Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_E08
(859 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 53 2e-07
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 31 0.79
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 31 0.79
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 31 0.79
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 31 0.79
U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr... 31 1.1
U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormon... 29 5.6
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 28 7.4
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 28 7.4
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 28 7.4
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 28 9.8
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/61 (42%), Positives = 42/61 (68%)
Frame = +1
Query: 427 SVTLLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQEL 606
++ LL AFQ+VLD + R S++NV RWF TV +QP V V+G ++L ++ ++ K+ EL
Sbjct: 118 ALDLLPAFQYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQAKFTEL 177
Query: 607 A 609
+
Sbjct: 178 S 178
Score = 48.4 bits (110), Expect = 6e-06
Identities = 25/82 (30%), Positives = 44/82 (53%)
Frame = +2
Query: 143 ESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVER 322
E +A+ + + L + A QW +++ LLPA +V P + F+K+ VE+
Sbjct: 24 EGDALLFGAESIGLHLTGTSANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQ 83
Query: 323 AKSDLLAALKVLDGHLLTRTFL 388
K++L L+VLD L+ +T+L
Sbjct: 84 YKNELNGQLQVLDRVLVKKTYL 105
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/61 (42%), Positives = 42/61 (68%)
Frame = +1
Query: 427 SVTLLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQEL 606
++ LL AFQ+VLD + R S++NV RWF TV +QP V V+G ++L ++ ++ K+ EL
Sbjct: 143 ALDLLPAFQYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQAKFTEL 202
Query: 607 A 609
+
Sbjct: 203 S 203
Score = 56.4 bits (130), Expect = 2e-08
Identities = 35/102 (34%), Positives = 53/102 (51%)
Frame = +2
Query: 83 KFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPAS 262
KFP G PAFE G LL + +I ++ S A QW +++ LLPA
Sbjct: 39 KFPLGVTPAFE---GDALLFGAESIGLHLTGTS-------ANAETVQWLQFAEGYLLPAV 88
Query: 263 CAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFL 388
+V P + F+K+ VE+ K++L L+VLD L+ +T+L
Sbjct: 89 LGYVLPSVSAANFDKKTVEQYKNELNGQLQVLDRVLVKKTYL 130
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/53 (41%), Positives = 36/53 (67%)
Frame = +1
Query: 451 QHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQELA 609
Q+VLD + R S++NV RWF TV +QP V V+G ++L ++ ++ K+ EL+
Sbjct: 118 QYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQAKFTELS 170
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = +2
Query: 83 KFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPAS 262
KFP G PAFE G LL + +I ++ S A QW +++ LLPA
Sbjct: 39 KFPLGVTPAFE---GDALLFGAESIGLHLTGTS-------ANAETVQWLQFAEGYLLPAV 88
Query: 263 CAWVFPYLGIMQFNKQNVERAKSDLLAALK-VLDGH 367
+V P + F+K+ VE+ K++L L+ VLD +
Sbjct: 89 LGYVLPSVSAANFDKKTVEQYKNELNGQLQYVLDAN 124
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical
protein F25C8.3b protein.
Length = 3175
Score = 31.5 bits (68), Expect = 0.79
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 454 HVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQEL 606
H L PS+ ++L +V RW L A P V GSL L P Q++
Sbjct: 85 HGLSPSLSNALASVSRWKLVRAALPHVIQCCGSLLLANVGEKKLPTSLQKI 135
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical
protein F25C8.3a protein.
Length = 3184
Score = 31.5 bits (68), Expect = 0.79
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 454 HVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQEL 606
H L PS+ ++L +V RW L A P V GSL L P Q++
Sbjct: 85 HGLSPSLSNALASVSRWKLVRAALPHVIQCCGSLLLANVGEKKLPTSLQKI 135
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 31.5 bits (68), Expect = 0.79
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 32 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 211
+P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 212 RVWQ 223
++WQ
Sbjct: 1085 QIWQ 1088
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 31.5 bits (68), Expect = 0.79
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 32 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 211
+P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 212 RVWQ 223
++WQ
Sbjct: 1085 QIWQ 1088
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 31.5 bits (68), Expect = 0.79
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 32 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 211
+P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 212 RVWQ 223
++WQ
Sbjct: 1085 QIWQ 1088
>U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical
protein ZK430.1 protein.
Length = 1650
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -3
Query: 182 DFHWQRSKRWHCFQLEAPFHRHFRMQALFRQETSSR-SLRTCWSRQIRNSV 33
DF W+RSK W Q ++ R SS+ S+ TC + IR++V
Sbjct: 153 DFDWKRSKEWQFMQQFTKTETPIPFTSIARATLSSKHSIITCITDHIRHAV 203
>U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 78 protein.
Length = 387
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 230 SWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAAL 349
S+ ++ +L A C W + + + +K+NV + KS L+ L
Sbjct: 298 SFEENAILKALCCWQTAHFKLEECDKENVRKQKSLLVQCL 337
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 28.3 bits (60), Expect = 7.4
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = -1
Query: 226 PLPDTGLGSQISSAETFIGNVVSDGI--AFS*KHLSIGT-FECRHFSGRKLLQEVFGLVG 56
P+ + + +S TF+G VVSDGI S S+ T FE R R++L+ V+
Sbjct: 514 PMNGSTIREDFASESTFLGRVVSDGIMPRISASSNSVLTEFETRF---RRILKRVYR--S 568
Query: 55 LAKYEIR 35
L ++EIR
Sbjct: 569 LQQHEIR 575
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 62 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 169
K + F K G+VPA E +GK ++ ES I Y+
Sbjct: 62 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL 97
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 62 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 169
K + F K G+VPA E +GK ++ ES I Y+
Sbjct: 345 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL 380
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 74 FLKKFPAGKVPAFESADGKVLLTESNAIAYYV 169
+L K P G+VPA E +GKV + ESN I Y+
Sbjct: 138 YLPKSPIGRVPALE-INGKV-VWESNVIVEYL 167
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 62 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 169
K + + K G+VP E A+GK L+ ES I Y+
Sbjct: 62 KPDWYFTKNYKGQVPTLEHAEGKKLVIESAVIPEYL 97
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,094,573
Number of Sequences: 27780
Number of extensions: 351608
Number of successful extensions: 1029
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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