Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_D23
(965 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0316 - 16688911-16689044,16689141-16689211,16689303-166893... 99 5e-21
08_02_1483 - 27451391-27451794,27451883-27452387 36 0.048
03_01_0245 + 1916718-1917443,1917534-1917719 33 0.34
03_01_0648 - 4749150-4749275,4749902-4749986,4750761-4750861,475... 33 0.45
07_01_1131 - 10510404-10511000 31 1.0
01_06_1160 - 34996840-34996979,34997316-34997478,34997970-349983... 31 1.0
05_07_0249 - 28659760-28659831,28660376-28660412,28660691-28660974 31 1.4
03_02_0730 + 10784784-10785341 31 1.4
02_05_0447 + 29096853-29097033,29097812-29098146,29098651-290987... 31 1.4
12_02_0559 - 20462217-20462780 30 2.4
12_02_0558 - 20453998-20454561 30 2.4
03_06_0327 - 33158131-33158315,33158586-33158639,33159149-331591... 30 2.4
05_04_0173 + 18724367-18724476,18724570-18724651,18724750-187248... 29 4.2
03_05_0521 + 25160245-25160883 29 4.2
01_02_0045 - 10576475-10577198,10578347-10578504 29 4.2
11_06_0481 + 24092574-24093962 29 5.5
08_02_1143 + 24659105-24659386,24660171-24660272,24661259-246615... 29 5.5
08_02_0570 - 18818175-18818609,18819681-18819689 29 5.5
07_03_1033 - 23417749-23418012,23418027-23418137 29 5.5
07_03_0493 + 18747427-18748356,18748594-18748697,18749586-187497... 29 5.5
07_01_0279 + 2055310-2055541,2055916-2056235,2056734-2057213 29 5.5
03_05_0951 + 29093962-29094373,29095291-29095388,29095689-290960... 29 5.5
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 29 5.5
02_05_0867 - 32338313-32338331,32338372-32338496,32338972-323391... 29 5.5
11_05_0077 - 18866707-18867334,18867410-18867555 29 7.3
07_03_1258 + 25244863-25245282,25246419-25246568,25246665-252468... 29 7.3
06_03_0790 - 24636805-24637770 29 7.3
03_02_0930 - 12480983-12481888 29 7.3
08_02_0763 + 20924057-20924848 28 9.7
05_01_0472 + 3772633-3773145 28 9.7
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 28 9.7
>10_08_0316 -
16688911-16689044,16689141-16689211,16689303-16689354,
16689589-16689685,16689764-16689841,16689938-16690054,
16690172-16690276,16691026-16691100,16691297-16691356,
16691454-16691549,16691838-16691954,16692142-16692260,
16692349-16692490,16694204-16694290,16694852-16694914,
16695081-16695161
Length = 497
Score = 99.1 bits (236), Expect = 5e-21
Identities = 51/102 (50%), Positives = 62/102 (60%)
Frame = +1
Query: 145 ENGVDPINGKELRVEDLXXXXXXXXXXXXXXSATSIPATLKSMQDEWDALMLHAFTQRQQ 324
++G P+ +EL ++D+ A SIP L Q+EWDA+ML +F QQ
Sbjct: 4 DHGKCPVTKEELTMDDIVAVKTNKVVKPRQLQAASIPGLLGMFQNEWDAIMLSSFALEQQ 63
Query: 325 LQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQ 450
L TARQELSHALYQHDAACRVIARL KE AR LA + Q
Sbjct: 64 LHTARQELSHALYQHDAACRVIARLKKERDEARALLAQAERQ 105
>08_02_1483 - 27451391-27451794,27451883-27452387
Length = 302
Score = 35.9 bits (79), Expect = 0.048
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +3
Query: 393 PTHKGGDGGARGPRHTETAGRHCSTPST--TPHGGVSRQCGSNRHVCGRGVSSAGARHRT 566
P H G GG G RH AG S+PST PHGG + GS+ GV++A A +
Sbjct: 227 PEHSSGGGGGMGGRHA-AAGEAGSSPSTAAAPHGG--GEGGSS------GVAAAAAAVSS 277
Query: 567 HAGTEAPRPHP 599
A P P P
Sbjct: 278 SAVVMDPYPTP 288
>03_01_0245 + 1916718-1917443,1917534-1917719
Length = 303
Score = 33.1 bits (72), Expect = 0.34
Identities = 40/156 (25%), Positives = 54/156 (34%), Gaps = 17/156 (10%)
Frame = +3
Query: 222 KAKTSKCHINPCHTEKHAR*VGRPDVTCL------HTETAVADC*TRIKSCIVP-TRRSV 380
+A+ C ++P ++HA R C+ H ++ C+ P SV
Sbjct: 3 RARGLSCLMSPLSGKRHAGDARRSSAACICCIGPHHKPSSAVGGGGGCVPCLAPHADHSV 62
Query: 381 -----SCDSPTHKGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRG--- 536
SC GGD RG T T+ R TP T R CG RG
Sbjct: 63 RAPLTSCCGSGGGGGDNNLRGRSSTTTSARTPRTPKTPCTPTARRLCGVRSRTPRRGQVG 122
Query: 537 --VSSAGARHRTHAGTEAPRPHPARGTAGTRADQSI 638
SSA A RT R RGT + + +
Sbjct: 123 CFQSSAPAAARTPRTPTTQRACYVRGTGTAQGNAKL 158
>03_01_0648 -
4749150-4749275,4749902-4749986,4750761-4750861,
4750933-4751191,4751382-4751434,4752828-4752990,
4753181-4754616
Length = 740
Score = 32.7 bits (71), Expect = 0.45
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +3
Query: 405 GGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVS 542
G GGARG H +G S+P+++ G + GS+R V GR S
Sbjct: 87 GQQGGARGAIHVPLSGGFASSPASSTSAGSAPSPGSDRFV-GRSPS 131
>07_01_1131 - 10510404-10511000
Length = 198
Score = 31.5 bits (68), Expect = 1.0
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +3
Query: 516 RHVCGRGVSSAGARHRTHAGTEAPRPHPA---RGTAGTRAD 629
RH C RG +S G R + AG + A GTAG RAD
Sbjct: 122 RHCCRRGCTSGGVRGKRRAGRGRGGDYDAGGGDGTAGRRAD 162
>01_06_1160 -
34996840-34996979,34997316-34997478,34997970-34998388,
34998413-34998620
Length = 309
Score = 31.5 bits (68), Expect = 1.0
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = +3
Query: 399 HKGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCG--SNRHV-CGRGVSSAGARHRTH 569
H G GG+ H +A + + P VSR G S R CGRG ++A A +
Sbjct: 85 HGRGVGGSGS--HHRSASQGGGSADLPPVRAVSRTLGLRSARPAPCGRGATAARANSSPY 142
Query: 570 AGTEAPRPHPARGTAGTRADQS 635
G + ARG G R Q+
Sbjct: 143 GGGRSAPAAGARGRGGGRGTQA 164
>05_07_0249 - 28659760-28659831,28660376-28660412,28660691-28660974
Length = 130
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = +3
Query: 372 RSVSCDSPTHKGGDGGARGPRHTETAG---RHCSTPSTTPHGGVSRQCGSN 515
R+ + P G GG G R + G R P TP GG R CG++
Sbjct: 16 RARAAGRPDLTPGGGGGSGARRSYGCGAGPRAAGWPDLTPGGGAKRSCGAD 66
>03_02_0730 + 10784784-10785341
Length = 185
Score = 31.1 bits (67), Expect = 1.4
Identities = 25/101 (24%), Positives = 36/101 (35%), Gaps = 4/101 (3%)
Frame = +3
Query: 372 RSVSCDSP--THKGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSS 545
R+ + SP T + G+G RGPR + +P P R+ S +C S
Sbjct: 35 RATNVISPPATWQPGEGDVRGPREVRMSSALSGSPPDPPRSPAEREL-SPSQICLELQSG 93
Query: 546 A--GARHRTHAGTEAPRPHPARGTAGTRADQSILTLASHPG 662
GAR R + R G RA + + G
Sbjct: 94 GRIGARRRLGVASTGARRRLGAAATGARAQLGVAAIRCEGG 134
>02_05_0447 +
29096853-29097033,29097812-29098146,29098651-29098782,
29098870-29099142,29099295-29099477
Length = 367
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -1
Query: 635 ALICSGASSPSGRVRPRRFRSCVSAVARSCRRDTTSADMPVAPALPADA 489
+L+ S +P R +PR R V+A A + RR +A +PA+ + A
Sbjct: 9 SLVLSSPPAPGARPQPRPARVSVAAAAPAARRGVVAAAAVSSPAVSSSA 57
>12_02_0559 - 20462217-20462780
Length = 187
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +3
Query: 402 KGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAG 551
+GG GG AGR T P G R+ G R GRG ++ G
Sbjct: 89 RGGGGGGDAGGGDGAAGRR--TVEAAPAAGGGRRQGRERRTAGRGAAAVG 136
>12_02_0558 - 20453998-20454561
Length = 187
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +3
Query: 402 KGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAG 551
+GG GG AGR T P G R+ G R GRG ++ G
Sbjct: 89 RGGGGGGDAGGGDGAAGRR--TVEAAPAAGGGRRQGRERRTAGRGAAAVG 136
>03_06_0327 -
33158131-33158315,33158586-33158639,33159149-33159180,
33159275-33159369,33159466-33159539,33159643-33159778,
33159874-33159937,33160017-33160079,33160160-33160299,
33160487-33160627,33160747-33160868,33160947-33161112,
33161194-33161313,33161580-33161651,33161787-33161843,
33162036-33162152,33162231-33162369,33162794-33162900,
33162972-33163081,33163172-33163305,33163397-33163546,
33163635-33163840,33166123-33166818
Length = 1059
Score = 30.3 bits (65), Expect = 2.4
Identities = 26/105 (24%), Positives = 37/105 (35%), Gaps = 4/105 (3%)
Frame = +3
Query: 387 DSPTHKGGDGGARGPRHTETAGRHCSTPSTTPHGGVSR----QCGSNRHVCGRGVSSAGA 554
D P GG GG P + +G P TP G + + G V G + +A
Sbjct: 24 DVPGRGGGGGGGGAPPYRPASGFVWPPPGMTPRPGPPQPQYPRPGPPAVVYGAPMPAAHH 83
Query: 555 RHRTHAGTEAPRPHPARGTAGTRADQSILTLASHPGLHQQCPGIY 689
+ G P P G A + +T+ + P H P Y
Sbjct: 84 QGAYQPGGVYRAPSPGVPVIGGYARSTPVTIRAPPPSHSSAPAPY 128
>05_04_0173 +
18724367-18724476,18724570-18724651,18724750-18724840,
18725060-18725172,18725270-18725342,18725445-18725565,
18725665-18725782,18726609-18726748,18726824-18726881,
18727007-18727077,18727181-18727733
Length = 509
Score = 29.5 bits (63), Expect = 4.2
Identities = 23/67 (34%), Positives = 25/67 (37%)
Frame = +3
Query: 420 ARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTHAGTEAPRPHP 599
A GP H R S P GG NR G G S A + G P P+P
Sbjct: 393 AAGPGHHYAKPRGPGGSSRYPQGGNQGGGYPNRGGQGGGGSYGNAPY-PQQGRGPPPPYP 451
Query: 600 ARGTAGT 620
G AGT
Sbjct: 452 GSGMAGT 458
>03_05_0521 + 25160245-25160883
Length = 212
Score = 29.5 bits (63), Expect = 4.2
Identities = 23/77 (29%), Positives = 27/77 (35%)
Frame = +3
Query: 375 SVSCDSPTHKGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGA 554
S+SC S HKG GG G R AG G + + V G G +AG
Sbjct: 18 SISCKSTRHKGRAGG--GGRAAAVAGAREPGKGAAVVAGARERVTA---VAGAGAPAAGV 72
Query: 555 RHRTHAGTEAPRPHPAR 605
R R R R
Sbjct: 73 RERRDEAAAVARAREPR 89
>01_02_0045 - 10576475-10577198,10578347-10578504
Length = 293
Score = 29.5 bits (63), Expect = 4.2
Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +3
Query: 399 HKGGDGGARGPRHTETAGRHCSTPSTTPHGGV--SRQCGSNRHVCGR-GVSSAGARHRTH 569
H G GGA P T A R ++ + G + GS R SSAG +
Sbjct: 75 HGRGSGGAGSP--TLGARRGSNSGARAGEGAALGASGAGSGRQGADPVSGSSAGEQDLGS 132
Query: 570 AGTEAPRPHPA----RGTAGTR 623
+G+ A RPHP+ RG GTR
Sbjct: 133 SGSAAGRPHPSMGERRGGGGTR 154
>11_06_0481 + 24092574-24093962
Length = 462
Score = 29.1 bits (62), Expect = 5.5
Identities = 26/88 (29%), Positives = 32/88 (36%), Gaps = 10/88 (11%)
Frame = +3
Query: 453 RHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSA---------GAR-HRTHAGTEAPRPHPA 602
R C TP P + + G GVSS+ G R HR T P P
Sbjct: 28 RPCWTPVAAPSSSGAARRGHGVSPWSLGVSSSTSSSSTPPHGRRCHRRGYYTGVALPAPV 87
Query: 603 RGTAGTRADQSILTLASHPGLHQQCPGI 686
RG + D L +HP + CP I
Sbjct: 88 RGIFVSYVDYDRTHLFAHPSITPACPAI 115
>08_02_1143 +
24659105-24659386,24660171-24660272,24661259-24661521,
24661775-24661874,24662080-24662238,24662327-24663147,
24663299-24663618,24665831-24667398
Length = 1204
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -3
Query: 243 GTWRFWLYYRWCFDLNKVLNSQLLAVNRIHAIFYYVLLNDSPF 115
G +RFWL + F + + +L +H FYYVL ++ +
Sbjct: 151 GHYRFWLLWNSAFRVT--YSRMMLYTTPVHGTFYYVLRYEAEY 191
>08_02_0570 - 18818175-18818609,18819681-18819689
Length = 147
Score = 29.1 bits (62), Expect = 5.5
Identities = 27/89 (30%), Positives = 32/89 (35%), Gaps = 7/89 (7%)
Frame = +3
Query: 264 EKHAR*VGRPDV-TCLHTETAVADC*TRIKSCIVPTRRSVSCDSPTHKGGDGGARG---- 428
EKHAR G +V T + AV + + C+ R C GG G RG
Sbjct: 5 EKHARGGGAEEVATGVGEAAAVVETEEAVVGCLPGGREGSRCRGQREGGGCCGGRGGGGR 64
Query: 429 --PRHTETAGRHCSTPSTTPHGGVSRQCG 509
R R GGV RQCG
Sbjct: 65 WSSRRVGGRRRLMIDVREASLGGVGRQCG 93
>07_03_1033 - 23417749-23418012,23418027-23418137
Length = 124
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 530 TWCLVCRSAPPHSRRNGSAEAAPCPRDCWH 619
+WC R A P S NG AE + WH
Sbjct: 6 SWCGSPRKATPSSGNNGKAENGVAKLEIWH 35
>07_03_0493 +
18747427-18748356,18748594-18748697,18749586-18749795,
18749992-18750597,18750819-18751095,18751163-18751310,
18751957-18752044,18752167-18752284
Length = 826
Score = 29.1 bits (62), Expect = 5.5
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = -1
Query: 623 SGASSPSGRVRPRRFRSC-VSAVARSCRRDTTSADMPVAPA-LPADASVGCGAWGAAMPA 450
+ A +P+ + + RR R +SA+A + R T A + P+ P+DAS G GA
Sbjct: 99 ASAEAPAPQEQRRRARDAELSALASATRPVTARAAVFREPSPAPSDASSGAGAGCGGGAG 158
Query: 449 CG 444
CG
Sbjct: 159 CG 160
>07_01_0279 + 2055310-2055541,2055916-2056235,2056734-2057213
Length = 343
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +3
Query: 468 PSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTHAGTEAPRPHPARGTAGTRADQSILT 644
P++ +GG S Q + H+ A P P PA AG DQS+L+
Sbjct: 249 PASNVNGGYSNQRYFQEQWNSSSNDNTTVFHQHAAAAPPPEPSPATAMAGFGHDQSVLS 307
>03_05_0951 +
29093962-29094373,29095291-29095388,29095689-29096087,
29096999-29097724,29097802-29097968,29098046-29098311,
29098396-29098581,29099072-29099346,29099435-29099683
Length = 925
Score = 29.1 bits (62), Expect = 5.5
Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 5/87 (5%)
Frame = +3
Query: 381 SCDSPTHKGGDGGARGPRHTETAGRHCSTPST-TPHGGVSRQCGSNRHV----CGRGVSS 545
S S H+GGD A PR G+ S S+ TP +++ + HV G +
Sbjct: 5 SSASAAHQGGDAPAEAPRRRGGGGKRKSGGSSFTPSKRHAKERNAAFHVPPHLLHSGPLT 64
Query: 546 AGARHRTHAGTEAPRPHPARGTAGTRA 626
AR H E A G G+ A
Sbjct: 65 RAARQSPHKLAEEAAAAAAAGAGGSEA 91
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 29.1 bits (62), Expect = 5.5
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +1
Query: 37 KMSLYCAISNXXXXXXXXSPTSGAVFERRIIEKYIIENGVDPINGKELRVEDL 195
++ YC G+VF+ I YI + G P+ G L+ EDL
Sbjct: 36 RLPFYCCALTFLPFEDPVCTADGSVFDLMSIIPYIKKFGKHPVTGTPLKQEDL 88
>02_05_0867 -
32338313-32338331,32338372-32338496,32338972-32339186,
32340043-32340086,32340187-32340548,32341357-32341650
Length = 352
Score = 29.1 bits (62), Expect = 5.5
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -1
Query: 566 SAVARSCRRDTTSADMPVAPALPADASVGCGA 471
S+ ARS T PV+PA PA +VG GA
Sbjct: 19 SSAARSFATGATRFPSPVSPASPAPGAVGGGA 50
>11_05_0077 - 18866707-18867334,18867410-18867555
Length = 257
Score = 28.7 bits (61), Expect = 7.3
Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +3
Query: 372 RSVSCDSPTHKGGDGGARGPR--HTETAGRHCSTPSTTPHGGVSRQCGSNR 518
R+V+ P GG GG G T G C+ P H G G+ R
Sbjct: 24 RAVAVPLPAAGGGGGGGGGEAGVRRRTRGTWCAAPDAVAHRGEDPGVGARR 74
>07_03_1258 +
25244863-25245282,25246419-25246568,25246665-25246877,
25246979-25247068,25247311-25247424,25247881-25248150,
25248251-25248407,25248691-25248741,25248742-25248819,
25249357-25249457,25249832-25250002,25250136-25250210,
25251527-25251793
Length = 718
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -1
Query: 344 SCLAVCNCCLC-VKACNIRASHSSCMLFSVAGIDVALG 234
S LA C CC+C +KACN + ++ V LG
Sbjct: 667 SRLADCLCCMCCIKACNKMNDQCAIVMTQVCAAFACLG 704
>06_03_0790 - 24636805-24637770
Length = 321
Score = 28.7 bits (61), Expect = 7.3
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +3
Query: 345 IKSCIVPTRRSVSCDSPTHKGGDGGARGPRH-TETAGRHCSTPSTTPHG 488
++ IVP S H GGDG G R T T G H S+ T P G
Sbjct: 272 VRQFIVPGPSICSSHRCKH-GGDGTGNGQRKITTTGGNHGSSGVTKPKG 319
>03_02_0930 - 12480983-12481888
Length = 301
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +3
Query: 462 STPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTHAGTEAPRPHPARGTAGTRA 626
+TPST G R ++R + G SS G +AGT P PA ++ A
Sbjct: 156 TTPSTRARGFHVRPTAASRRLRRVG-SSGGGHDSNNAGTPVSAPAPASSSSSVSA 209
>08_02_0763 + 20924057-20924848
Length = 263
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 540 SSAGARHRTHAGTEAPRPHPARGTAGTRADQSILTLAS 653
SSA AR+R H G+ P RG G D + AS
Sbjct: 194 SSARARNRDHDGSSPVAPMDERGRRGVELDWTAAAAAS 231
>05_01_0472 + 3772633-3773145
Length = 170
Score = 28.3 bits (60), Expect = 9.7
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Frame = +3
Query: 393 PTHKGGDGGARGPRHTETAGRHCSTPSTTP---HGGVSRQCGSNRHVCGRGVSSAGARHR 563
P K GG +GRH + P HGG R+ R V SS+ R R
Sbjct: 92 PDKKKKSGGGAAAATPAASGRHGKSKQAAPSSDHGGNGRR--HVRDVSSEKRSSSLHRRR 149
Query: 564 THAG--TEAPRPH 596
AG T A RPH
Sbjct: 150 MSAGSRTAAWRPH 162
>01_06_0823 +
32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 469 GVLQCRPAVSVWRGPLAPPSP 407
G+L C P VS RGP+ PP P
Sbjct: 873 GILPC-PPVSAHRGPVIPPPP 892
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,038,714
Number of Sequences: 37544
Number of extensions: 478917
Number of successful extensions: 2025
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2018
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2799822860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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