Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_D22
(829 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U04810-1|AAA79333.2| 778|Homo sapiens tastin protein. 35 0.31
BC032583-1|AAH32583.1| 778|Homo sapiens trophinin associated pr... 35 0.31
D83032-1|BAA11748.1| 1978|Homo sapiens nuclear protein, NP220 pr... 35 0.41
BX537425-1|CAD97667.1| 1978|Homo sapiens hypothetical protein pr... 35 0.41
BC083513-1|AAH83513.1| 1957|Homo sapiens ZNF638 protein protein. 35 0.41
BC024000-1|AAH24000.1| 814|Homo sapiens ZNF638 protein protein. 35 0.41
AF534078-1|AAM97681.1| 1139|Homo sapiens putative NP220 nuclear ... 35 0.41
AC007878-1|AAF66079.1| 792|Homo sapiens unknown protein. 35 0.41
AL137790-1|CAI18831.1| 635|Homo sapiens potassium voltage-gated... 33 0.95
BC117149-1|AAI17150.1| 1047|Homo sapiens ST18 protein protein. 32 2.9
BC117147-1|AAI17148.1| 1047|Homo sapiens ST18 protein protein. 32 2.9
AB011107-1|BAA25461.1| 1047|Homo sapiens KIAA0535 protein protein. 32 2.9
AK131081-1|BAC85131.1| 440|Homo sapiens FLJ00280 protein protein. 31 6.7
>U04810-1|AAA79333.2| 778|Homo sapiens tastin protein.
Length = 778
Score = 35.1 bits (77), Expect = 0.31
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Frame = +1
Query: 370 EKKIPYPV---KVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQT 540
E +IP P ++ VP+PYP + PL S C + +++ +P CP +
Sbjct: 530 EPEIPEPSLQEQLEVPEPYPPAEPRPLES---CCRSEPEIPESSRQEQLEVPEPCPPAEP 586
Query: 541 RPRQGIC--ARTLPRLKRKFMFQSKCTCP 621
RP + C +P R+ + CP
Sbjct: 587 RPLESYCRIEPEIPESSRQEQLEVPEPCP 615
>BC032583-1|AAH32583.1| 778|Homo sapiens trophinin associated
protein (tastin) protein.
Length = 778
Score = 35.1 bits (77), Expect = 0.31
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Frame = +1
Query: 370 EKKIPYPV---KVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQT 540
E +IP P ++ VP+PYP + PL S C + +++ +P CP +
Sbjct: 530 EPEIPEPSLQEQLEVPEPYPPAEPRPLES---CCRSEPEIPESSRQEQLEVPEPCPPAEP 586
Query: 541 RPRQGIC--ARTLPRLKRKFMFQSKCTCP 621
RP + C +P R+ + CP
Sbjct: 587 RPLESYCRIEPEIPESSRQEQLEVPEPCP 615
>D83032-1|BAA11748.1| 1978|Homo sapiens nuclear protein, NP220
protein.
Length = 1978
Score = 34.7 bits (76), Expect = 0.41
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +3
Query: 369 RKENPLPRESARSPTLPRLSNMSLTQLKRLSR--YQFTYRNPTQSKRRC---LTQYMSQS 533
RKEN PR + SP+ R S + R SR + YR ++S R C +++Y S+S
Sbjct: 478 RKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRS 537
Query: 534 TDPSPSR 554
SP R
Sbjct: 538 RSRSPYR 544
>BX537425-1|CAD97667.1| 1978|Homo sapiens hypothetical protein
protein.
Length = 1978
Score = 34.7 bits (76), Expect = 0.41
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +3
Query: 369 RKENPLPRESARSPTLPRLSNMSLTQLKRLSR--YQFTYRNPTQSKRRC---LTQYMSQS 533
RKEN PR + SP+ R S + R SR + YR ++S R C +++Y S+S
Sbjct: 478 RKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRS 537
Query: 534 TDPSPSR 554
SP R
Sbjct: 538 RSRSPYR 544
>BC083513-1|AAH83513.1| 1957|Homo sapiens ZNF638 protein protein.
Length = 1957
Score = 34.7 bits (76), Expect = 0.41
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +3
Query: 369 RKENPLPRESARSPTLPRLSNMSLTQLKRLSR--YQFTYRNPTQSKRRC---LTQYMSQS 533
RKEN PR + SP+ R S + R SR + YR ++S R C +++Y S+S
Sbjct: 478 RKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRS 537
Query: 534 TDPSPSR 554
SP R
Sbjct: 538 RSRSPYR 544
>BC024000-1|AAH24000.1| 814|Homo sapiens ZNF638 protein protein.
Length = 814
Score = 34.7 bits (76), Expect = 0.41
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +3
Query: 369 RKENPLPRESARSPTLPRLSNMSLTQLKRLSR--YQFTYRNPTQSKRRC---LTQYMSQS 533
RKEN PR + SP+ R S + R SR + YR ++S R C +++Y S+S
Sbjct: 478 RKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRS 537
Query: 534 TDPSPSR 554
SP R
Sbjct: 538 RSRSPYR 544
>AF534078-1|AAM97681.1| 1139|Homo sapiens putative NP220 nuclear
protein isoform protein.
Length = 1139
Score = 34.7 bits (76), Expect = 0.41
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +3
Query: 369 RKENPLPRESARSPTLPRLSNMSLTQLKRLSR--YQFTYRNPTQSKRRC---LTQYMSQS 533
RKEN PR + SP+ R S + R SR + YR ++S R C +++Y S+S
Sbjct: 478 RKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRS 537
Query: 534 TDPSPSR 554
SP R
Sbjct: 538 RSRSPYR 544
>AC007878-1|AAF66079.1| 792|Homo sapiens unknown protein.
Length = 792
Score = 34.7 bits (76), Expect = 0.41
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +3
Query: 369 RKENPLPRESARSPTLPRLSNMSLTQLKRLSR--YQFTYRNPTQSKRRC---LTQYMSQS 533
RKEN PR + SP+ R S + R SR + YR ++S R C +++Y S+S
Sbjct: 478 RKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRS 537
Query: 534 TDPSPSR 554
SP R
Sbjct: 538 RSRSPYR 544
>AL137790-1|CAI18831.1| 635|Homo sapiens potassium voltage-gated
channel, Shaw-related subfamily, member 4 protein.
Length = 635
Score = 33.5 bits (73), Expect = 0.95
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 10/99 (10%)
Frame = +3
Query: 309 LSLRKFPFPTPXEKHIPYPVRKENPL--------PRESARSPTLPRLSNMSLTQLKRLSR 464
L++ K P +KH+P P + E+P+ PR+S S T P + + KR
Sbjct: 481 LAMAKQKLPKKRKKHVPRPAQLESPMYCKSEETSPRDSTCSDTSPPAREEGMIERKRADS 540
Query: 465 YQFTYRNPTQSKRR--CLTQYMSQSTDPSPSRYMCQNLT 575
Q N S LTQ ++ S P R + ++ T
Sbjct: 541 KQNGDANAVLSDEEGAGLTQPLASSPTPEERRALRRSTT 579
>BC117149-1|AAI17150.1| 1047|Homo sapiens ST18 protein protein.
Length = 1047
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3
Query: 318 RKFPFPTPXEKHIPYPVRKENPLPRESARSPTLPRLSNMSLTQ 446
RK P P P KH P PV+ N LP A + + R S+ S Q
Sbjct: 524 RKTP-PFPESKHFPNPVKFPNRLPSAGAHTQSPGRASSYSYGQ 565
>BC117147-1|AAI17148.1| 1047|Homo sapiens ST18 protein protein.
Length = 1047
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3
Query: 318 RKFPFPTPXEKHIPYPVRKENPLPRESARSPTLPRLSNMSLTQ 446
RK P P P KH P PV+ N LP A + + R S+ S Q
Sbjct: 524 RKTP-PFPESKHFPNPVKFPNRLPSAGAHTQSPGRASSYSYGQ 565
>AB011107-1|BAA25461.1| 1047|Homo sapiens KIAA0535 protein protein.
Length = 1047
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3
Query: 318 RKFPFPTPXEKHIPYPVRKENPLPRESARSPTLPRLSNMSLTQ 446
RK P P P KH P PV+ N LP A + + R S+ S Q
Sbjct: 524 RKTP-PFPESKHFPNPVKFPNRLPSAGAHTQSPGRASSYSYGQ 565
>AK131081-1|BAC85131.1| 440|Homo sapiens FLJ00280 protein protein.
Length = 440
Score = 30.7 bits (66), Expect = 6.7
Identities = 22/66 (33%), Positives = 27/66 (40%)
Frame = +1
Query: 379 IPYPVKVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQTRPRQGI 558
+P P + P P T P P GT TLP+ + P T PS +T P
Sbjct: 226 LPPPRTLPSPGTLPPSGTLPPPGTVPTPGTLPSPGTLPAPRTLPTPGTLPSPRTLP---- 281
Query: 559 CARTLP 576
RTLP
Sbjct: 282 TPRTLP 287
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,539,671
Number of Sequences: 237096
Number of extensions: 1892718
Number of successful extensions: 5068
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5009
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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