Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_D12
         (830 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr...    32   0.44 
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p...    32   0.44 
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.      32   0.44 
AF022984-1|AAB69953.1|  540|Caenorhabditis elegans Hypothetical ...    29   5.4  
Z81077-4|CAB03071.3|  618|Caenorhabditis elegans Hypothetical pr...    28   9.4  
U97010-1|AAB52322.1|  334|Caenorhabditis elegans Hypothetical pr...    28   9.4  

>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical
           protein C35C5.1 protein.
          Length = 2962

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +3

Query: 441 WENVIK--DTMSMSALNETELLDLFRLYEFPFHSEAGKTLAEVRVSADRTVLY 593
           WEN     D   +    +  L+D+F L  FP ++E  +  + +RV+ D+T++Y
Sbjct: 488 WENKFPEYDESGICCPRKRYLVDMFNLICFPLYTEYEQWESRLRVAFDKTIVY 540


>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
           protein C35C5.1 protein.
          Length = 2962

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +3

Query: 441 WENVIK--DTMSMSALNETELLDLFRLYEFPFHSEAGKTLAEVRVSADRTVLY 593
           WEN     D   +    +  L+D+F L  FP ++E  +  + +RV+ D+T++Y
Sbjct: 488 WENKFPEYDESGICCPRKRYLVDMFNLICFPLYTEYEQWESRLRVAFDKTIVY 540


>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
          Length = 2962

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +3

Query: 441 WENVIK--DTMSMSALNETELLDLFRLYEFPFHSEAGKTLAEVRVSADRTVLY 593
           WEN     D   +    +  L+D+F L  FP ++E  +  + +RV+ D+T++Y
Sbjct: 488 WENKFPEYDESGICCPRKRYLVDMFNLICFPLYTEYEQWESRLRVAFDKTIVY 540


>AF022984-1|AAB69953.1|  540|Caenorhabditis elegans Hypothetical
           protein ZK488.6 protein.
          Length = 540

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
 Frame = +3

Query: 339 WTIL----ERIVKKAKVEVSIKDYIDKLQNDTAS---FKNEWENVIKDTMSMSAL-NETE 494
           WT L    ER+  K+    ++ DY+D +Q+D+ S   F+ +W  V+K   + +   NET+
Sbjct: 344 WTALIDIDERLEMKSDKFKTVVDYLDSIQDDSISSLRFRVKW--VMKHNYTPARYENETQ 401

Query: 495 LLDLFRLYEFPFHSEAGK 548
           L      +++   S+ G+
Sbjct: 402 LQSEMIFHKYQNTSQLGR 419


>Z81077-4|CAB03071.3|  618|Caenorhabditis elegans Hypothetical
           protein F36A2.4 protein.
          Length = 618

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +3

Query: 369 AKVEVSIKDYIDKLQNDTASFKNEWENV 452
           AK+E + KDY+DKL +     +++++NV
Sbjct: 53  AKIEQNAKDYVDKLWSVAKRDRDKYKNV 80


>U97010-1|AAB52322.1|  334|Caenorhabditis elegans Hypothetical
           protein W08A12.4 protein.
          Length = 334

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
 Frame = +3

Query: 348 LERIVKKAKVEVSIKDYIDKLQNDTASFKNEWENVIKDTMSMSALNETELL--DLFRLYE 521
           LE + + AK+E   K+  D+L  +T  F+N   N    +  + +L E  L   + FR  +
Sbjct: 73  LEELRRSAKIENDRKNREDELAIETMKFENSQRNTEVYSPYLDSLKEKSLKQDEQFRNNK 132

Query: 522 FPF-HSEAGKTLAEVRVSADRTV 587
             F + E  +TL   +   + T+
Sbjct: 133 IRFKNEEMDRTLKYQQAQEEHTL 155


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,077,288
Number of Sequences: 27780
Number of extensions: 270441
Number of successful extensions: 753
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)