Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_E10
(835 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical pr... 120 2e-27
Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical pr... 120 2e-27
AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical ... 120 2e-27
U41991-1|AAA83341.2| 1400|Caenorhabditis elegans Rna polymerase,... 51 1e-06
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 44 1e-04
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 44 1e-04
Z93392-2|CAI46615.1| 120|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z83219-10|CAI46565.1| 120|Caenorhabditis elegans Hypothetical p... 39 0.004
Z92827-5|CAB07325.1| 732|Caenorhabditis elegans Hypothetical pr... 34 0.11
AL110500-21|CAI79283.1| 197|Caenorhabditis elegans Hypothetical... 31 1.0
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical p... 31 1.3
Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical p... 31 1.3
Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical pr... 31 1.3
AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like ... 31 1.3
U88167-10|AAB42222.1| 804|Caenorhabditis elegans Hypothetical p... 30 1.8
U88167-9|AAK68288.1| 890|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF100656-11|AAF99960.1| 115|Caenorhabditis elegans Hypothetical... 30 1.8
Z81539-4|CAB04392.2| 208|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z69661-3|CAA93490.1| 293|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z66564-8|CAM84731.1| 892|Caenorhabditis elegans Hypothetical pr... 29 5.4
U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical pr... 29 5.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 5.4
AL032659-3|CAA21749.2| 892|Caenorhabditis elegans Hypothetical ... 29 5.4
AF017812-1|AAB70559.1| 191|Caenorhabditis elegans histone H1.2 ... 29 5.4
AF017811-1|AAB70666.1| 191|Caenorhabditis elegans histone H1.2 ... 29 5.4
AC084197-3|AAN63427.1| 173|Caenorhabditis elegans Histone h1 li... 29 5.4
AC084197-2|AAM44399.1| 241|Caenorhabditis elegans Histone h1 li... 29 5.4
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81486-8|CAB03990.2| 338|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z77652-3|CAB01115.1| 349|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlec... 28 7.2
>Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical protein
Y48E1A.1a protein.
Length = 1737
Score = 120 bits (288), Expect = 2e-27
Identities = 60/171 (35%), Positives = 101/171 (59%), Gaps = 5/171 (2%)
Frame = +2
Query: 335 KESEEGQESPKENDADSSKIISDVVGSVRNATNYTFDTKNHQWCELTVLFPI-SFLRIDL 511
KE +G++ E +S I V N ++YT+D K+++WCE+ P+ + ++D+
Sbjct: 1477 KEGLDGEDQTTEPLLVNSSRIQSVQRLSENISSYTYDVKSNKWCEVVFELPLRNKTKMDV 1536
Query: 512 SQALRETAMKSVVHEIKHIKRAI--THKDN--DIVYLKTEGINILQMFKYNHLLDMNRLY 679
S + + +VH+ I+R + T + N ++ L+T+G+N+ FK+ +LD+N +Y
Sbjct: 1537 SSIVEKEVELFIVHQTPGIERCVETTEQKNGKEMTILQTQGVNLAAFFKHADVLDVNSVY 1596
Query: 680 SNDIHAMANTYGIEAANKVIIKEIQNVFXVYGITVDPRXXTLIADYMTYNG 832
SND++ + YG+EA +K I E+ NVF VYGI V R +L ADYMT+ G
Sbjct: 1597 SNDLNLILENYGVEACSKAITTEMNNVFAVYGIEVSKRHLSLTADYMTFTG 1647
>Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical protein
Y48E1A.1a protein.
Length = 1737
Score = 120 bits (288), Expect = 2e-27
Identities = 60/171 (35%), Positives = 101/171 (59%), Gaps = 5/171 (2%)
Frame = +2
Query: 335 KESEEGQESPKENDADSSKIISDVVGSVRNATNYTFDTKNHQWCELTVLFPI-SFLRIDL 511
KE +G++ E +S I V N ++YT+D K+++WCE+ P+ + ++D+
Sbjct: 1477 KEGLDGEDQTTEPLLVNSSRIQSVQRLSENISSYTYDVKSNKWCEVVFELPLRNKTKMDV 1536
Query: 512 SQALRETAMKSVVHEIKHIKRAI--THKDN--DIVYLKTEGINILQMFKYNHLLDMNRLY 679
S + + +VH+ I+R + T + N ++ L+T+G+N+ FK+ +LD+N +Y
Sbjct: 1537 SSIVEKEVELFIVHQTPGIERCVETTEQKNGKEMTILQTQGVNLAAFFKHADVLDVNSVY 1596
Query: 680 SNDIHAMANTYGIEAANKVIIKEIQNVFXVYGITVDPRXXTLIADYMTYNG 832
SND++ + YG+EA +K I E+ NVF VYGI V R +L ADYMT+ G
Sbjct: 1597 SNDLNLILENYGVEACSKAITTEMNNVFAVYGIEVSKRHLSLTADYMTFTG 1647
>AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical
protein Y48E1A.1a protein.
Length = 1737
Score = 120 bits (288), Expect = 2e-27
Identities = 60/171 (35%), Positives = 101/171 (59%), Gaps = 5/171 (2%)
Frame = +2
Query: 335 KESEEGQESPKENDADSSKIISDVVGSVRNATNYTFDTKNHQWCELTVLFPI-SFLRIDL 511
KE +G++ E +S I V N ++YT+D K+++WCE+ P+ + ++D+
Sbjct: 1477 KEGLDGEDQTTEPLLVNSSRIQSVQRLSENISSYTYDVKSNKWCEVVFELPLRNKTKMDV 1536
Query: 512 SQALRETAMKSVVHEIKHIKRAI--THKDN--DIVYLKTEGINILQMFKYNHLLDMNRLY 679
S + + +VH+ I+R + T + N ++ L+T+G+N+ FK+ +LD+N +Y
Sbjct: 1537 SSIVEKEVELFIVHQTPGIERCVETTEQKNGKEMTILQTQGVNLAAFFKHADVLDVNSVY 1596
Query: 680 SNDIHAMANTYGIEAANKVIIKEIQNVFXVYGITVDPRXXTLIADYMTYNG 832
SND++ + YG+EA +K I E+ NVF VYGI V R +L ADYMT+ G
Sbjct: 1597 SNDLNLILENYGVEACSKAITTEMNNVFAVYGIEVSKRHLSLTADYMTFTG 1647
>U41991-1|AAA83341.2| 1400|Caenorhabditis elegans Rna polymerase,
class iii (c) protein1 protein.
Length = 1400
Score = 50.8 bits (116), Expect = 1e-06
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Frame = +2
Query: 515 QALRETAMKSVVHEIKHIKRAITHKDN---DIVYLKTEGINILQMFKYNHLLDMNRLYSN 685
Q L+ + VV I + R + H D D L EG + + + +D + N
Sbjct: 1205 QILKYSLANVVVKGIPSVNRCVIHADEKKGDFYSLLVEGTDFRSVLS-SVGVDPRKTNFN 1263
Query: 686 DIHAMANTYGIEAANKVIIKEIQNVFXVYGITVDPRXXTLIADYMTYNG 832
+ +A+ GIEAA II EI +GI +D R L+AD MTY G
Sbjct: 1264 NALVVADVLGIEAARSCIINEIIATMDAHGIGLDRRHVMLLADVMTYRG 1312
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/75 (36%), Positives = 38/75 (50%)
Frame = +2
Query: 608 LKTEGINILQMFKYNHLLDMNRLYSNDIHAMANTYGIEAANKVIIKEIQNVFXVYGITVD 787
L+T+G +L++ + D R SNDI + GIEA K I +E+ NV G V+
Sbjct: 1324 LETDGTALLRVLSERQI-DPVRTTSNDICEIFEVLGIEAVRKAIEREMDNVISFDGSYVN 1382
Query: 788 PRXXTLIADYMTYNG 832
R L+ D MT G
Sbjct: 1383 YRHLALLCDVMTAKG 1397
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/75 (36%), Positives = 38/75 (50%)
Frame = +2
Query: 608 LKTEGINILQMFKYNHLLDMNRLYSNDIHAMANTYGIEAANKVIIKEIQNVFXVYGITVD 787
L+T+G +L++ + D R SNDI + GIEA K I +E+ NV G V+
Sbjct: 1331 LETDGTALLRVLSERQI-DPVRTTSNDICEIFEVLGIEAVRKAIEREMDNVISFDGSYVN 1389
Query: 788 PRXXTLIADYMTYNG 832
R L+ D MT G
Sbjct: 1390 YRHLALLCDVMTAKG 1404
>Z93392-2|CAI46615.1| 120|Caenorhabditis elegans Hypothetical
protein Y48E1A.1b protein.
Length = 120
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 746 EIQNVFXVYGITVDPRXXTLIADYMTYNG 832
E+ NVF VYGI V R +L ADYMT+ G
Sbjct: 2 EMNNVFAVYGIEVSKRHLSLTADYMTFTG 30
>Z83219-10|CAI46565.1| 120|Caenorhabditis elegans Hypothetical
protein Y48E1A.1b protein.
Length = 120
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 746 EIQNVFXVYGITVDPRXXTLIADYMTYNG 832
E+ NVF VYGI V R +L ADYMT+ G
Sbjct: 2 EMNNVFAVYGIEVSKRHLSLTADYMTFTG 30
>Z92827-5|CAB07325.1| 732|Caenorhabditis elegans Hypothetical
protein C29F7.6 protein.
Length = 732
Score = 34.3 bits (75), Expect = 0.11
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = +3
Query: 240 AIKEQKSKNTRTQNQRRKKNLT---MKWNSSMIKRRSPKKVKSLQKKMTLIPAKLFPMSL 410
A++ KSKNTR + + + NLT K +IKR++ K + L+ +F L
Sbjct: 168 AVENSKSKNTRGRKSKIQSNLTPINEKSECKIIKRKNEK------TPLLLLTVPMFLDPL 221
Query: 411 VASETRLITHSTQKITNGAN*PY 479
S T ++ +++ +T G N Y
Sbjct: 222 TTSGTEIVKKASEWLTTGRNNVY 244
>AL110500-21|CAI79283.1| 197|Caenorhabditis elegans Hypothetical
protein Y87G2A.20 protein.
Length = 197
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 246 KEQKSKNTRTQNQRRKKNLTMKWNSSMIKRRSPKKVKSLQKKMT 377
K K+ T+T+ +RK + KW + K+R +K KK T
Sbjct: 25 KGGKANKTKTKATKRKAQMKKKWTKTAQKKRKERKKADKAKKKT 68
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 589 RQ*HRLSKNRRHQHIADVQIQSFAGHEQTVQQRHTRDGQHVWHRSRQ-QSHH 741
RQ H+ + ++HQ + Q Q HE+ Q+R +D Q + Q Q HH
Sbjct: 641 RQHHQAQQAQQHQQQQERQQQERQQHERQQQERQQQDRQQQAQQHHQAQQHH 692
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 589 RQ*HRLSKNRRHQHIADVQIQSFAGHEQTVQQRHTRDGQHVWHRSRQ-QSHH 741
RQ H+ + ++HQ + Q Q HE+ Q+R +D Q + Q Q HH
Sbjct: 641 RQHHQAQQAQQHQQQQERQQQERQQHERQQQERQQQDRQQQAQQHHQAQQHH 692
>Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical
protein C07A9.3c protein.
Length = 893
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +1
Query: 598 HRLSKNRRHQHIADVQIQSFAGHEQTVQQRHTRDGQHVWHRSRQQSH 738
H++ ++ QH S+ H+Q +QQ H Q + + + Q H
Sbjct: 84 HQMQMQQQQQHHQQQYNMSYHNHQQQMQQMHYHQQQQQYQQQQAQHH 130
>Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical
protein C07A9.3b protein.
Length = 965
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +1
Query: 598 HRLSKNRRHQHIADVQIQSFAGHEQTVQQRHTRDGQHVWHRSRQQSH 738
H++ ++ QH S+ H+Q +QQ H Q + + + Q H
Sbjct: 151 HQMQMQQQQQHHQQQYNMSYHNHQQQMQQMHYHQQQQQYQQQQAQHH 197
>Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical
protein C07A9.3a protein.
Length = 960
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +1
Query: 598 HRLSKNRRHQHIADVQIQSFAGHEQTVQQRHTRDGQHVWHRSRQQSH 738
H++ ++ QH S+ H+Q +QQ H Q + + + Q H
Sbjct: 151 HQMQMQQQQQHHQQQYNMSYHNHQQQMQQMHYHQQQQQYQQQQAQHH 197
>AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like
kinase protein.
Length = 960
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +1
Query: 598 HRLSKNRRHQHIADVQIQSFAGHEQTVQQRHTRDGQHVWHRSRQQSH 738
H++ ++ QH S+ H+Q +QQ H Q + + + Q H
Sbjct: 151 HQMQMQQQQQHHQQQYNMSYHNHQQQMQQMHYHQQQQQYQQQQAQHH 197
>U88167-10|AAB42222.1| 804|Caenorhabditis elegans Hypothetical
protein D2092.1a protein.
Length = 804
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 52 HAKATCGVMWASEQKKQRARAAKSDEDDGDDA 147
H KAT G++ SE+KK++ +++ D DD+
Sbjct: 187 HQKATKGILSTSEKKKEQRLIMSTEDTDEDDS 218
>U88167-9|AAK68288.1| 890|Caenorhabditis elegans Hypothetical
protein D2092.1b protein.
Length = 890
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 52 HAKATCGVMWASEQKKQRARAAKSDEDDGDDA 147
H KAT G++ SE+KK++ +++ D DD+
Sbjct: 273 HQKATKGILSTSEKKKEQRLIMSTEDTDEDDS 304
>AF100656-11|AAF99960.1| 115|Caenorhabditis elegans Hypothetical
protein F49F1.12 protein.
Length = 115
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +3
Query: 246 KEQKSKNTRTQNQRRKKNLTMKWNSSMIKRRSPKKVKSLQKKMTLIPAKLFPMSLVASET 425
K+ K K ++ +++KK+ S K++S K KS +KK + A + P V S
Sbjct: 5 KKSKKKKSKEPAKKKKKSADSSQKVSKKKKKSSKSKKSAEKKKPEVVAAMDPD--VKSTQ 62
Query: 426 RLITHSTQK 452
R + QK
Sbjct: 63 RSANQNRQK 71
>Z81539-4|CAB04392.2| 208|Caenorhabditis elegans Hypothetical
protein F46A8.6 protein.
Length = 208
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +3
Query: 246 KEQKSKNTRTQNQRRKKNLTMKWNSSMIKRRSPKKVKSLQKKMTLIPAKLFP 401
K+ K K ++ +++KK+ S K++S K KS +KK + A + P
Sbjct: 68 KKSKKKKSKEPAKKKKKSADSSQKVSKKKKKSSKSKKSAEKKKPEVVAPMDP 119
>Z69661-3|CAA93490.1| 293|Caenorhabditis elegans Hypothetical
protein F48F7.5 protein.
Length = 293
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 46 RKHAKATCGVMWASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSS 189
R+ T V ++ K++R DE+ DD E TD +D+D +
Sbjct: 194 RELDSTTVDVGYSLPNKRRRVEEEDEDEEADDDNGESTDLEGSDVDEN 241
>Z66564-8|CAM84731.1| 892|Caenorhabditis elegans Hypothetical
protein Y71H9A.1 protein.
Length = 892
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 578 ITHKDNDIVYLKTEGINILQMFKYNHLLDMNRLYSNDIHAMANTY 712
+ K N I L + + +L +N L+D NR+YSN+ + + Y
Sbjct: 245 LADKRNYIAALTDDLVEVLMQI-HNRLIDFNRVYSNNTYLLMIHY 288
>U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical
protein R04E5.8b protein.
Length = 142
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +1
Query: 598 HRLSKNRRHQHIADV-QIQSFAGH---EQTVQQRHTRDGQHVWHRSRQQSHHKGD 750
H +NR H + Q Q + H ++ +Q H R+ R+RQQ H +GD
Sbjct: 82 HNQDRNRHRNHDGNRHQNQDRSRHHNQDRNRRQNHDRNRHQSQGRNRQQDHERGD 136
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +1
Query: 598 HRLSKNRRHQHIADV-QIQSFAGH---EQTVQQRHTRDGQHVWHRSRQQSHHKGD 750
H +NR H + Q Q + H ++ +Q H R+ R+RQQ H +GD
Sbjct: 926 HNQDRNRHRNHDGNRHQNQDRSRHHNQDRNRRQNHDRNRHQSQGRNRQQDHERGD 980
>AL032659-3|CAA21749.2| 892|Caenorhabditis elegans Hypothetical
protein Y71H9A.1 protein.
Length = 892
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 578 ITHKDNDIVYLKTEGINILQMFKYNHLLDMNRLYSNDIHAMANTY 712
+ K N I L + + +L +N L+D NR+YSN+ + + Y
Sbjct: 245 LADKRNYIAALTDDLVEVLMQI-HNRLIDFNRVYSNNTYLLMIHY 288
>AF017812-1|AAB70559.1| 191|Caenorhabditis elegans histone H1.2
protein.
Length = 191
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 246 KEQKSKNTRTQNQRRKKNLTMKWNSSMIKR-RSPKKV-KSLQKKMTLIPAK 392
K+ +K T ++ KK K +K+ +SPKK+ K KK+ PAK
Sbjct: 124 KKPVAKKAATGEKKAKKTTVAKKTGDKVKKAKSPKKIAKPAAKKVAKSPAK 174
>AF017811-1|AAB70666.1| 191|Caenorhabditis elegans histone H1.2
protein.
Length = 191
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 246 KEQKSKNTRTQNQRRKKNLTMKWNSSMIKR-RSPKKV-KSLQKKMTLIPAK 392
K+ +K T ++ KK K +K+ +SPKK+ K KK+ PAK
Sbjct: 124 KKPVAKKAATGEKKAKKTTVAKKTGDKVKKAKSPKKIAKPAAKKVAKSPAK 174
>AC084197-3|AAN63427.1| 173|Caenorhabditis elegans Histone h1 like
protein 2, isoformb protein.
Length = 173
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 246 KEQKSKNTRTQNQRRKKNLTMKWNSSMIKR-RSPKKV-KSLQKKMTLIPAK 392
K+ +K T ++ KK K +K+ +SPKK+ K KK+ PAK
Sbjct: 106 KKPVAKKAATGEKKAKKTTVAKKTGDKVKKAKSPKKIAKPAAKKVAKSPAK 156
>AC084197-2|AAM44399.1| 241|Caenorhabditis elegans Histone h1 like
protein 2, isoforma protein.
Length = 241
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 246 KEQKSKNTRTQNQRRKKNLTMKWNSSMIKR-RSPKKV-KSLQKKMTLIPAK 392
K+ +K T ++ KK K +K+ +SPKK+ K KK+ PAK
Sbjct: 174 KKPVAKKAATGEKKAKKTTVAKKTGDKVKKAKSPKKIAKPAAKKVAKSPAK 224
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 502 NRFVSSSTRNRHEVCRPRNQTHKTCD 579
N ++ST + C PRN TH TC+
Sbjct: 3138 NNICANSTCGMNGQCVPRNMTHYTCE 3163
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 502 NRFVSSSTRNRHEVCRPRNQTHKTCD 579
N ++ST + C PRN TH TC+
Sbjct: 3138 NNICANSTCGMNGQCVPRNMTHYTCE 3163
>Z81486-8|CAB03990.2| 338|Caenorhabditis elegans Hypothetical
protein C53A5.10 protein.
Length = 338
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 255 KSKNTRTQNQRRKKNLTMKWNSSMI 329
K+KNT+T +Q RK +L + + S+MI
Sbjct: 228 KTKNTKTSSQTRKMSLQIFFQSAMI 252
>Z77652-3|CAB01115.1| 349|Caenorhabditis elegans Hypothetical
protein C06B3.5 protein.
Length = 349
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +2
Query: 371 NDADSSKIISDVVGSVRNATNYTFDTKNHQ-WCELTVLFPISFLRIDLSQALRETAMKSV 547
+ A +K + VG T Y NHQ CE+ LFP FL + ++ ET K++
Sbjct: 251 DSATFAKSALNTVGHTSQTTGYI----NHQIQCEMLALFPECFLDSFVKKSSVETREKAL 306
Query: 548 V-HEIKHI 568
E KH+
Sbjct: 307 AKKENKHL 314
>AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlecan
protein.
Length = 925
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 502 NRFVSSSTRNRHEVCRPRNQTHKTCD 579
N ++ST + C PRN TH TC+
Sbjct: 688 NNICANSTCGMNGQCVPRNMTHYTCE 713
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,154,523
Number of Sequences: 27780
Number of extensions: 301863
Number of successful extensions: 1420
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1411
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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