Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_D17
         (839 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1165 - 9267891-9268145,9268395-9268510,9268991-9269127,926...    30   2.0  
07_03_0156 - 14524757-14526403                                         29   6.1  

>01_01_1165 -
           9267891-9268145,9268395-9268510,9268991-9269127,
           9269645-9269808,9269892-9269972,9270783-9270962,
           9271489-9271929,9273234-9273344,9274355-9274463,
           9274618-9274643,9274823-9274903,9275013-9275211,
           9275374-9275449,9275553-9275769,9276117-9276155,
           9276684-9276783,9276962-9277084,9277171-9277895
          Length = 1059

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 16/66 (24%), Positives = 31/66 (46%)
 Frame = -2

Query: 232 VNHSTEDHLTTTSIKNRLSIKXXMFXXCTYIKMTLSXWWAALDLSETY*TRNMVFTATTD 53
           V++  EDHL   S +N+ S+K  +   C Y++  +    +   LS      NM + +  +
Sbjct: 458 VSNDLEDHLEKNSEENKESVKPTLLWSCVYVQEIIQG-TSGTALSCPIPDENMDYRSILE 516

Query: 52  TDMLEW 35
           +  + W
Sbjct: 517 STKMPW 522


>07_03_0156 - 14524757-14526403
          Length = 548

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 132 RYQXGGQHSTYQKRTRHVIWFSPQQRIRT 46
           R + G + S Y+K  R V+W SP   +RT
Sbjct: 481 RRKEGSKESEYKKGLRPVLWLSPNFPLRT 509


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,891,409
Number of Sequences: 37544
Number of extensions: 267173
Number of successful extensions: 376
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 376
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)