Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_E08
(859 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 84 1e-16
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 83 4e-16
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 45 7e-05
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 44 2e-04
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 40 0.003
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 38 0.010
03_01_0249 - 1935355-1935827,1936129-1936330 34 0.17
06_01_0611 + 4420873-4422207 30 2.7
10_08_0710 + 20070655-20070990,20071074-20071469 29 3.6
11_06_0584 - 25220371-25222917 29 6.3
05_01_0123 - 846081-846167,846264-846404,846749-846866,847382-84... 29 6.3
02_04_0633 - 24616563-24617279 29 6.3
01_01_0735 + 5730783-5733320 29 6.3
02_03_0179 + 16025962-16026143,16026570-16026684,16026852-160270... 28 8.3
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 84.2 bits (199), Expect = 1e-16
Identities = 50/132 (37%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Frame = +2
Query: 5 EYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVA---- 172
EY+G V++ NF G +NK+ +FLK P GK+P E+ +G V ESNAIA YVA
Sbjct: 46 EYTGVKVELTKNFEMGVSNKTPEFLKMNPLGKIPVLETPEGAVF--ESNAIARYVARLKD 103
Query: 173 NESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALK 352
N SL G L + + QW +S +E+ W++P LG + E A + L +L
Sbjct: 104 NSSLCGSSLIDYSHIEQWMDFSATEVDANIGRWLYPRLGFGPYVPVLEEFAITSLKRSLG 163
Query: 353 VLDGHLLTRTFL 388
L+ HL + T+L
Sbjct: 164 ALNTHLASNTYL 175
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +1
Query: 436 LLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPK 591
L + F +L S S +V+R+F T+ +QP V+G + P K
Sbjct: 191 LYYGFVRILIKSFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAESVPPVQKK 242
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 82.6 bits (195), Expect = 4e-16
Identities = 53/141 (37%), Positives = 74/141 (52%), Gaps = 13/141 (9%)
Frame = +2
Query: 5 EYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANES- 181
EYSG V++A NF G +NK+ ++LK P GKVP E+ DG V ESNAIA YV + S
Sbjct: 583 EYSGVKVELAKNFQMGVSNKTPEYLKMNPIGKVPILETPDGPVF--ESNAIARYVLSSSH 640
Query: 182 ------------LRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERA 325
L G L A + QW +S +E+ + W+FP LG + + E A
Sbjct: 641 FPEVTRSKSDNPLYGSSLIEYAHIEQWIDFSATEVDANTGKWLFPRLGFAPYVAVSEEAA 700
Query: 326 KSDLLAALKVLDGHLLTRTFL 388
+ L +L L+ HL + T+L
Sbjct: 701 IAALKRSLGALNTHLASNTYL 721
Score = 81.0 bits (191), Expect = 1e-15
Identities = 52/141 (36%), Positives = 73/141 (51%), Gaps = 13/141 (9%)
Frame = +2
Query: 5 EYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV----- 169
EYSG V++ NF G +NK+ +FLK P GK+P E+ DG V ESNAIA YV
Sbjct: 22 EYSGVKVELVKNFQMGVSNKTPEFLKMNPIGKIPVLETPDGPVF--ESNAIARYVLSHCH 79
Query: 170 --------ANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERA 325
A+ L G L A + QW +S +E+ W++P LGI + + E A
Sbjct: 80 FPEVTRSKADNPLYGSSLIEYAHIEQWNDFSATEVDANIGKWLYPRLGIAPYVAVSEEAA 139
Query: 326 KSDLLAALKVLDGHLLTRTFL 388
+ L +L L+ HL + T+L
Sbjct: 140 IAALKRSLGALNTHLASNTYL 160
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +1
Query: 436 LLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPK 591
L F ++ S S +V+R+F T+ +QP V+G + + P K
Sbjct: 176 LYMGFARIMTKSFTSEFPHVERYFWTMVNQPNFKKVLGDVKQAESVPPVQKK 227
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 45.2 bits (102), Expect = 7e-05
Identities = 34/81 (41%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Frame = +2
Query: 2 LEYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVAN- 175
LE +G + VA + GE N+S L + P GK+PAFE DG+V L ES AI YV
Sbjct: 21 LEEAGASYELVAVDMAAGE-NRSRHHLARSPFGKIPAFE--DGEVTLFESRAIQRYVLRN 77
Query: 176 ----ESLRGGDLATQARVWQW 226
+ LR G+L A V W
Sbjct: 78 YNKPDLLREGNLEESAMVDMW 98
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 44.0 bits (99), Expect = 2e-04
Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 14/143 (9%)
Frame = +2
Query: 2 LEYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVAN- 175
LE G D + V +F+ GE N S + +++ P GK+PA + DG ++L ES AIA Y+
Sbjct: 22 LEEVGADYELVTVDFLAGEQN-SPEHVERNPFGKIPALQ--DGDLVLFESRAIAKYILRK 78
Query: 176 ------ESLRGGDLATQARVWQWASWSDSELLPA------SCAWVFPYLGIMQFNKQNVE 319
+ LR D+ A V W + PA C +FP + + N+Q V
Sbjct: 79 YKSSKVDLLRESDIREAALVDVWTEVEAHQYYPALSPIVFECI-IFPIMRGVPTNQQVVH 137
Query: 320 RAKSDLLAALKVLDGHLLTRTFL 388
+ L L+ + L +L
Sbjct: 138 ESLEKLKKVLETYEARLSGSRYL 160
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 39.5 bits (88), Expect = 0.003
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = +2
Query: 2 LEYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV---- 169
LE G + +V P + +K + + P G+VPAFE DG + L ES AI+ Y+
Sbjct: 22 LEEVGAEYEVVPVDMSTGEHKRPPHISRNPFGQVPAFE--DGDLTLFESRAISKYILRKH 79
Query: 170 ANESLRGGDLATQARVWQWASWSDSELLPASCAWVF 277
++ LR +L+ A V W S A +F
Sbjct: 80 GSDLLRESNLSESAMVDVWLEVESSHFDGAMSPIIF 115
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 37.9 bits (84), Expect = 0.010
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Frame = +2
Query: 2 LEYSGTDVKVAPNFVFGET-NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANE 178
LE G D ++ + FG+ +K D L + P G+VPAF+ DG ++L ES AI Y+ +
Sbjct: 22 LEEVGADYEIV-DVDFGDREHKGPDHLARNPFGQVPAFQ--DGDLMLFESRAICRYILRK 78
Query: 179 S--------LRGGDLATQARVWQW 226
LR GD + A V W
Sbjct: 79 HRATDEANLLREGDPSESAVVDAW 102
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +2
Query: 59 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQAR 214
+KS FLK P G+VPAF+ D + ES AI Y+ ++ G+ R
Sbjct: 42 HKSPSFLKLQPFGQVPAFK--DSLTTVFESRAICRYICDQYADSGNKTLMGR 91
>06_01_0611 + 4420873-4422207
Length = 444
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Frame = +3
Query: 477 FVADKRSAL-----VPDRRPPAASVGRRRLAHALC 566
+V D+ +AL P RRPPA S RRRLA + C
Sbjct: 279 YVMDEHAALRVAVRTPKRRPPARSRSRRRLALSEC 313
>10_08_0710 + 20070655-20070990,20071074-20071469
Length = 243
Score = 29.5 bits (63), Expect = 3.6
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Frame = +2
Query: 59 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV------ANESLRGGDLATQARVW 220
NKSE L P K +GK + ES I YV A ESL D +A
Sbjct: 45 NKSELLLSSNPVHKKVPVLIHNGKPIC-ESQIIVEYVDEAFPDAGESLLPSDPYDRAVAR 103
Query: 221 QWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLD 361
WA++ + + +P AW LG+ + K A +LAA++ L+
Sbjct: 104 FWAAYINDKFMP---AWQKASLGLTEEEK---AEAVKQMLAAIENLE 144
>11_06_0584 - 25220371-25222917
Length = 848
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 327 FARSTFCLLNCMIPR*GKTQAQEAGSSSLSD 235
+ +ST C C +PR K +AG S+++D
Sbjct: 408 WTQSTICCCYCRVPRIMKATTADAGGSNIND 438
>05_01_0123 -
846081-846167,846264-846404,846749-846866,847382-847528,
848439-848441,848590-848627,848808-848851,848959-849016
Length = 211
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 74 FLKKFPAGKVPAFESADGK 130
FLK P GKVP F DGK
Sbjct: 49 FLKISPEGKVPVFNGGDGK 67
>02_04_0633 - 24616563-24617279
Length = 238
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 150 MPSLTTLPMKVSAEEIWLPKPVSGSGHHGLTANYC 254
MP+ TT+ M+ S + W P+ G HG+ N+C
Sbjct: 1 MPAATTIQMEASPADHWSPRHRRRCGCHGV--NWC 33
>01_01_0735 + 5730783-5733320
Length = 845
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 34 TEFRIWRDQQVRRLLEEVSCRKSACIRKCRWKGA 135
T F +W D + + +E SC+K C+ C K A
Sbjct: 372 TYFHLWGDSRGAPMTDEESCKKD-CLSNCSCKAA 404
>02_03_0179 +
16025962-16026143,16026570-16026684,16026852-16027065,
16027346-16027397,16027411-16027696
Length = 282
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -1
Query: 574 EEPHRA*ASRRRPTLAAGGRRSGTNAERLSATNGRSGLARAGKHAA 437
++PHR A R+P A+G G A R+S + + R HAA
Sbjct: 32 QQPHRP-APLRQPLAASGHCGGGRGARRVSRSRSSAAHPRGRLHAA 76
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,432,403
Number of Sequences: 37544
Number of extensions: 466493
Number of successful extensions: 1558
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1555
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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