Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_D11
(828 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0521 - 22904656-22904962,22905132-22905340,22905432-229055... 50 2e-06
05_06_0213 + 26414613-26414695,26416907-26417077,26417983-264182... 47 2e-05
03_01_0265 + 2046918-2049102,2052385-2052452,2052542-2052652,205... 46 4e-05
03_02_0058 - 5316112-5316418,5316497-5316705,5316773-5316859,531... 37 0.017
01_06_0491 - 29763738-29764044,29764266-29764474,29764565-297646... 36 0.052
01_01_1200 - 9670109-9670165,9670569-9670664,9670886-9670969,967... 35 0.091
03_01_0005 + 46370-46454,46962-47071,47381-47545,47672-48463,487... 31 1.5
12_02_1123 - 26250300-26250362,26251988-26252042,26252128-262522... 30 2.0
01_01_1166 + 9287840-9288040,9289752-9289799,9292166-9292282,929... 29 4.5
12_01_0767 - 6956758-6957138,6957491-6957581,6957796-6957861,695... 29 6.0
08_02_1207 - 25302186-25302275,25303089-25303141,25303400-253037... 29 6.0
11_06_0513 + 24466131-24469487 28 7.9
06_03_0399 - 20403488-20405092 28 7.9
>01_05_0521 -
22904656-22904962,22905132-22905340,22905432-22905521,
22905624-22905734,22906401-22906468,22906611-22906653
Length = 275
Score = 50.4 bits (115), Expect = 2e-06
Identities = 35/98 (35%), Positives = 50/98 (51%)
Frame = +2
Query: 110 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSK 289
MAP Y D+GKK D+ + Y K L T + GV T+ T ES VFG L ++
Sbjct: 1 MAPGLYTDIGKKTRDLLYRDYGTH-HKFTLTTCTPEGVTITAAGTRKNES--VFGELQTQ 57
Query: 290 FAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTL 403
+K+ LT K N+++ L T +T+ + GLK L
Sbjct: 58 --LKNKKLTVDVKANSESDLLTTVTVDEFGTPGLKSIL 93
Score = 44.4 bits (100), Expect = 1e-04
Identities = 30/123 (24%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Frame = +3
Query: 435 KTGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNF 614
++GKL+ + ++ +N ++ L+ + P+V+++ V + GV FDT + F+K N
Sbjct: 101 RSGKLELQYLHEYAGINASVGLN-SNPMVNLSGVFGSKELSVGVDVAFDTATSNFTKYNA 159
Query: 615 ALGYQSGDF--ALHTNVDNGKDFGGSIYQKVS--DKLDCGVSMKWTAGSADTLFGVGAKY 782
AL + D +LH N ++G S Y V G + + ++ G+++
Sbjct: 160 ALSLTNSDLIASLHLN-NHGDTLIASYYHLVKHHSNTAVGAELSHSFSRNESTLIFGSQH 218
Query: 783 ALD 791
+LD
Sbjct: 219 SLD 221
>05_06_0213 +
26414613-26414695,26416907-26417077,26417983-26418219,
26418543-26418572,26419248-26419282,26421680-26421747,
26423067-26423126,26423310-26423399,26423487-26423695,
26424083-26424383
Length = 427
Score = 47.2 bits (107), Expect = 2e-05
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Frame = +3
Query: 435 KTGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNF 614
K+ K + + + +N + L+ A P+V + V + G FDT F+K N
Sbjct: 255 KSAKAEVQYLHPHAGLNAIVGLN-ANPLVSFSGVFGTGAFAVGTDVAFDTATGDFTKYNA 313
Query: 615 ALGYQSGDFALHTNVDN-GKDFGGSIYQKVSDKLDCGVSMKWTAGSADTLFGVGAKYALD 791
L + + D ++N G S Y KVS G + + S + G ++ALD
Sbjct: 314 GLSHTTPDLTAALLLNNKGDSLAASYYHKVSKTSAVGAELAHSFSSNENTLTFGTQHALD 373
Query: 792 Q 794
+
Sbjct: 374 E 374
>03_01_0265 + 2046918-2049102,2052385-2052452,2052542-2052652,
2053164-2053250,2053476-2053684,2054115-2054340,
2054473-2054510,2054657-2054714,2055363-2055662,
2055832-2055903,2055988-2056112,2056240-2056312,
2056417-2056521
Length = 1218
Score = 46.0 bits (104), Expect = 4e-05
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
Frame = +3
Query: 435 KTGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNF 614
K+GKL + +D A+N+ + L + P++++AA + AG FD+ A +K N
Sbjct: 814 KSGKLDLQYLHDHFALNSTIGLT-STPLIELAATIGTNELSAGAEVGFDSTSASVTKYNS 872
Query: 615 ALGYQSGDF-ALHTNVDNGKDFGGSIYQKVSDKLDCGVSMKWT--AGSADTLFGVGAKYA 785
+ Y DF A D G+ S ++ V+ + T + + F +G+ +A
Sbjct: 873 GICYNKHDFSAAVLLADKGETLKASYIHTFNETNGATVAAEVTHKLKTKENYFTIGSSHA 932
Query: 786 LDQXAFCTPR 815
+D R
Sbjct: 933 IDSSTLLKTR 942
>03_02_0058 -
5316112-5316418,5316497-5316705,5316773-5316859,
5316945-5317055,5317536-5317643,5319082-5319149,
5319269-5319320
Length = 313
Score = 37.1 bits (82), Expect = 0.017
Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Frame = +3
Query: 438 TGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFA 617
+GK++ + ++ + T + + PVV+ + QG G FDT KF+K + A
Sbjct: 140 SGKVEMQYFHENASFATAVGMK-PSPVVEFSGTAGAQGLAFGAEAGFDTATGKFTKYSAA 198
Query: 618 LGYQSGDF-ALHTNVDNGKDFGGSIYQKVSDKLDCGVSMKWT--AGSADTLFGVGAKYAL 788
+G D+ A D G S + DK V + T + + VG Y +
Sbjct: 199 IGVTKPDYHAAIVLADKGDTVKVSGVYHLDDKQKSSVVAELTRRLSTNENTLTVGGLYKV 258
Query: 789 D 791
D
Sbjct: 259 D 259
>01_06_0491 -
29763738-29764044,29764266-29764474,29764565-29764654,
29764819-29764905,29765598-29765733,29766036-29766186,
29766334-29766502
Length = 382
Score = 35.5 bits (78), Expect = 0.052
Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Frame = +3
Query: 441 GKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFAL 620
GK + + +D ++ + L + P+V+++ V + G DT F+K + L
Sbjct: 210 GKAELQYLHDYAGISLGVGLT-SKPLVNLSGVFGNKSVAVGADVAVDTSTGDFTKYDAGL 268
Query: 621 GYQSGDFALHTNVDN-GKDFGGSIYQKVSDK--LDCGVSMKWTAGSADTLFGVGAKYALD 791
+ D A ++N G S Y V+ + G + + + + G ++ALD
Sbjct: 269 TINNSDLAADLTLNNKGDSLTASYYHLVNKESGTAAGAELTHSFSTKENTLSFGMQHALD 328
>01_01_1200 -
9670109-9670165,9670569-9670664,9670886-9670969,
9671050-9671118,9671892-9671993,9672807-9672872,
9673791-9673841,9673953-9674048,9674141-9674279,
9674343-9674424,9674528-9674723
Length = 345
Score = 34.7 bits (76), Expect = 0.091
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +3
Query: 582 TQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSDKLDCGVSMKWTAGSADTL 761
T + +S+ F+ Y+ DF + N +GG+ Q V+ L G W +
Sbjct: 173 TNEPHYSQGMFSFDYKGKDFRSQFQLGNNAFYGGNYIQSVTKNLSLGTEAFWLGQQRKSG 232
Query: 762 FGVGAKY 782
G A+Y
Sbjct: 233 VGFVARY 239
>03_01_0005 +
46370-46454,46962-47071,47381-47545,47672-48463,
48730-48840,48935-49195,49415-49638,49735-49855,
50673-51214,51302-51488,51569-51895,52047-52197,
52287-52424,52918-53013,53276-53357,54411-54679,
54769-54882,55050-55288,55488-55715,55799-55951,
56479-56616,57061-57188,57598-57718,58142-58306,
59486-59633,59772-59898,60025-60118,60119-60268,
60577-60624,60712-60819,61040-61114,61225-61275,
61341-61487,61584-61714,61944-62031,62204-62266,
62336-62582,62830-62981,63056-63126,63214-63370,
63520-63687
Length = 2323
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -1
Query: 597 TLLFVYQTGCVHQPANPGSLVLL 529
TLLFVYQTG P PG L+LL
Sbjct: 693 TLLFVYQTGEDPPPPAPGGLLLL 715
>12_02_1123 -
26250300-26250362,26251988-26252042,26252128-26252224,
26252364-26253048,26253354-26253721,26253931-26254074,
26254925-26255276
Length = 587
Score = 30.3 bits (65), Expect = 2.0
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 119 PYYADLGKKANDVFSKGYHFGVFKLDLKTKS--ESGVEFTSGITSNQESGKVFGSLSSKF 292
P Y G + D+ SK +H LDL S + G++F SG+ S + V L+ +
Sbjct: 261 PQYVH-GTQLPDLESKFFH-----LDLMHPSVYKVGLQFLSGVISGGNACCVAMLLAFRE 314
Query: 293 AVKDYGLTFTEKWNTDNT 346
A+KDY T+ N D T
Sbjct: 315 AIKDYSTPSTKTLNRDLT 332
>01_01_1166 +
9287840-9288040,9289752-9289799,9292166-9292282,
9293018-9293700,9295214-9297190,9298330-9298441,
9299848-9299904
Length = 1064
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 690 YQKVSDKLDCGVSMKWTAGSADTLFGVG 773
+QKV D+LDCG+ + T G + +G
Sbjct: 469 WQKVCDRLDCGLEINNTVGGMRKILSLG 496
>12_01_0767 -
6956758-6957138,6957491-6957581,6957796-6957861,
6958079-6958194
Length = 217
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 698 GI*QAGLRRQHEVDG-GFGRHIIRSWSEVRAGPXR 799
G+ QAG RR+ V G GFG W E R G R
Sbjct: 167 GLAQAGHRREAVVVGDGFGTEAAPHWGEARGGRER 201
>08_02_1207 -
25302186-25302275,25303089-25303141,25303400-25303788,
25303968-25304338,25304362-25304502
Length = 347
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 609 CSWRTLLFVYQTGCVHQPANPGSLVLLQRLQLD 511
CSW + + TG V P+ G L LLQ +QL+
Sbjct: 34 CSWDSGIICSDTGHVPIPSALGDLPLLQTIQLE 66
>11_06_0513 + 24466131-24469487
Length = 1118
Score = 28.3 bits (60), Expect = 7.9
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = -1
Query: 666 HCLRLCGEQSHQIGNLEQS-CSWRTLLFVYQTGC---VHQPANPGSLVLLQRLQLD 511
H LR IG L S CS R L + + C P N GS+ LQRL L+
Sbjct: 686 HSLRYLNLSQTDIGKLPDSICSLRLLQTLQLSRCEKLTKLPQNIGSVTSLQRLDLE 741
>06_03_0399 - 20403488-20405092
Length = 534
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/59 (22%), Positives = 29/59 (49%)
Frame = +3
Query: 528 AAVLNYQGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVS 704
AA + GW+ GV+ + + +K + + + Y+ D ++ + D G + Y+K +
Sbjct: 439 AAAAKHMGWIRGVYGEMEPYVSKNPRGAY-VNYRDLDLGVNDDGDGGGGVARARYEKAT 496
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,633,067
Number of Sequences: 37544
Number of extensions: 512352
Number of successful extensions: 1394
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1393
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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