Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_D14
         (865 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    25   0.90 
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    25   0.90 
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   6.3  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   8.4  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 25.0 bits (52), Expect = 0.90
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -2

Query: 132 VGPLRRRSPGPMKQQGLFLNVTYV-NNCWR 46
           +GPLR R P P++     LN T + N+C++
Sbjct: 72  IGPLRFRKPLPIEPWHGVLNATVLPNSCYQ 101



 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 448 STNRPDRNRALRTSQRRNV 392
           S  RP R  A+ +SQR NV
Sbjct: 15  SCTRPSRGNAVPSSQRGNV 33


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 25.0 bits (52), Expect = 0.90
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -2

Query: 132 VGPLRRRSPGPMKQQGLFLNVTYV-NNCWR 46
           +GPLR R P P++     LN T + N+C++
Sbjct: 72  IGPLRFRKPLPIEPWHGVLNATVLPNSCYQ 101



 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 448 STNRPDRNRALRTSQRRNV 392
           S  RP R  A+ +SQR NV
Sbjct: 15  SCTRPSRGNAVPSSQRGNV 33


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 632 PRARHAEIEASAXELPPRQDAAPP 561
           PR ++A    +  E PP  D  PP
Sbjct: 645 PRVQNATDTTNFDEYPPDSDPPPP 668


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 181 YLGLVLDGRWSFRAHFERLGPRIDGGRRLAES 276
           +  L+ D    FR H + L PR++    +  S
Sbjct: 717 FSSLLSDTEQHFRQHRDSLSPRVENRSAIVHS 748


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,486
Number of Sequences: 438
Number of extensions: 4333
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)