Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_D18
(847 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 35 0.084
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 32 0.59
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 32 0.59
U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81079-3|CAB03083.2| 588|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 29 3.1
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 4.2
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 29 4.2
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 29 4.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 9.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 9.6
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 28 9.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 9.6
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 34.7 bits (76), Expect = 0.084
Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 1/155 (0%)
Frame = +2
Query: 350 PYPVEKKIPYPVKVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPTRQ 529
P P K P P+ H P+P+P P P + + P +P P +
Sbjct: 40 PMPKPKPKPKPMPKHKPKPFPKPMLFPKPMPKHKPKPFPKPMLFPK----PMPFPKPMPK 95
Query: 530 TRPRQGICARTLPRLKRKFMFQSK-CTCPLLTQ*RKKYLTP*RFPYMCLLLTPYTKRYKY 706
++P+ +P K K M + K P K P P+ +L P K +
Sbjct: 96 SKPKSEPFPNPMPFPKPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMLFP--KPMPF 153
Query: 707 XKGPCGQTLPRAYPKPXPYPSXXPSIPGXKXXPTP 811
K P ++ P++ P P P P P +P K P P
Sbjct: 154 PK-PMPKSKPKSEPFPNPMPFPKP-MPKPKPKPKP 186
Score = 34.3 bits (75), Expect = 0.11
Identities = 33/156 (21%), Positives = 56/156 (35%), Gaps = 2/156 (1%)
Frame = +2
Query: 350 PYPVEKKIPYPVKVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPTRQ 529
P P+ K +P+P + P+P P + P + + P K P P +
Sbjct: 132 PMPIPKPMPFPKPMLFPKPMPFPKPMPKSKPKSEPFPNPMPFPKPMPKPKPKPKPMPKHK 191
Query: 530 TRP--RQGICARTLPRLKRKFMFQSKCTCPLLTQ*RKKYLTP*RFPYMCLLLTPYTKRYK 703
+P + + + +P + + F P+ K + P FP + P
Sbjct: 192 PKPFPKPMLFPKPMP-IPKPMPFPKPMPKPMPKHKPKPFPKPMLFPKPMPIPKPM----- 245
Query: 704 YXKGPCGQTLPRAYPKPXPYPSXXPSIPGXKXXPTP 811
P + +P+ PKP P P P + K P P
Sbjct: 246 ----PFPKPMPKPKPKPKPMPKPKPKLK-LKPKPMP 276
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/78 (25%), Positives = 31/78 (39%)
Frame = +2
Query: 350 PYPVEKKIPYPVKVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPTRQ 529
P P K +P P+ H P+P+P P P + P K +P P +
Sbjct: 210 PMPFPKPMPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMPKPKPKPKPMPKPKPKLK 269
Query: 530 TRPRQGICARTLPRLKRK 583
+P+ + P+LK K
Sbjct: 270 LKPKPMPFPKPKPKLKPK 287
Score = 29.5 bits (63), Expect = 3.1
Identities = 35/157 (22%), Positives = 52/157 (33%), Gaps = 2/157 (1%)
Frame = +2
Query: 347 IPYPVEKKIPYPVKVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPTR 526
+P K P+P + P+P P + P P + + P P P
Sbjct: 21 MPKSKPKSEPFPSPMPFPKPMPKPKPKPKPMPKHKPKPFPKPMLFPKPMPKHKPKPFPKP 80
Query: 527 QTRPRQGICARTLPRLKRKF-MFQSKCTCPLLTQ*RKKYLTP*RFPYMCLLLTPYTKRYK 703
P+ + +P+ K K F + P K P P + P K
Sbjct: 81 MLFPKPMPFPKPMPKSKPKSEPFPNPMPFPKPKPMPKHKPKPFPKPMLFPKPMPIPKPMP 140
Query: 704 YXKGPCGQTLPRAYPKPXPYPSXXP-SIPGXKXXPTP 811
+ K P +PKP P+P P S P + P P
Sbjct: 141 FPK-------PMLFPKPMPFPKPMPKSKPKSEPFPNP 170
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 31.9 bits (69), Expect = 0.59
Identities = 36/146 (24%), Positives = 49/146 (33%), Gaps = 1/146 (0%)
Frame = +2
Query: 350 PYPVEKKIPYPVKVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPTRQ 529
P P K P P P P P + P P + + P K P+ P +
Sbjct: 181 PDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPE 240
Query: 530 TRPRQGICARTLPRLKRKFMFQSKCTCPLLTQ*RKKYLTP*RFPYMCLLLTPYTKRYKYX 709
+P+ + P+ K K + K P L K P P L P K
Sbjct: 241 PKPKPKPKPKPEPKPKTKLKSEPK-PKPKLKPKPKPNPKPEPNPMPELKPKPKHKPNSRP 299
Query: 710 K-GPCGQTLPRAYPKPXPYPSXXPSI 784
K P + PR+ P P P P P +
Sbjct: 300 KPNPRPKPKPRSKPNPKPKPRPKPEL 325
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 31.9 bits (69), Expect = 0.59
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 319 SRSLPRRKAHPLPGRKENPLPRESARSPTLPRLSNMSLTQLKR 447
S S PRR+ P ++ PR + RSP+ PR +S + ++R
Sbjct: 88 SASPPRRRRDDSPRKRSRSPPRRTRRSPSPPRRRRISRSPVRR 130
Score = 28.3 bits (60), Expect = 7.3
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Frame = +1
Query: 325 SLPRRKAHPL-------PGRKENPLPRESARSPTLPRLSNMSLTQLKRLSRYQFTYRNPT 483
S P+RK P+ P R+ + PR+ +RSP + S + +R+S R+P
Sbjct: 75 SPPKRKREPIRAPSASPPRRRRDDSPRKRSRSPPRRTRRSPSPPRRRRIS------RSPV 128
Query: 484 QSKRRCLTQYMSHSTDPSPSR 546
+ R + +S S P P R
Sbjct: 129 RRSRSPPRRQVSRSRSPPPRR 149
>U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical
protein F35A5.5 protein.
Length = 125
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 350 PYPVEKKIPYPVKVHVPQPYPXCQTCPLP 436
P PV +P PV V +P P P P+P
Sbjct: 12 PVPVPAPVPQPVPVPMPMPMPMPMPMPVP 40
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 347 IPYPVEKKIPYPVKVHVPQPYPXCQTCPLPS*RDC 451
+P PV + +P P+ + +P P P P+P +C
Sbjct: 15 VPAPVPQPVPVPMPMPMPMPMPMPVPVPVPVQSNC 49
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 350 PYPVEKKIPYPVKVHVPQPYPXCQTCPLP 436
P P+ P PV VPQP P P+P
Sbjct: 4 PIPIPIPAPVPVPAPVPQPVPVPMPMPMP 32
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +2
Query: 347 IPYPVEKKIPYPVKVHVPQPYPXCQTCPLP 436
IP PV P P V VP P P P+P
Sbjct: 9 IPAPVPVPAPVPQPVPVPMPMPMPMPMPMP 38
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 347 IPYPVEKKIPYPVKVHVPQPYPXCQTCPLP 436
IP P+ +P P V P P P P+P
Sbjct: 5 IPIPIPAPVPVPAPVPQPVPVPMPMPMPMP 34
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 347 IPYPVEKKIPYPVKVHVPQPYPXCQTCPLP 436
IP P +P PV VP P P P+P
Sbjct: 7 IPIPAPVPVPAPVPQPVPVPMPMPMPMPMP 36
>Z81079-3|CAB03083.2| 588|Caenorhabditis elegans Hypothetical
protein F39H11.3 protein.
Length = 588
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/65 (27%), Positives = 24/65 (36%)
Frame = +2
Query: 356 PVEKKIPYPVKVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPTRQTR 535
PV + P P PQ Y Q P+ G S P + GA+P P
Sbjct: 478 PVGRYAPMPPPYGAPQDYHPQQGPPMVQMMQQPGPSGYYPQRPGQPTGAVPGPGPQGYMN 537
Query: 536 PRQGI 550
P+ G+
Sbjct: 538 PQMGM 542
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 347 IPYPVEKKIPYPVKVHVPQPYP 412
+P PV ++P P++V VP P P
Sbjct: 156 VPVPVPVQVPVPIRVPVPVPVP 177
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/77 (27%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Frame = +2
Query: 350 PYPVEKKIPYPVKVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPTR- 526
P P P P P P C+ P+P CQ ++ PS + + PT
Sbjct: 114 PAPAAPCCP-PPPPPTPSPLVCCKQAPVPENPCCQIVAAAMPPPPSAPACCVAAPVPTNP 172
Query: 527 --QTRPRQGICARTLPR 571
Q PR C + PR
Sbjct: 173 CCQPAPRPAPCVCSAPR 189
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 29.1 bits (62), Expect = 4.2
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +1
Query: 334 RRKAHPLPGRKENPL--PRESARSP--TLPRLSNMSLTQLKRLSRYQFTYRNPTQSKRRC 501
+R+ P P R+ P PR+ +RSP PR S + ++LSR + R ++S RR
Sbjct: 153 KRRRSPSPKRRRRPSEKPRKRSRSPRRERPRSPKRSREESRKLSRKPSSSR--SKSPRRS 210
Query: 502 LTQYMSHSTDPSPSR 546
+ PS SR
Sbjct: 211 REDPRKVARKPSRSR 225
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 29.1 bits (62), Expect = 4.2
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +1
Query: 334 RRKAHPLPGRKENPL--PRESARSP--TLPRLSNMSLTQLKRLSRYQFTYRNPTQSKRRC 501
+R+ P P R+ P PR+ +RSP PR S + ++LSR + R ++S RR
Sbjct: 153 KRRRSPSPKRRRRPSEKPRKRSRSPRRERPRSPKRSREESRKLSRKPSSSR--SKSPRRS 210
Query: 502 LTQYMSHSTDPSPSR 546
+ PS SR
Sbjct: 211 REDPRKVARKPSRSR 225
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 746 PKPXPYPSXXPSIPGXKXXPTPXX*XCXPXP 838
P P P P P I G P P C P P
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 746 PKPXPYPSXXPSIPGXKXXPTPXX*XCXPXP 838
P P P P P I G P P C P P
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/73 (24%), Positives = 26/73 (35%)
Frame = +2
Query: 350 PYPVEKKIPYPVKVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPTRQ 529
P P + PV P P P + P P+ Q A P+ +E P++ P +
Sbjct: 655 PAPAAAEYAAPVAEETPAPAPAAEETPAPA----QAAEETPAPAPAAEE--TPASAPAAE 708
Query: 530 TRPRQGICARTLP 568
P A P
Sbjct: 709 ETPAPAPAAEEAP 721
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 746 PKPXPYPSXXPSIPGXKXXPTPXX*XCXPXP 838
P P P P P I G P P C P P
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,472,613
Number of Sequences: 27780
Number of extensions: 278974
Number of successful extensions: 1178
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -