Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_E09
         (846 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   162   3e-40
U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z75711-8|CAJ43907.1|  118|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical pr...    28   7.3  
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ...    28   7.3  
U80836-6|AAB37894.2|  259|Caenorhabditis elegans Hypothetical pr...    28   9.6  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  162 bits (393), Expect = 3e-40
 Identities = 90/229 (39%), Positives = 128/229 (55%), Gaps = 1/229 (0%)
 Frame = +1

Query: 94  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSXYRAHGKKHN 273
           M RED++TWK+NYF K+++L +EYPKC +VG DNVGS+QMQ+IR ++RG      GK   
Sbjct: 1   MVREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTM 60

Query: 274 DAQSHQRPPGQQSSPRETVATHQGQRWLRVHXXXXXXXXXQTVGE-QXXXXXXXWCHCPI 450
             ++ +   G+  S  E +  H  +    V            + E +           P 
Sbjct: 61  IRKALRGHLGKNPS-LEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPC 119

Query: 451 VXXXXXXXXXXXXXEDLFLPGSFYPYQDFKGTIEIINDVHILKPGDKVGASEATLLNMLN 630
                         +  F      P +  +GTIEI+NDVH++K GDKVGASE+ LLNML 
Sbjct: 120 DVKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLG 179

Query: 631 ISPFSYGLVVKQVYDSGTIFAPEILDIXPXDLGAKFQXGVANVXALXXA 777
           ++PFSYGLVV+QVYD GT++ PE+LD+   +L  +F  GV NV ++  A
Sbjct: 180 VTPFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLA 228



 Score =  146 bits (355), Expect = 1e-35
 Identities = 68/97 (70%), Positives = 80/97 (82%)
 Frame = +2

Query: 251 VLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPAR 430
           +LMGKNTM+RKA++ HL  NP+LEKLLPHI  NVGFVFT+ DL E+R KLLEN+  APA+
Sbjct: 53  ILMGKNTMIRKALRGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAK 112

Query: 431 PGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 541
            GAIAP  V +P  NTG+GPEKTSFFQAL IPTKI+R
Sbjct: 113 AGAIAPCDVKLPPQNTGMGPEKTSFFQALQIPTKIAR 149


>U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical
           protein F10E7.5 protein.
          Length = 220

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = +2

Query: 260 GKNTMMRKAIKDHLDNNPA--LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARP 433
           GKN ++  A+     +  A  L K    +KG  G +FT     EV  +  E   +  AR 
Sbjct: 69  GKNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARV 128

Query: 434 GAIAPLSVVIP 466
           G +A  +VV+P
Sbjct: 129 GDVATETVVLP 139


>Z75711-8|CAJ43907.1|  118|Caenorhabditis elegans Hypothetical
           protein K02B12.9 protein.
          Length = 118

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 199 GSQQMQQIRISLRGSXYRAHGKKHNDAQSHQRP 297
           GS Q + + +S  GS Y ++GK  +   SH +P
Sbjct: 27  GSHQFKPVYLSPYGSKYESYGKYDDHKDSHYQP 59


>U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical
           protein C33G8.12 protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +1

Query: 49  LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDE 162
           L+ K   S ++ +SR+ +EDK +  SN+++K  QLL E
Sbjct: 156 LLWKLGESIFSDVSRLSKEDKNSMISNFYIK-WQLLME 192


>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
           protein Y46B2A.3 protein.
          Length = 1145

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -1

Query: 459 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPT 349
           TT      P  AG WT+ +N ++R  TR P    +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227


>U80836-6|AAB37894.2|  259|Caenorhabditis elegans Hypothetical
           protein B0432.8 protein.
          Length = 259

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 585 TGLQDVYIVDDFNSTLEILVGIERAWKKEVFSG 487
           TG+Q +    +F S  E  +GI + W   V++G
Sbjct: 27  TGIQKMINFPEFESQFEKSIGISKKWPGSVYTG 59


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,008,377
Number of Sequences: 27780
Number of extensions: 409892
Number of successful extensions: 1221
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)