Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_E02
(852 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 307 8e-84
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 307 8e-84
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 307 8e-84
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 307 8e-84
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 281 4e-76
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 281 4e-76
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 281 4e-76
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 280 1e-75
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 280 1e-75
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 277 7e-75
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 275 3e-74
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 275 3e-74
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 258 4e-69
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 258 5e-69
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 239 1e-63
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 214 8e-56
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 142 2e-34
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 141 5e-34
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 140 1e-33
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 139 3e-33
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 139 3e-33
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 138 5e-33
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 124 8e-29
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 124 8e-29
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 82 4e-16
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 82 4e-16
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.60
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 3.2
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 3.2
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 3.2
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 7.3
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 9.7
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 9.7
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 9.7
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 9.7
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 9.7
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 9.7
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 9.7
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 9.7
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 307 bits (753), Expect = 8e-84
Identities = 136/172 (79%), Positives = 151/172 (87%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 2 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 61
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 62 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 121
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYP 625
IR+LAD CTGLQGFL+FH LLMERLSVDYGKK+ L F+ YP
Sbjct: 122 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYP 173
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 307 bits (753), Expect = 8e-84
Identities = 136/172 (79%), Positives = 151/172 (87%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYP 625
IR+LAD CTGLQGFL+FH LLMERLSVDYGKK+ L F+ YP
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYP 172
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 307 bits (753), Expect = 8e-84
Identities = 136/172 (79%), Positives = 151/172 (87%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 2 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 61
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 62 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 121
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYP 625
IR+LAD CTGLQGFL+FH LLMERLSVDYGKK+ L F+ YP
Sbjct: 122 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYP 173
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 307 bits (753), Expect = 8e-84
Identities = 136/172 (79%), Positives = 151/172 (87%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 2 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 61
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 62 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 121
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYP 625
IR+LAD CTGLQGFL+FH LLMERLSVDYGKK+ L F+ YP
Sbjct: 122 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYP 173
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 281 bits (689), Expect = 4e-76
Identities = 126/172 (73%), Positives = 145/172 (84%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
RE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G++
Sbjct: 2 REVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRY 59
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDR
Sbjct: 60 VPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDR 119
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYP 625
IR+LAD C+GLQGF +FH LLMERLSVDYGKKS L F+ YP
Sbjct: 120 IRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP 171
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 281 bits (689), Expect = 4e-76
Identities = 124/174 (71%), Positives = 144/174 (82%)
Frame = +2
Query: 104 KTRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 283
++RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 284 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 463
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 464 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYP 625
DR+R+L + C GLQGFL+FH LLMERLSVDYGKKS L F YP
Sbjct: 125 DRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYP 178
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 281 bits (689), Expect = 4e-76
Identities = 126/172 (73%), Positives = 145/172 (84%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
RE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G++
Sbjct: 2 REVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRY 59
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDR
Sbjct: 60 VPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDR 119
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYP 625
IR+LAD C+GLQGF +FH LLMERLSVDYGKKS L F+ YP
Sbjct: 120 IRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP 171
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 280 bits (686), Expect = 1e-75
Identities = 125/172 (72%), Positives = 145/172 (84%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
RE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G++
Sbjct: 2 REVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGRY 59
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDR
Sbjct: 60 VPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDR 119
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYP 625
IR+LAD C+GLQGF +FH LLMERLSVDYGKKS L F+ YP
Sbjct: 120 IRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP 171
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 280 bits (686), Expect = 1e-75
Identities = 125/172 (72%), Positives = 145/172 (84%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
RE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G++
Sbjct: 2 REVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGRY 59
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDR
Sbjct: 60 VPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDR 119
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYP 625
IR+LAD C+GLQGF +FH LLMERLSVDYGKKS L F+ YP
Sbjct: 120 IRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP 171
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 277 bits (679), Expect = 7e-75
Identities = 121/172 (70%), Positives = 143/172 (83%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
RE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GKH
Sbjct: 2 REIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGKH 61
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+DR
Sbjct: 62 VPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDR 121
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYP 625
+R+L ++C LQGFLIFH L+MERLS+DYGKK+ L F+ YP
Sbjct: 122 VRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYP 173
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 275 bits (674), Expect = 3e-74
Identities = 123/172 (71%), Positives = 143/172 (83%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
RE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G++
Sbjct: 2 REVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGRY 59
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LDR
Sbjct: 60 VPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDR 119
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYP 625
IR+LAD C+GLQGF +FH LLMERLSVDYGKKS L F+ YP
Sbjct: 120 IRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP 171
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 275 bits (674), Expect = 3e-74
Identities = 123/172 (71%), Positives = 143/172 (83%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
RE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G++
Sbjct: 2 REVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGRY 59
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LDR
Sbjct: 60 VPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDR 119
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYP 625
IR+LAD C+GLQGF +FH LLMERLSVDYGKKS L F+ YP
Sbjct: 120 IRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP 171
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 258 bits (632), Expect = 4e-69
Identities = 116/173 (67%), Positives = 136/173 (78%)
Frame = +2
Query: 107 TRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 286
+RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GK
Sbjct: 7 SREVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGK 66
Query: 287 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 466
HVPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+D
Sbjct: 67 HVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMD 126
Query: 467 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYP 625
R+++LA+ C GLQGF+IFH LLMERLS +YGKK L FA YP
Sbjct: 127 RVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYP 179
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 258 bits (631), Expect = 5e-69
Identities = 116/172 (67%), Positives = 134/172 (77%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
RE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+H
Sbjct: 2 REVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGRH 58
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LDR
Sbjct: 59 VPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDR 118
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYP 625
IR+LA+ C GLQGF +FH +LMERLS +YGKKS L F+ YP
Sbjct: 119 IRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYP 170
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 239 bits (586), Expect = 1e-63
Identities = 106/172 (61%), Positives = 129/172 (75%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYP 625
IRK + C GLQGFL+FH LLMERLSV++GKKS L F+ YP
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYP 176
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 214 bits (522), Expect = 8e-56
Identities = 96/151 (63%), Positives = 115/151 (76%)
Frame = +2
Query: 173 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 352
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 353 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXX 532
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 533 XXXXXXXXXLLMERLSVDYGKKSXLXFAXYP 625
LLMERLS +YGKK L FA YP
Sbjct: 121 GGTGSGFLSLLMERLSTEYGKKPKLEFAIYP 151
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 142 bits (345), Expect = 2e-34
Identities = 71/172 (41%), Positives = 98/172 (56%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
RE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK+
Sbjct: 2 REIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGKY 59
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYP 625
+RK A+ C LQGF + H LL+ ++ +Y + F+ P
Sbjct: 120 VRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVP 171
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 141 bits (342), Expect = 5e-34
Identities = 71/172 (41%), Positives = 99/172 (57%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
RE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK+
Sbjct: 2 REIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGKY 59
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYP 625
IRK A+ C LQGF + H LL+ ++ +Y + F+ P
Sbjct: 120 IRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVP 171
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 140 bits (339), Expect = 1e-33
Identities = 70/172 (40%), Positives = 99/172 (57%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
RE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK+
Sbjct: 2 REIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGKY 59
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYP 625
IRK A+ C LQGF + H LL+ ++ ++ + F+ P
Sbjct: 120 IRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVP 171
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 139 bits (336), Expect = 3e-33
Identities = 69/172 (40%), Positives = 98/172 (56%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
RE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K+
Sbjct: 2 REIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNKY 59
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYP 625
+RK A+ LQGF + H LL+ ++ +Y + F+ P
Sbjct: 120 VRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP 171
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 139 bits (336), Expect = 3e-33
Identities = 69/172 (40%), Positives = 98/172 (56%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
RE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K+
Sbjct: 2 REIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNKY 59
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYP 625
+RK A+ LQGF + H LL+ ++ +Y + F+ P
Sbjct: 120 VRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP 171
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 138 bits (334), Expect = 5e-33
Identities = 68/172 (39%), Positives = 95/172 (55%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 2 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGKY 59
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 60 VPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYP 625
+RK A+ C LQGF + H LL+ ++ +Y + + F+ P
Sbjct: 120 VRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVP 171
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 124 bits (299), Expect = 8e-29
Identities = 65/174 (37%), Positives = 94/174 (54%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K+
Sbjct: 2 KEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRKY 59
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 60 VPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSV 119
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYPGA 631
IR+ A+ L+GF + H LL+ +L +Y K+ + P A
Sbjct: 120 IRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSA 173
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 124 bits (299), Expect = 8e-29
Identities = 65/174 (37%), Positives = 94/174 (54%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K+
Sbjct: 2 KEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRKY 59
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 60 VPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSV 119
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLXFAXYPGA 631
IR+ A+ L+GF + H LL+ +L +Y K+ + P A
Sbjct: 120 IRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSA 173
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 82.2 bits (194), Expect = 4e-16
Identities = 53/167 (31%), Positives = 82/167 (49%), Gaps = 3/167 (1%)
Frame = +2
Query: 107 TRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 286
T ++VHVGQ G Q+ A W+ EHGI GQ + + +D + F +
Sbjct: 4 TGALMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDH 60
Query: 287 HVPRAVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDL 457
+VPRAV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ +
Sbjct: 61 YVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEK 119
Query: 458 VLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 598
++D I + A+ L G L H LL+ERL + KK
Sbjct: 120 IMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKK 166
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 82.2 bits (194), Expect = 4e-16
Identities = 53/167 (31%), Positives = 82/167 (49%), Gaps = 3/167 (1%)
Frame = +2
Query: 107 TRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 286
T ++VHVGQ G Q+ A W+ EHGI GQ + + +D + F +
Sbjct: 4 TGALMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDH 60
Query: 287 HVPRAVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDL 457
+VPRAV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ +
Sbjct: 61 YVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEK 119
Query: 458 VLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 598
++D I + A+ L G L H LL+ERL + KK
Sbjct: 120 IMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKK 166
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 135 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 290
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = +2
Query: 101 IKTRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 280
I R+ +VH QI +C CL +G++P G P I G FF+++G
Sbjct: 49 ITGRDDCNVHYSMH--QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGL 102
Query: 281 GKHVPRAVFVDLEPTVVDE 337
++ F ++ P DE
Sbjct: 103 KRN---KKFANVSPQTADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = +2
Query: 101 IKTRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 280
I R+ +VH QI +C CL +G++P G P I G FF+++G
Sbjct: 67 ITGRDDCNVHYSMH--QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGL 120
Query: 281 GKHVPRAVFVDLEPTVVDE 337
++ F ++ P DE
Sbjct: 121 KRN---KKFANVSPQTADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = +2
Query: 101 IKTRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 280
I R+ +VH QI +C CL +G++P G P I G FF+++G
Sbjct: 49 ITGRDDCNVHYSMH--QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGL 102
Query: 281 GKHVPRAVFVDLEPTVVDE 337
++ F ++ P DE
Sbjct: 103 KRN---KKFANVSPQTADE 118
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 397 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 302
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 326 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 326 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 326 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 326 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 326 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 326 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 326 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 326 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,945,800
Number of Sequences: 27780
Number of extensions: 320711
Number of successful extensions: 768
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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