Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_E09
(846 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 120 2e-27
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 119 3e-27
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 119 3e-27
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 34 0.16
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 31 0.87
08_02_1369 - 26445725-26445812,26446443-26446529,26446720-264469... 30 2.0
12_02_0709 - 22359705-22360292,22360396-22360560,22360650-223611... 29 3.5
06_01_0080 + 644021-645463 29 3.5
01_01_0703 - 5425713-5425862,5426302-5426451,5426853-5426964,542... 29 3.5
03_03_0258 - 15905847-15905990,15906088-15906244,15906374-159065... 29 4.7
10_01_0266 + 2816391-2818898,2818934-2819162,2819369-2819444,281... 29 6.2
03_05_0968 + 29277122-29277445,29278389-29278505,29278957-292791... 29 6.2
04_04_0124 + 22929700-22929761,22930192-22930310,22930459-229305... 28 8.1
03_04_0243 + 19298293-19299117 28 8.1
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 120 bits (288), Expect = 2e-27
Identities = 57/100 (57%), Positives = 76/100 (76%), Gaps = 2/100 (2%)
Frame = +2
Query: 248 IVLMGKNTMMRKAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA 421
IVLMGKNT++R+ IK H DN N +L+P + GNVG +FT+GDL EVR+++ + KV A
Sbjct: 53 IVLMGKNTLIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGA 112
Query: 422 PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 541
PAR G +AP+ VV+P NTGL P +TSFFQ L+IPTKI++
Sbjct: 113 PARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINK 152
Score = 95.5 bits (227), Expect = 5e-20
Identities = 47/97 (48%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Frame = +1
Query: 538 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIXP 717
KGT+EII V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+PE+LD+
Sbjct: 152 KGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTE 211
Query: 718 XDLGAKFQXGVANVXALXXAXG-XXXXXXPXXIANGF 825
DL KF GV+ V ++ A P NG+
Sbjct: 212 DDLMEKFASGVSMVASVSLAISYPTIAAAPHMFLNGY 248
Score = 51.6 bits (118), Expect = 8e-07
Identities = 28/55 (50%), Positives = 32/55 (58%)
Frame = +1
Query: 100 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSXYRAHGK 264
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG GK
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGK 58
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 119 bits (287), Expect = 3e-27
Identities = 57/100 (57%), Positives = 76/100 (76%), Gaps = 2/100 (2%)
Frame = +2
Query: 248 IVLMGKNTMMRKAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA 421
IVLMGKNT++R+ IK H DN N +L+P + GNVG +FT+GDL EVR+++ + KV A
Sbjct: 53 IVLMGKNTLIRRCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGA 112
Query: 422 PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 541
PAR G +AP+ VV+P NTGL P +TSFFQ L+IPTKI++
Sbjct: 113 PARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINK 152
Score = 95.5 bits (227), Expect = 5e-20
Identities = 47/97 (48%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Frame = +1
Query: 538 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIXP 717
KGT+EII V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+PE+LD+
Sbjct: 152 KGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTE 211
Query: 718 XDLGAKFQXGVANVXALXXAXG-XXXXXXPXXIANGF 825
DL KF GV+ V ++ A P NG+
Sbjct: 212 EDLMEKFASGVSMVASVSLAISYPTIAAAPHMFLNGY 248
Score = 51.6 bits (118), Expect = 8e-07
Identities = 28/55 (50%), Positives = 32/55 (58%)
Frame = +1
Query: 100 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSXYRAHGK 264
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG GK
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGK 58
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 119 bits (287), Expect = 3e-27
Identities = 57/100 (57%), Positives = 76/100 (76%), Gaps = 2/100 (2%)
Frame = +2
Query: 248 IVLMGKNTMMRKAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA 421
IVLMGKNT++R+ IK H DN N +L+P + GNVG +FT+GDL EVR+++ + KV A
Sbjct: 53 IVLMGKNTLIRRCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGA 112
Query: 422 PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 541
PAR G +AP+ VV+P NTGL P +TSFFQ L+IPTKI++
Sbjct: 113 PARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINK 152
Score = 95.5 bits (227), Expect = 5e-20
Identities = 47/97 (48%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Frame = +1
Query: 538 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIXP 717
KGT+EII V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+PE+LD+
Sbjct: 152 KGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTE 211
Query: 718 XDLGAKFQXGVANVXALXXAXG-XXXXXXPXXIANGF 825
DL KF GV+ V ++ A P NG+
Sbjct: 212 EDLMEKFASGVSMVASVSLAISYPTIAAAPHMFLNGY 248
Score = 51.6 bits (118), Expect = 8e-07
Identities = 28/55 (50%), Positives = 32/55 (58%)
Frame = +1
Query: 100 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSXYRAHGK 264
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG GK
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGK 58
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 33.9 bits (74), Expect = 0.16
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Frame = +2
Query: 299 LDNNPALEKL-LPH--IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSV---- 457
L N AL+KL LPH ++GN+GF+ + + ++ D +L++ A P + LS
Sbjct: 396 LGNIAALQKLVLPHNNLEGNMGFLSSLSECRQLEDLILDHNSFVGALPDHLGNLSARLIS 455
Query: 458 VIPAHN--TGLGPEKTSFFQALSI 523
I HN G PEK S +L +
Sbjct: 456 FIADHNKLAGSLPEKMSNLSSLEL 479
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 31.5 bits (68), Expect = 0.87
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Frame = +2
Query: 311 PALEK-LLPHIKGN---VGFVFTRGDLVEV--RDKLLENKVQAPARPGAIAPLSVVIPA 469
PAL+K L H K VG + T GDL + + L+++KV P PGA+ +S + PA
Sbjct: 131 PALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALP--PGAMGKISYIAPA 187
>08_02_1369 -
26445725-26445812,26446443-26446529,26446720-26446928,
26447501-26447583,26447672-26447720,26447800-26447959,
26448795-26448891,26449424-26449535,26449637-26449702,
26450135-26450206,26450413-26450487,26451139-26451266,
26451551-26451772,26452084-26452355,26452447-26452543,
26452633-26452738,26454834-26455220
Length = 769
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -3
Query: 334 WQQFLEGWIVVQVVFDGFAHHCVFSHEHDXWSHVA-RYGSAASVASPRYR 188
W FLEGW V F+G A H V + W + Y S+A A P R
Sbjct: 356 WSPFLEGWNSPAVQFEGPAVH-VVKQSYLSWCPTSCAYTSSAPSAQPHDR 404
>12_02_0709 -
22359705-22360292,22360396-22360560,22360650-22361157,
22361159-22361577,22362261-22362722,22362853-22364415
Length = 1234
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/75 (29%), Positives = 28/75 (37%)
Frame = -1
Query: 639 WRDVQHVEKGGFRSSNLVTGLQDVYIVDDFNSTLEILVGIERAWKKEVFSGPRPVLWAGM 460
WR +QH G S+NL L +Y + F L + K + W
Sbjct: 57 WRLIQHDYGDGDGSANLTPALNVLYSLALFQGVLFFYQWVSYFAGKRLIEKVASKYWQNS 116
Query: 459 TTDNGAMAPGRAGAW 415
GA A RAGAW
Sbjct: 117 KEAGGAGA--RAGAW 129
>06_01_0080 + 644021-645463
Length = 480
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 535 NLGRDRKSLEERGLLWTEAGVVGGND 458
N R K++EERGLL+ GV GG +
Sbjct: 110 NTERREKAMEERGLLYLGMGVSGGEE 135
>01_01_0703 -
5425713-5425862,5426302-5426451,5426853-5426964,
5427120-5427481,5427578-5427712,5427812-5427889,
5427989-5428174,5428266-5428452,5428552-5428658,
5428732-5428806,5428885-5429040,5429165-5429437,
5429548-5429643,5429724-5429814,5429883-5430385
Length = 886
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = +1
Query: 550 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 702
E++ +++P D VG S +++ +++ P+S VV+ +Y+S + A +I
Sbjct: 346 EMLPSGFLIRPSD-VGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKI 395
>03_03_0258 -
15905847-15905990,15906088-15906244,15906374-15906504,
15906991-15907126,15907193-15907464,15907874-15908169,
15908279-15908646,15908922-15908987,15909064-15909129,
15909226-15909297,15909391-15909459,15909549-15909620,
15909708-15909776,15909874-15909945,15910046-15910178,
15911223-15911361
Length = 753
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 680 PESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 558
PE LT RP +G+ FN LR ++ +PT G + S+
Sbjct: 358 PEKNEPLTLRPIASGK-FNQLRTISIISPTAKEGLQKTVSM 397
>10_01_0266 +
2816391-2818898,2818934-2819162,2819369-2819444,
2819776-2819830,2822042-2822110,2823077-2823321,
2824029-2824065
Length = 1072
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 25 PHGSRAF---CLVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPK 171
PH S A CL L+F T R R K T K + II++L+ YP+
Sbjct: 802 PHASSADIDKCLFLEFLMLMTCTTIRNSRSFKFTHKKFGYWMIIEMLNSYPR 853
>03_05_0968 +
29277122-29277445,29278389-29278505,29278957-29279114,
29279678-29279727,29279968-29280161,29280867-29281049,
29281152-29281270,29281383-29281522,29281857-29281937,
29282286-29282389
Length = 489
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 367 GEHEANVALDVWQQFLEGWIVVQVVFDGFAHH 272
G HEA+ L W+ + GW + F GFA H
Sbjct: 189 GNHEASNYL--WELYYGGWAAPNIYFLGFAGH 218
>04_04_0124 +
22929700-22929761,22930192-22930310,22930459-22930541,
22930640-22930738,22930769-22930786,22931044-22931110,
22931244-22931319,22931450-22931516,22932303-22932520,
22933124-22933191,22933743-22933822,22934362-22934448,
22934524-22934631,22934753-22934848,22935045-22935140,
22936826-22937155
Length = 557
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -1
Query: 603 RSSNLVTGLQDVYIVDDFNSTLEILVGIERAWKKEVFSGPRPVLWAGMTTDNGAMAPGRA 424
+SS L G Q + I + F + VG+ +++FS + G+ TD A+ PG +
Sbjct: 212 QSSALRVGQQCLAIGNPFGFDHALTVGVISGLNRDIFSQAGVTIGGGIQTD-AAINPGNS 270
Query: 423 G 421
G
Sbjct: 271 G 271
>03_04_0243 + 19298293-19299117
Length = 274
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -1
Query: 462 MTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMCGNSFS 319
+ TD+ + APG A A + S SRTS +P ++ PT P +S +
Sbjct: 172 VVTDSLSRAPGAAWAAAMAPTSWSRTS--APPASSSPTSPRRARSSLT 217
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,253,472
Number of Sequences: 37544
Number of extensions: 515275
Number of successful extensions: 1441
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1438
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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