Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_D12
         (830 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL133215-11|CAI10925.1|  684|Homo sapiens progressive external o...    38   0.059
AL133215-10|CAI10924.1|  582|Homo sapiens progressive external o...    38   0.059
AF292005-1|AAK69559.1|  582|Homo sapiens truncated putative T7-l...    38   0.059
AF292004-1|AAK69558.1|  684|Homo sapiens putative T7-like mitoch...    38   0.059
U83115-1|AAB53791.1| 1637|Homo sapiens non-lens beta gamma-cryst...    31   5.1  
AL390074-1|CAH72091.1| 1723|Homo sapiens absent in melanoma 1 pr...    31   5.1  
AL359292-2|CAI21046.1| 1723|Homo sapiens absent in melanoma 1 pr...    31   5.1  

>AL133215-11|CAI10925.1|  684|Homo sapiens progressive external
           ophthalmoplegia 1 protein.
          Length = 684

 Score = 37.5 bits (83), Expect = 0.059
 Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
 Frame = +3

Query: 129 TLVFSDIP--KITVTEIRKVLRQKGFAVQDGFXXXXXXXXXXXXEQNCEDSKV------Y 284
           TL   D+P   +T TEIR+ LR  G   QDG              Q    + V      +
Sbjct: 44  TLQALDMPVLPVTATEIRQYLRGHGIPFQDGHSCLRALSPFAESSQLKGQTGVTTSFSLF 103

Query: 285 INKTTGYFLCSKCNLHGDW 341
           I+KTTG+FLC      G W
Sbjct: 104 IDKTTGHFLCMTSLAEGSW 122


>AL133215-10|CAI10924.1|  582|Homo sapiens progressive external
           ophthalmoplegia 1 protein.
          Length = 582

 Score = 37.5 bits (83), Expect = 0.059
 Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
 Frame = +3

Query: 129 TLVFSDIP--KITVTEIRKVLRQKGFAVQDGFXXXXXXXXXXXXEQNCEDSKV------Y 284
           TL   D+P   +T TEIR+ LR  G   QDG              Q    + V      +
Sbjct: 44  TLQALDMPVLPVTATEIRQYLRGHGIPFQDGHSCLRALSPFAESSQLKGQTGVTTSFSLF 103

Query: 285 INKTTGYFLCSKCNLHGDW 341
           I+KTTG+FLC      G W
Sbjct: 104 IDKTTGHFLCMTSLAEGSW 122


>AF292005-1|AAK69559.1|  582|Homo sapiens truncated putative T7-like
           mitochondrial DNA helicase protein.
          Length = 582

 Score = 37.5 bits (83), Expect = 0.059
 Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
 Frame = +3

Query: 129 TLVFSDIP--KITVTEIRKVLRQKGFAVQDGFXXXXXXXXXXXXEQNCEDSKV------Y 284
           TL   D+P   +T TEIR+ LR  G   QDG              Q    + V      +
Sbjct: 44  TLQALDMPVLPVTATEIRQYLRGHGIPFQDGHSCLRALSPFAESSQLKGQTGVTTSFSLF 103

Query: 285 INKTTGYFLCSKCNLHGDW 341
           I+KTTG+FLC      G W
Sbjct: 104 IDKTTGHFLCMTSLAEGSW 122


>AF292004-1|AAK69558.1|  684|Homo sapiens putative T7-like
           mitochondrial DNA helicase protein.
          Length = 684

 Score = 37.5 bits (83), Expect = 0.059
 Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
 Frame = +3

Query: 129 TLVFSDIP--KITVTEIRKVLRQKGFAVQDGFXXXXXXXXXXXXEQNCEDSKV------Y 284
           TL   D+P   +T TEIR+ LR  G   QDG              Q    + V      +
Sbjct: 44  TLQALDMPVLPVTATEIRQYLRGHGIPFQDGHSCLRALSPFAESSQLKGQTGVTTSFSLF 103

Query: 285 INKTTGYFLCSKCNLHGDW 341
           I+KTTG+FLC      G W
Sbjct: 104 IDKTTGHFLCMTSLAEGSW 122


>U83115-1|AAB53791.1| 1637|Homo sapiens non-lens beta gamma-crystallin
            like protein protein.
          Length = 1637

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +3

Query: 399  IDKLQNDTASFKNEWENVIKDTMSMSALNETELLDLFRLYEF-PFHSEAGKTLAE 560
            + KL+ND     N  E+VIK  +   A ++T+ + LF+   + P  S +G +L++
Sbjct: 865  LSKLKNDDMEKANHIESVIKSNLPNCANSDTDFMGLFKSSRYDPSISFSGMSLSD 919


>AL390074-1|CAH72091.1| 1723|Homo sapiens absent in melanoma 1
            protein.
          Length = 1723

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +3

Query: 399  IDKLQNDTASFKNEWENVIKDTMSMSALNETELLDLFRLYEF-PFHSEAGKTLAE 560
            + KL+ND     N  E+VIK  +   A ++T+ + LF+   + P  S +G +L++
Sbjct: 951  LSKLKNDDMEKANHIESVIKSNLPNCANSDTDFMGLFKSSRYDPSISFSGMSLSD 1005


>AL359292-2|CAI21046.1| 1723|Homo sapiens absent in melanoma 1
            protein.
          Length = 1723

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +3

Query: 399  IDKLQNDTASFKNEWENVIKDTMSMSALNETELLDLFRLYEF-PFHSEAGKTLAE 560
            + KL+ND     N  E+VIK  +   A ++T+ + LF+   + P  S +G +L++
Sbjct: 951  LSKLKNDDMEKANHIESVIKSNLPNCANSDTDFMGLFKSSRYDPSISFSGMSLSD 1005


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,908,601
Number of Sequences: 237096
Number of extensions: 1508050
Number of successful extensions: 3248
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3244
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)