1A protein protein. 139 1e-32
AK025568-1|BAB15171.1| 495|Homo sapiens protein ( Homo sapiens ... 139 1e-32
AC012511-1|AAY24277.1| 922|Homo sapiens unknown protein. 139 1e-32
U33460-1|AAC99959.1| 1717|Homo sapiens DNA-directed RNA polymera... 134 5e-31
BC041089-1|AAH41089.1| 1390|Homo sapiens polymerase (RNA) III (D... 61 6e-09
BC014399-1|AAH14399.1| 162|Homo sapiens POLR3A protein protein. 61 6e-09
AY091462-1|AAM12032.1| 299|Homo sapiens RNA polymerase III subu... 61 6e-09
AL512628-1|CAI16466.1| 1390|Homo sapiens polymerase (RNA) III (D... 61 6e-09
AF021351-1|AAB86536.1| 1391|Homo sapiens RNA polymerase III larg... 59 2e-08
X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest... 42 0.003
X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest... 42 0.003
AL117467-1|CAB55942.1| 95|Homo sapiens hypothetical protein pr... 42 0.004
DQ336115-1|ABC61866.1| 180|Homo sapiens SPANX-N2 locus variant ... 32 2.2
DQ336114-1|ABC61865.1| 180|Homo sapiens SPANX-N2 locus variant ... 32 2.2
DQ336113-1|ABC61864.1| 180|Homo sapiens SPANX-N3 locus variant ... 32 2.2
DQ336112-1|ABC61863.1| 180|Homo sapiens SPANX-N2 locus variant ... 32 2.2
DQ336111-1|ABC61862.1| 180|Homo sapiens SPANX-N2 locus variant ... 32 2.2
AY825030-1|AAV97586.1| 180|Homo sapiens SPANX-N2 protein. 32 2.2
AL080239-5|CAI41652.1| 180|Homo sapiens novel SPANX protein pro... 32 2.2
BC047898-1|AAH47898.1| 692|Homo sapiens PPP1R12A protein protein. 31 3.9
BX537754-1|CAD97824.1| 742|Homo sapiens hypothetical protein pr... 30 9.0
BC045111-1|AAH45111.1| 742|Homo sapiens synaptic vesicle glycop... 30 9.0
AL591493-21|CAI12573.1| 682|Homo sapiens synaptic vesicle glyco... 30 9.0
AL591493-20|CAI12572.1| 742|Homo sapiens synaptic vesicle glyco... 30 9.0
AK075480-1|BAC11645.1| 682|Homo sapiens protein ( Homo sapiens ... 30 9.0
AB018279-1|BAA34456.2| 748|Homo sapiens KIAA0736 protein protein. 30 9.0
>BC126303-1|AAI26304.1| 1720|Homo sapiens polymerase (RNA) I
polypeptide A, 194kDa protein.
Length = 1720
Score = 139 bits (336), Expect = 1e-32
Identities = 66/140 (47%), Positives = 95/140 (67%), Gaps = 5/140 (3%)
Frame = +2
Query: 431 NYTFDTKNHQWCELTVLFPISFLRIDLSQALRETAMKSVVHEIKHIKRAI-----THKDN 595
+Y +DT+ WC++TV P+ + D+S + A +V++ K I R + +K+
Sbjct: 1514 DYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHGAVIYATKGITRCLLNETTNNKNE 1573
Query: 596 DIVYLKTEGINILQMFKYNHLLDMNRLYSNDIHAMANTYGIEAANKVIIKEIQNVFXVYG 775
+ L TEGIN+ ++FKY +LD+ RLYSNDIHA+ANTYGIEAA +VI KEI++VF VYG
Sbjct: 1574 KELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAIANTYGIEAALRVIEKEIKDVFAVYG 1633
Query: 776 ITVDPRXXTLIADYMTYNGI 835
I VDPR +L+ADYM + G+
Sbjct: 1634 IAVDPRHLSLVADYMCFEGV 1653
>BC117173-1|AAI17174.1| 1720|Homo sapiens polymerase (RNA) I
polypeptide A, 194kDa protein.
Length = 1720
Score = 139 bits (336), Expect = 1e-32
Identities = 66/140 (47%), Positives = 95/140 (67%), Gaps = 5/140 (3%)
Frame = +2
Query: 431 NYTFDTKNHQWCELTVLFPISFLRIDLSQALRETAMKSVVHEIKHIKRAI-----THKDN 595
+Y +DT+ WC++TV P+ + D+S + A +V++ K I R + +K+
Sbjct: 1514 DYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHGAVIYATKGITRCLLNETTNNKNE 1573
Query: 596 DIVYLKTEGINILQMFKYNHLLDMNRLYSNDIHAMANTYGIEAANKVIIKEIQNVFXVYG 775
+ L TEGIN+ ++FKY +LD+ RLYSNDIHA+ANTYGIEAA +VI KEI++VF VYG
Sbjct: 1574 KELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAIANTYGIEAALRVIEKEIKDVFAVYG 1633
Query: 776 ITVDPRXXTLIADYMTYNGI 835
I VDPR +L+ADYM + G+
Sbjct: 1634 IAVDPRHLSLVADYMCFEGV 1653
>BC017115-1|AAH17115.2| 574|Homo sapiens POLR1A protein protein.
Length = 574
Score = 139 bits (336), Expect = 1e-32
Identities = 66/140 (47%), Positives = 95/140 (67%), Gaps = 5/140 (3%)
Frame = +2
Query: 431 NYTFDTKNHQWCELTVLFPISFLRIDLSQALRETAMKSVVHEIKHIKRAI-----THKDN 595
+Y +DT+ WC++TV P+ + D+S + A +V++ K I R + +K+
Sbjct: 368 DYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHGAVIYATKGITRCLLNETTNNKNE 427
Query: 596 DIVYLKTEGINILQMFKYNHLLDMNRLYSNDIHAMANTYGIEAANKVIIKEIQNVFXVYG 775
+ L TEGIN+ ++FKY +LD+ RLYSNDIHA+ANTYGIEAA +VI KEI++VF VYG
Sbjct: 428 KELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAIANTYGIEAALRVIEKEIKDVFAVYG 487
Query: 776 ITVDPRXXTLIADYMTYNGI 835
I VDPR +L+ADYM + G+
Sbjct: 488 IAVDPRHLSLVADYMCFEGV 507
>AK025568-1|BAB15171.1| 495|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21915 fis, clone HEP03920. ).
Length = 495
Score = 139 bits (336), Expect = 1e-32
Identities = 66/140 (47%), Positives = 95/140 (67%), Gaps = 5/140 (3%)
Frame = +2
Query: 431 NYTFDTKNHQWCELTVLFPISFLRIDLSQALRETAMKSVVHEIKHIKRAI-----THKDN 595
+Y +DT+ WC++TV P+ + D+S + A +V++ K I R + +K+
Sbjct: 289 DYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHGAVIYATKGITRCLLNETTNNKNE 348
Query: 596 DIVYLKTEGINILQMFKYNHLLDMNRLYSNDIHAMANTYGIEAANKVIIKEIQNVFXVYG 775
+ L TEGIN+ ++FKY +LD+ RLYSNDIHA+ANTYGIEAA +VI KEI++VF VYG
Sbjct: 349 KELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAIANTYGIEAALRVIEKEIKDVFAVYG 408
Query: 776 ITVDPRXXTLIADYMTYNGI 835
I VDPR +L+ADYM + G+
Sbjct: 409 IAVDPRHLSLVADYMCFEGV 428
>AC012511-1|AAY24277.1| 922|Homo sapiens unknown protein.
Length = 922
Score = 139 bits (336), Expect = 1e-32
Identities = 66/140 (47%), Positives = 95/140 (67%), Gaps = 5/140 (3%)
Frame = +2
Query: 431 NYTFDTKNHQWCELTVLFPISFLRIDLSQALRETAMKSVVHEIKHIKRAI-----THKDN 595
+Y +DT+ WC++TV P+ + D+S + A +V++ K I R + +K+
Sbjct: 716 DYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHGAVIYATKGITRCLLNETTNNKNE 775
Query: 596 DIVYLKTEGINILQMFKYNHLLDMNRLYSNDIHAMANTYGIEAANKVIIKEIQNVFXVYG 775
+ L TEGIN+ ++FKY +LD+ RLYSNDIHA+ANTYGIEAA +VI KEI++VF VYG
Sbjct: 776 KELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAIANTYGIEAALRVIEKEIKDVFAVYG 835
Query: 776 ITVDPRXXTLIADYMTYNGI 835
I VDPR +L+ADYM + G+
Sbjct: 836 IAVDPRHLSLVADYMCFEGV 855
>U33460-1|AAC99959.1| 1717|Homo sapiens DNA-directed RNA polymerase I,
largest subunit protein.
Length = 1717
Score = 134 bits (323), Expect = 5e-31
Identities = 65/140 (46%), Positives = 94/140 (67%), Gaps = 5/140 (3%)
Frame = +2
Query: 431 NYTFDTKNHQWCELTVLFPISFLRIDLSQALRETAMKSVVHEIKHIKRAI-----THKDN 595
+Y +DT+ WC++TV P+ + D+S + A +V++ K I R + +K+
Sbjct: 1512 DYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHGAVIYATKGITRCLLNETTNNKNE 1571
Query: 596 DIVYLKTEGINILQMFKYNHLLDMNRLYSNDIHAMANTYGIEAANKVIIKEIQNVFXVYG 775
+ L TEGIN+ ++FKY +LD+ RLYSNDIHA+ANTYGIEA +VI KEI++VF VYG
Sbjct: 1572 KELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAIANTYGIEAL-RVIEKEIKDVFAVYG 1630
Query: 776 ITVDPRXXTLIADYMTYNGI 835
I VDPR +L+ADYM + G+
Sbjct: 1631 IAVDPRHLSLVADYMCFEGV 1650
>BC041089-1|AAH41089.1| 1390|Homo sapiens polymerase (RNA) III (DNA
directed) polypeptide A, 155kDa protein.
Length = 1390
Score = 60.9 bits (141), Expect = 6e-09
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Frame = +2
Query: 515 QALRETAMKSVVHEIKHIKRAITHKDN----DIVYLKTEGINILQMFKYNHLLDMNRLYS 682
Q L+E K VV I + RA+ H D + L EG N L+ H + R S
Sbjct: 1190 QFLKEDLPKVVVQGIPEVSRAVIHIDEQSGKEKYKLLVEGDN-LRAVMATHGVKGTRTTS 1248
Query: 683 NDIHAMANTYGIEAANKVIIKEIQNVFXVYGITVDPRXXTLIADYMTYNG 832
N+ + + T GIEAA II EIQ +G+++D R L++D MTY G
Sbjct: 1249 NNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKG 1298
>BC014399-1|AAH14399.1| 162|Homo sapiens POLR3A protein protein.
Length = 162
Score = 60.9 bits (141), Expect = 6e-09
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Frame = +2
Query: 515 QALRETAMKSVVHEIKHIKRAITHKDN----DIVYLKTEGINILQMFKYNHLLDMNRLYS 682
Q L+E K VV I + RA+ H D + L EG N L+ H + R S
Sbjct: 6 QFLKEDLPKVVVQGIPEVSRAVIHIDEQSGKEKYKLLVEGDN-LRAVMATHGVKGTRTTS 64
Query: 683 NDIHAMANTYGIEAANKVIIKEIQNVFXVYGITVDPRXXTLIADYMTYNG 832
N+ + + T GIEAA II EIQ +G+++D R L++D MTY G
Sbjct: 65 NNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKG 114
>AY091462-1|AAM12032.1| 299|Homo sapiens RNA polymerase III subunit
RPC155-D protein.
Length = 299
Score = 60.9 bits (141), Expect = 6e-09
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Frame = +2
Query: 515 QALRETAMKSVVHEIKHIKRAITHKDN----DIVYLKTEGINILQMFKYNHLLDMNRLYS 682
Q L+E K VV I + RA+ H D + L EG N L+ H + R S
Sbjct: 99 QFLKEDLPKVVVQGIPEVSRAVIHIDEQSGKEKYKLLVEGDN-LRAVMATHGVKGTRTTS 157
Query: 683 NDIHAMANTYGIEAANKVIIKEIQNVFXVYGITVDPRXXTLIADYMTYNG 832
N+ + + T GIEAA II EIQ +G+++D R L++D MTY G
Sbjct: 158 NNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKG 207
>AL512628-1|CAI16466.1| 1390|Homo sapiens polymerase (RNA) III (DNA
directed) (155kD) (RPC155) protein.
Length = 1390
Score = 60.9 bits (141), Expect = 6e-09
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Frame = +2
Query: 515 QALRETAMKSVVHEIKHIKRAITHKDN----DIVYLKTEGINILQMFKYNHLLDMNRLYS 682
Q L+E K VV I + RA+ H D + L EG N L+ H + R S
Sbjct: 1190 QFLKEDLPKVVVQGIPEVSRAVIHIDEQSGKEKYKLLVEGDN-LRAVMATHGVKGTRTTS 1248
Query: 683 NDIHAMANTYGIEAANKVIIKEIQNVFXVYGITVDPRXXTLIADYMTYNG 832
N+ + + T GIEAA II EIQ +G+++D R L++D MTY G
Sbjct: 1249 NNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKG 1298
>AF021351-1|AAB86536.1| 1391|Homo sapiens RNA polymerase III largest
subunit protein.
Length = 1391
Score = 59.3 bits (137), Expect = 2e-08
Identities = 41/111 (36%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Frame = +2
Query: 515 QALRETAMKSVVHEIKHIKRAITHKDN----DIVYLKTEGINILQMFKYNHLLDMNRLYS 682
Q L+E K VV I + RA+ H D + L EG N L+ H + R S
Sbjct: 1190 QFLKEDLPKVVVQGIPEVSRAVIHIDEQSGKEKYKLLVEGDN-LRAVMATHGVKGTRTTS 1248
Query: 683 NDIHAMANTYGIEAANKVIIKEIQNVFXV-YGITVDPRXXTLIADYMTYNG 832
N+ + + T GIEAA II EIQ V +G+++D R L++D MTY G
Sbjct: 1249 NNTYEVEKTLGIEAARTTIINEIQYTMVVNHGMSIDRRHVMLLSDLMTYKG 1299
>X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 41.9 bits (94), Expect = 0.003
Identities = 24/75 (32%), Positives = 40/75 (53%)
Frame = +2
Query: 608 LKTEGINILQMFKYNHLLDMNRLYSNDIHAMANTYGIEAANKVIIKEIQNVFXVYGITVD 787
L+T+G++++++ + D R SNDI + GIEA K + +E+ +V G V+
Sbjct: 1336 LETDGVSLMRVLSEKDV-DPVRTTSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVN 1394
Query: 788 PRXXTLIADYMTYNG 832
R L+ D MT G
Sbjct: 1395 YRHLALLCDTMTCRG 1409
>X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 41.9 bits (94), Expect = 0.003
Identities = 24/75 (32%), Positives = 40/75 (53%)
Frame = +2
Query: 608 LKTEGINILQMFKYNHLLDMNRLYSNDIHAMANTYGIEAANKVIIKEIQNVFXVYGITVD 787
L+T+G++++++ + D R SNDI + GIEA K + +E+ +V G V+
Sbjct: 1336 LETDGVSLMRVLSEKDV-DPVRTTSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVN 1394
Query: 788 PRXXTLIADYMTYNG 832
R L+ D MT G
Sbjct: 1395 YRHLALLCDTMTCRG 1409
>AL117467-1|CAB55942.1| 95|Homo sapiens hypothetical protein
protein.
Length = 95
Score = 41.5 bits (93), Expect = 0.004
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +2
Query: 752 QNVFXVYGITVDPRXXTLIADYMTYNGI 835
++VF VYGI VDPR +L+ADYM + G+
Sbjct: 1 KDVFAVYGIAVDPRHLSLVADYMCFEGV 28
>DQ336115-1|ABC61866.1| 180|Homo sapiens SPANX-N2 locus variant 5
protein.
Length = 180
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 46 RKHAKATCGVMWASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSS 189
RKH K + + ++ + +ED+G D+ E + + DLDSS
Sbjct: 58 RKHTKINSNQLEKDQSRENSINPVQEEEDEGLDSAEGSSQEDEDLDSS 105
>DQ336114-1|ABC61865.1| 180|Homo sapiens SPANX-N2 locus variant 4
protein.
Length = 180
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 46 RKHAKATCGVMWASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSS 189
RKH K + + ++ + +ED+G D+ E + + DLDSS
Sbjct: 58 RKHTKINSNQLEKDQSRENSINPVQEEEDEGLDSAEGSSQEDEDLDSS 105
>DQ336113-1|ABC61864.1| 180|Homo sapiens SPANX-N3 locus variant 3
protein.
Length = 180
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 46 RKHAKATCGVMWASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSS 189
RKH K + + ++ + +ED+G D+ E + + DLDSS
Sbjct: 58 RKHTKINSNQLEKDQSRENSINPVQEEEDEGLDSAEGSSQEDEDLDSS 105
>DQ336112-1|ABC61863.1| 180|Homo sapiens SPANX-N2 locus variant 2
protein.
Length = 180
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 46 RKHAKATCGVMWASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSS 189
RKH K + + ++ + +ED+G D+ E + + DLDSS
Sbjct: 58 RKHTKINSNQLEKDQSRENSINPVQEEEDEGLDSAEGSSQEDEDLDSS 105
>DQ336111-1|ABC61862.1| 180|Homo sapiens SPANX-N2 locus variant 1
protein.
Length = 180
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 46 RKHAKATCGVMWASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSS 189
RKH K + + ++ + +ED+G D+ E + + DLDSS
Sbjct: 58 RKHTKINSNQLEKDQSRENSINPVQEEEDEGLDSAEGSSQEDEDLDSS 105
>AY825030-1|AAV97586.1| 180|Homo sapiens SPANX-N2 protein.
Length = 180
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 46 RKHAKATCGVMWASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSS 189
RKH K + + ++ + +ED+G D+ E + + DLDSS
Sbjct: 58 RKHTKINSNQLEKDQSRENSINPVQEEEDEGLDSAEGSSQEDEDLDSS 105
>AL080239-5|CAI41652.1| 180|Homo sapiens novel SPANX protein
protein.
Length = 180
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 46 RKHAKATCGVMWASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSS 189
RKH K + + ++ + +ED+G D+ E + + DLDSS
Sbjct: 58 RKHTKINSNQLEKDQSRENSINPVQEEEDEGLDSAEGSSQEDEDLDSS 105
>BC047898-1|AAH47898.1| 692|Homo sapiens PPP1R12A protein protein.
Length = 692
Score = 31.5 bits (68), Expect = 3.9
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 255 KSKNTRTQNQRRKKNLTMKWNSSMIKRRSPKKVKSLQKK 371
+S++TRT+ Q++KK K K++ KK K +KK
Sbjct: 654 RSRSTRTREQKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 692
>BX537754-1|CAD97824.1| 742|Homo sapiens hypothetical protein
protein.
Length = 742
Score = 30.3 bits (65), Expect = 9.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +1
Query: 43 VRKHA--KATCGVMWASEQKKQRARAAKSDEDDGDDAPEPTD 162
V+KHA K G+ ++ +R+ + +EDD DD P P+D
Sbjct: 22 VKKHAAKKVVKGLDRVQDEYSRRSYSRFEEEDDDDDFPAPSD 63
>BC045111-1|AAH45111.1| 742|Homo sapiens synaptic vesicle
glycoprotein 2A protein.
Length = 742
Score = 30.3 bits (65), Expect = 9.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +1
Query: 43 VRKHA--KATCGVMWASEQKKQRARAAKSDEDDGDDAPEPTD 162
V+KHA K G+ ++ +R+ + +EDD DD P P+D
Sbjct: 22 VKKHAAKKVVKGLDRVQDEYSRRSYSRFEEEDDDDDFPAPSD 63
>AL591493-21|CAI12573.1| 682|Homo sapiens synaptic vesicle
glycoprotein 2A protein.
Length = 682
Score = 30.3 bits (65), Expect = 9.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +1
Query: 43 VRKHA--KATCGVMWASEQKKQRARAAKSDEDDGDDAPEPTD 162
V+KHA K G+ ++ +R+ + +EDD DD P P+D
Sbjct: 22 VKKHAAKKVVKGLDRVQDEYSRRSYSRFEEEDDDDDFPAPSD 63
>AL591493-20|CAI12572.1| 742|Homo sapiens synaptic vesicle
glycoprotein 2A protein.
Length = 742
Score = 30.3 bits (65), Expect = 9.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +1
Query: 43 VRKHA--KATCGVMWASEQKKQRARAAKSDEDDGDDAPEPTD 162
V+KHA K G+ ++ +R+ + +EDD DD P P+D
Sbjct: 22 VKKHAAKKVVKGLDRVQDEYSRRSYSRFEEEDDDDDFPAPSD 63
>AK075480-1|BAC11645.1| 682|Homo sapiens protein ( Homo sapiens
cDNA PSEC0174 fis, clone NT2RP2002760, highly similar to
SYNAPTIC VESICLE PROTEIN 2. ).
Length = 682
Score = 30.3 bits (65), Expect = 9.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +1
Query: 43 VRKHA--KATCGVMWASEQKKQRARAAKSDEDDGDDAPEPTD 162
V+KHA K G+ ++ +R+ + +EDD DD P P+D
Sbjct: 22 VKKHAAKKVVKGLDRVQDEYSRRSYSRFEEEDDDDDFPAPSD 63
>AB018279-1|BAA34456.2| 748|Homo sapiens KIAA0736 protein protein.
Length = 748
Score = 30.3 bits (65), Expect = 9.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +1
Query: 43 VRKHA--KATCGVMWASEQKKQRARAAKSDEDDGDDAPEPTD 162
V+KHA K G+ ++ +R+ + +EDD DD P P+D
Sbjct: 28 VKKHAAKKVVKGLDRVQDEYSRRSYSRFEEEDDDDDFPAPSD 69
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,544,697
Number of Sequences: 237096
Number of extensions: 1765186
Number of successful extensions: 5075
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4999
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10482413384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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