Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_D22
         (829 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41017-1|AAC48211.1|  343|Caenorhabditis elegans Hypothetical pr...    31   1.3  
U63744-1|AAC47308.1|  572|Caenorhabditis elegans p21-activated k...    29   4.1  
U29612-10|AAA68805.2|  572|Caenorhabditis elegans P21-activated ...    29   4.1  
U29612-9|AAL65775.1|  569|Caenorhabditis elegans P21-activated k...    29   4.1  
D83215-1|BAA11844.1|  569|Caenorhabditis elegans protein kinase ...    29   4.1  
AC084154-11|AAK29874.1|  350|Caenorhabditis elegans Hypothetical...    29   5.4  

>U41017-1|AAC48211.1|  343|Caenorhabditis elegans Hypothetical
           protein T26C11.2 protein.
          Length = 343

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +2

Query: 338 PXRKAHPLPG*KRKSPTP*KCTFPNPTPXVKHVPYPVKEIVKVPVH 475
           P  K  P+P  K K P P    FP P P  K +P+P      +P H
Sbjct: 180 PKPKPKPMPKHKPK-PFPKPMLFPKPMPIPKPMPFPKPMPKPMPKH 224



 Score = 30.3 bits (65), Expect = 1.8
 Identities = 18/73 (24%), Positives = 29/73 (39%)
 Frame = +1

Query: 373 KKIPYPVKVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQTRPRQ 552
           K +P P+  H P+P+P     P P          +    P  K   +P   P  + +P+ 
Sbjct: 215 KPMPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMPKPKPKPKPMPKPKPKLKLKPKP 274

Query: 553 GICARTLPRLKRK 591
               +  P+LK K
Sbjct: 275 MPFPKPKPKLKPK 287



 Score = 29.9 bits (64), Expect = 2.3
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 338 PXRKAHPLPG*KRKSPTP*KCTFPNPTPXVKHVPYPVKEIVKVPV 472
           P  K  P+P  K K P P    FP P P  K +P+P   +   P+
Sbjct: 108 PFPKPKPMPKHKPK-PFPKPMLFPKPMPIPKPMPFPKPMLFPKPM 151



 Score = 29.5 bits (63), Expect = 3.1
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +2

Query: 356 PLPG*KRKS-PTP*KCTFPNPTPXVKHVPYPVKEIVKVP 469
           P+P  K KS P P    FP P P  KH P P  + +  P
Sbjct: 92  PMPKSKPKSEPFPNPMPFPKPKPMPKHKPKPFPKPMLFP 130



 Score = 28.3 bits (60), Expect = 7.1
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = +2

Query: 338 PXRKAHPLPG*KRKSPTP*KCTFPNPTPXVKHVPYPVKEIVKVPV 472
           P  K  P+P  K K P P    FP P P  K  P+P   +   P+
Sbjct: 44  PKPKPKPMPKHKPK-PFPKPMLFPKPMPKHKPKPFPKPMLFPKPM 87



 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +3

Query: 324 FPFPTPXEKHIPYPVRKENPLPRESARSPTLPRL 425
           FP P P  K +P P  K  P+P+   +    P L
Sbjct: 31  FPSPMPFPKPMPKPKPKPKPMPKHKPKPFPKPML 64


>U63744-1|AAC47308.1|  572|Caenorhabditis elegans p21-activated
           kinase CePAK protein.
          Length = 572

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 315 LRKFPFPTPXEKHIPYPVRKENPLPRESARSPTLPRLSNMSLT 443
           L K P  T  +K +P P  K+N   +E++  P + R SN   T
Sbjct: 34  LPKEPEATKKKKTMPNPFMKKNKDKKEASEKPVISRPSNFEHT 76


>U29612-10|AAA68805.2|  572|Caenorhabditis elegans P21-activated
           kinase family protein1, isoform a protein.
          Length = 572

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 315 LRKFPFPTPXEKHIPYPVRKENPLPRESARSPTLPRLSNMSLT 443
           L K P  T  +K +P P  K+N   +E++  P + R SN   T
Sbjct: 34  LPKEPEATKKKKTMPNPFMKKNKDKKEASEKPVISRPSNFEHT 76


>U29612-9|AAL65775.1|  569|Caenorhabditis elegans P21-activated
           kinase family protein1, isoform b protein.
          Length = 569

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 315 LRKFPFPTPXEKHIPYPVRKENPLPRESARSPTLPRLSNMSLT 443
           L K P  T  +K +P P  K+N   +E++  P + R SN   T
Sbjct: 34  LPKEPEATKKKKTMPNPFMKKNKDKKEASEKPVISRPSNFEHT 76


>D83215-1|BAA11844.1|  569|Caenorhabditis elegans protein kinase
           protein.
          Length = 569

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 315 LRKFPFPTPXEKHIPYPVRKENPLPRESARSPTLPRLSNMSLT 443
           L K P  T  +K +P P  K+N   +E++  P + R SN   T
Sbjct: 34  LPKEPEATKKKKTMPNPFMKKNKDKKEASEKPVISRPSNFEHT 76


>AC084154-11|AAK29874.1|  350|Caenorhabditis elegans Hypothetical
           protein Y22D7AR.1 protein.
          Length = 350

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = +2

Query: 338 PXRKAHPLPG*KRKS-PTP*KCTFPNPTPXVKHVPYPVKEIVKVPVH 475
           P  K  P P  K KS P P     P P P  K  P P+ E+   P H
Sbjct: 247 PKPKPEPKPKTKLKSEPKPKPKLKPKPKPNPKPEPNPMPELKPKPKH 293


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,133,776
Number of Sequences: 27780
Number of extensions: 263767
Number of successful extensions: 961
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)