Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_D14
(865 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 32 0.46
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 32 0.46
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 32 0.61
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.1
U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated ... 30 1.9
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 30 2.4
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 29 3.2
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 29 4.3
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 5.7
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 29 5.7
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 29 5.7
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 29 5.7
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 28 7.5
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 28 7.5
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 28 7.5
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 28 7.5
Z50756-4|CAA90639.1| 482|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z50741-5|CAA90612.1| 482|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 28 9.9
U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protei... 28 9.9
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 28 9.9
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 28 9.9
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -3
Query: 638 PXPRARHAEIEASAXELPP-RQDAAPPWSGDRIATRNPQRAPPLPGPREASQXARTPPR 465
P P + A + + + PP RQ+ P +++ +APP P P++A + PP+
Sbjct: 358 PAPPVQQAPPKPTPQQAPPVRQNPPMPAVQQAPSSQQATQAPPKPAPQQAPPVQQNPPK 416
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 593 ELPPRQDAAPPWSGDRIATRNPQRAPPLPGPREASQXARTPPR 465
+ PP Q A P + + TR APP P P++A + PP+
Sbjct: 302 QTPPVQQAPPKPAVQQAPTRAAP-APPKPAPQQAPPVQQNPPK 343
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = -3
Query: 638 PXPRARHAEIEASAXELPPRQDAAPPWSGDRIATRNPQRAPPLPGPREASQXARTPP--- 468
P + + A+ + + PP Q A+P + + +APP P ++A + PP
Sbjct: 207 PPSQPQQAQAQPVVQQAPPVQQASPKPVAQPVQQQPVVQAPPKPIVQQAPVVQQAPPPKQ 266
Query: 467 -RTRRCGIHEPP*PQSRAADVATP 399
+ + + +PP P + P
Sbjct: 267 QQAQAQPVQQPPNPAPVVQQASAP 290
Score = 27.9 bits (59), Expect = 9.9
Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 8/76 (10%)
Frame = -3
Query: 632 PRARHAEIEASAXELPPRQDA----APPWSGDRIATRNP---QRAPPLPGPREASQX-AR 477
P A+ + A P Q APP + P +APP P +A Q A
Sbjct: 66 PAAQQIPVVQQAPPAQPAQQKPVAQAPPAQAKPTVQQAPILVAQAPPNPPAPQAQQHQAP 125
Query: 476 TPPRTRRCGIHEPP*P 429
PP R+ + +PP P
Sbjct: 126 APPAARQIPVQQPPKP 141
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 32.3 bits (70), Expect = 0.46
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Frame = -3
Query: 638 PXPRARHAEIEASAXELPPR---QDAAPPWSGDRIATRNPQRAPPLPGPREASQXARTPP 468
P P R S P R + +PP R + + ++PP P P+ A +++PP
Sbjct: 314 PPPARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPP-PAPKRAKSRSKSPP 372
Query: 467 RTRR---CGIHEPP*PQSR 420
RR PP P+ R
Sbjct: 373 ARRRRSPSASKSPPAPRRR 391
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = -3
Query: 536 RNPQRAPPLPGPREASQXARTPP---RTRRCGIHEPP*PQSRAADVATPQ--RCRGSGRG 372
R+P + P P+ A +++PP R R + P P+ R + +PQ R R S G
Sbjct: 413 RSPSASKSPPAPKRAKSRSKSPPAPRRRRSPSQSKSPAPRRRRSPSKSPQAPRRRRSPSG 472
Query: 371 T-TREPR 354
+ +R PR
Sbjct: 473 SKSRSPR 479
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 31.9 bits (69), Expect = 0.61
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = -3
Query: 587 PPRQDAAPPWSGDRIATRNPQRAPPLPGP-REASQXARTP-PRTRRCGIHEPP*PQSRAA 414
PP APP + +APP P +E + A P P PP P++ A
Sbjct: 184 PPPTTKAPPPPTTKAPPPPTTKAPPPPTTNKEVTTVAPVPKPAPVTAPAPNPPAPENTTA 243
Query: 413 DVATPQRCRGSGRGTTREPRTVPS 342
V T + + + T P VPS
Sbjct: 244 KVETTKPTKAAPPAPTPVPNPVPS 267
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/68 (32%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Frame = -3
Query: 587 PPRQDAAPPWSGDRIATRNPQRAPPLP---GPREASQXARTPPRTRRCGIHEPP*PQSRA 417
PP PP + RNP R PP P P + R R RR +H P P R
Sbjct: 164 PPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPPRLNSHDRRALRARRPMVHRPA-PYGRR 222
Query: 416 ADVATPQR 393
+ P R
Sbjct: 223 SISQGPGR 230
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/57 (31%), Positives = 21/57 (36%)
Frame = -3
Query: 638 PXPRARHAEIEASAXELPPRQDAAPPWSGDRIATRNPQRAPPLPGPREASQXARTPP 468
P PR A + PPR PP P R PP+ P + RTPP
Sbjct: 126 PPPRKSRAGGSSPPPPPPPRVPRTPP------PRSPPPRRPPMTPPSPQRRPPRTPP 176
>U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated
protein 11, isoform c protein.
Length = 657
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = -3
Query: 641 RPXPRARHAEIEASAXELPPRQDAAP--PWSGDRIATRNPQ--RAPPLPGPREASQXART 474
+P P+ A A+ + PP Q AP P + A PQ APP+P P ASQ A
Sbjct: 433 QPAPQHSAAPFYANLHQAPPMQSQAPNEPENPFITAPAAPQMHNAPPVP-PPPASQGAPA 491
Query: 473 P 471
P
Sbjct: 492 P 492
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 29.9 bits (64), Expect = 2.4
Identities = 30/90 (33%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = -3
Query: 608 EASAXELPPRQDA-APPWSGDRIATRNPQRAPPLPGPREASQXARTPPRTRRCGIHEPP* 432
+A+ P RQD PP SG P+ + PG R A R PP TR PP
Sbjct: 270 DANYCPCPQRQDDRTPPSSGTSAPQPPPRGSTAAPGTR-APPATRAPPATR-----APP- 322
Query: 431 PQSRAADVATPQRCRGSGRGTTREPRTVPS 342
+RA T R + + REP T S
Sbjct: 323 ATTRAPPATT--RPAPASQPPVREPETPDS 350
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 29.5 bits (63), Expect = 3.2
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = -3
Query: 626 ARHAEIEASAXELPPRQDA--APPWSGDRIATRNPQRAPPLPGPREASQXARTPPRTRRC 453
A+H +I AS+ PP+ A AP +A R A P R S A TRR
Sbjct: 211 AKHYKIGASSTSAPPKTTAAGAPKRPSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270
Query: 452 GIHEPP*PQSRAADVA 405
P P++ A VA
Sbjct: 271 -----PSPKAPVASVA 281
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = -3
Query: 632 PRARHAEIEASAXELPPRQDA-APPWSGDRIATRNPQRAPPLPGPREASQXARTPPRTRR 456
PR R + PPR+ +P R +R+P R P R+ S+ PPR ++
Sbjct: 92 PRRRRDDSPRKRSRSPPRRTRRSPSPPRRRRISRSPVRRSRSPPRRQVSRSRSPPPRRQQ 151
Query: 455 CGIHEPP 435
PP
Sbjct: 152 RSRSPPP 158
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Frame = -3
Query: 584 PRQDAAPPWSGDRIATRNPQRAPPLPGPREASQXARTPPRTRRCGIHE--PP*PQSRAAD 411
P PP G + N PP+PG S A TPP G+ PP P D
Sbjct: 501 PNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPLD 560
Query: 410 V 408
+
Sbjct: 561 L 561
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -3
Query: 605 ASAXELPPRQDAAPPWSGDRIATRNPQRAPPLPGPREASQXARTPP 468
A + P PP I RNP PPL P + + AR PP
Sbjct: 956 AQSTRSPALPPPVPPREAPPIPKRNP---PPLGAPPKVPEGARAPP 998
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -3
Query: 605 ASAXELPPRQDAAPPWSGDRIATRNPQRAPPLPGPREASQXARTPP 468
A + P PP I RNP PPL P + + AR PP
Sbjct: 956 AQSTRSPALPPPVPPREAPPIPKRNP---PPLGAPPKVPEGARAPP 998
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -3
Query: 605 ASAXELPPRQDAAPPWSGDRIATRNPQRAPPLPGPREASQXARTPP 468
A + P PP I RNP PPL P + + AR PP
Sbjct: 956 AQSTRSPALPPPVPPREAPPIPKRNP---PPLGAPPKVPEGARAPP 998
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -1
Query: 439 RPDRNRALRTSQRRN---VVAGQGVAPHGSPVQCHRPH 335
RP + + +Q+RN V QGVAPH P Q PH
Sbjct: 280 RPANAQLAQNAQQRNPQQVPMPQGVAPHHIPPQALGPH 317
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -1
Query: 439 RPDRNRALRTSQRRN---VVAGQGVAPHGSPVQCHRPH 335
RP + + +Q+RN V QGVAPH P Q PH
Sbjct: 280 RPANAQLAQNAQQRNPQQVPMPQGVAPHHIPPQALGPH 317
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = -3
Query: 587 PPRQDAAPPWSGDRIATRNPQRAPPLPGPREASQXARTPPRTRRCGIHEPP*PQ 426
PP Q PP R P +A P PGP PP ++ G PP PQ
Sbjct: 695 PPGQPYGPPGGYPPQQQRPPYQAQPYPGP---------PPPQQQRGYGYPPPPQ 739
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = -3
Query: 587 PPRQDAAPPWSGDRIATRNPQRAPPLPGPREASQXARTPPRTRRCGIHEPP*PQ 426
PP Q PP R P +A P PGP PP ++ G PP PQ
Sbjct: 695 PPGQPYGPPGGYPPQQQRPPYQAQPYPGP---------PPPQQQRGYGYPPPPQ 739
>Z50756-4|CAA90639.1| 482|Caenorhabditis elegans Hypothetical
protein T08D10.1 protein.
Length = 482
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Frame = -3
Query: 530 PQRAP-PLPGPREASQXARTPPRTRRCGI----HEPP*PQSRAADVATPQ 396
P R P PLPGPR +PP T + H+PP +S+ + Q
Sbjct: 48 PIRRPVPLPGPRFVKDVNPSPPATSSPNVQTQCHQPPVVRSQTHQASVSQ 97
>Z50741-5|CAA90612.1| 482|Caenorhabditis elegans Hypothetical
protein T08D10.1 protein.
Length = 482
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Frame = -3
Query: 530 PQRAP-PLPGPREASQXARTPPRTRRCGI----HEPP*PQSRAADVATPQ 396
P R P PLPGPR +PP T + H+PP +S+ + Q
Sbjct: 48 PIRRPVPLPGPRFVKDVNPSPPATSSPNVQTQCHQPPVVRSQTHQASVSQ 97
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = -3
Query: 557 SGDRIATRNPQRAPPLPG--PREASQXARTPPRTRRCGIHEPP*PQSRAADVATPQR 393
S R +R Q P P R +SQ R+P + R E P R+ +TP+R
Sbjct: 1468 SASRPESRINQMKYPAPRLVERSSSQNVRSPRKARNIEADETTPPSKRSNSASTPKR 1524
>U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protein
15, isoform b protein.
Length = 777
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -3
Query: 590 LPPRQDAAPPWS--GDRIATRNP-QRAPPLPGPREASQXARTPPRT 462
L P Q +PP + G+ A P RAP P P+ S AR PP T
Sbjct: 80 LQPSQFHSPPCTTAGNTPAGGTPGYRAPVPPDPQPTSAQARNPPVT 125
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +2
Query: 320 LYT--GVVWSMALYGAPVWCHALTRDNVAALRRPQRAIAVRAVRG 448
LYT ++ ALYGAP W L+ N+ L R+ A+RA G
Sbjct: 683 LYTTQALIKPTALYGAPAWTSLLSDTNLEKLEIAYRS-ALRACVG 726
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 27.9 bits (59), Expect = 9.9
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = -3
Query: 626 ARHAEIEASAXELPPRQDA-APPWSGDRIATRNPQRAPPLPGPREASQXARTPPRTRRCG 450
A+H +I +S+ PP+ A AP +A R A P R S A TRR
Sbjct: 208 AKHYKIGSSSTSAPPKTAAGAPKRLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA- 266
Query: 449 IHEPP*PQSRAADVA 405
P P++ A VA
Sbjct: 267 ----PSPKAPVAPVA 277
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,137,261
Number of Sequences: 27780
Number of extensions: 331230
Number of successful extensions: 1140
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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