Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_D11
         (828 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58746-2|AAB00622.2|  283|Caenorhabditis elegans Hypothetical pr...   108   4e-24
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr...    32   0.44 
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ...    32   0.44 
U41264-7|AAA82427.2|  819|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z99709-1|CAB16858.1|  488|Caenorhabditis elegans Hypothetical pr...    29   4.1  
AC024813-5|AAK27883.1|  255|Caenorhabditis elegans Hypothetical ...    29   4.1  
AC024813-4|AAK27882.1|  297|Caenorhabditis elegans Hypothetical ...    29   4.1  
U39644-2|AAA80360.2|  966|Caenorhabditis elegans Hypothetical pr...    29   5.4  
Z81528-8|CAB04288.2|  643|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z81554-1|CAB04506.1|  838|Caenorhabditis elegans Hypothetical pr...    28   9.4  

>U58746-2|AAB00622.2|  283|Caenorhabditis elegans Hypothetical
           protein R05G6.7 protein.
          Length = 283

 Score =  108 bits (260), Expect = 4e-24
 Identities = 51/106 (48%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
 Frame = +2

Query: 110 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESG--VEFTSGITSNQESGKVFGSLS 283
           MAPP +ADLGK A D+F+KGY+FG  K+D  T++     VEF S  + N  SGK+ G+L 
Sbjct: 1   MAPPTFADLGKSAKDLFNKGYNFGFLKIDSTTRAGDNKEVEFKSAASHNIGSGKLGGNLD 60

Query: 284 SKFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLGRHFCP 421
            K+ +  YG+T TEKWNT+N L T I + ++   GLKVTL   + P
Sbjct: 61  VKYKIPQYGITLTEKWNTENQLGTVIEVNEQFGRGLKVTLDSLYAP 106



 Score = 89.4 bits (212), Expect = 3e-18
 Identities = 41/131 (31%), Positives = 67/131 (51%)
 Frame = +3

Query: 393 KSPLEGTFAPQTGTKTGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHT 572
           K  L+  +AP  G ++GK+K  +   T  V  ++ +  A PV++ A V +  GWL G   
Sbjct: 97  KVTLDSLYAPHAGKRSGKVKLDWALPTARVTADVGVTSA-PVINAAGVFSRDGWLIGAAA 155

Query: 573 QFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSDKLDCGVSMKWTAGSA 752
            FD+   K +  + A G+ +  + LH+ V N  DFG S+Y KV+  ++ G  + W  G  
Sbjct: 156 TFDSSSNKLAATSLAFGHSTPQYTLHSFVINSTDFGASLYHKVASNVEVGTQLGWKVGGN 215

Query: 753 DTLFGVGAKYA 785
              + +  KYA
Sbjct: 216 GADYALATKYA 226


>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical protein
            T08A11.1 protein.
          Length = 1872

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +2

Query: 203  TKSESGVEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATD 358
            T+S  G         + +S    G+ S K+ V  +G T  EKWN D  + TD
Sbjct: 1044 TRSRRGANMEDDRKHSSKSNSA-GNASKKYKVWAWGSTGEEKWNVDMEIGTD 1094


>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
            protein T08A11.1 protein.
          Length = 1872

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +2

Query: 203  TKSESGVEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATD 358
            T+S  G         + +S    G+ S K+ V  +G T  EKWN D  + TD
Sbjct: 1044 TRSRRGANMEDDRKHSSKSNSA-GNASKKYKVWAWGSTGEEKWNVDMEIGTD 1094


>U41264-7|AAA82427.2|  819|Caenorhabditis elegans Hypothetical
           protein F10E7.4 protein.
          Length = 819

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +3

Query: 561 GVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSDKLDCGVSMKWT 740
           G   QF+T++    K     GY+    +L  N    +DFG +      +++DC VS KWT
Sbjct: 657 GNRNQFETEEE--CKQICLPGYEKSK-SLIPNNQLLEDFGNTEVDDGGERVDCEVS-KWT 712

Query: 741 A-GSADTLFGVGAK 779
           A GS     G G K
Sbjct: 713 AWGSCSVSCGRGKK 726


>Z99709-1|CAB16858.1|  488|Caenorhabditis elegans Hypothetical
           protein C47B2.1 protein.
          Length = 488

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 19/62 (30%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
 Frame = +2

Query: 266 VFGSLSSKFAVKDYGLTFTEKWNTDNTL--ATDITIQDKIAAGLKV-TLGRHFCPTDWN* 436
           VFGSL+      DYG  F   W     L     + I  K      +  LG   C  DW  
Sbjct: 58  VFGSLNIILRCNDYGSHFLSTWCAYRALYFTRKVEIFTKFTGKFVILPLGNVICQNDWLI 117

Query: 437 NW 442
           +W
Sbjct: 118 SW 119


>AC024813-5|AAK27883.1|  255|Caenorhabditis elegans Hypothetical
           protein Y54F10AL.1b protein.
          Length = 255

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +2

Query: 221 VEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 361
           +E   G+ S  E+ K+F   +S+  ++ + LTF  +W   + L T I
Sbjct: 184 LEGGGGVASQSETRKIF-LFTSRIFIEAFSLTFVAEWGDRSQLTTII 229


>AC024813-4|AAK27882.1|  297|Caenorhabditis elegans Hypothetical
           protein Y54F10AL.1a protein.
          Length = 297

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +2

Query: 221 VEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 361
           +E   G+ S  E+ K+F   +S+  ++ + LTF  +W   + L T I
Sbjct: 184 LEGGGGVASQSETRKIF-LFTSRIFIEAFSLTFVAEWGDRSQLTTII 229


>U39644-2|AAA80360.2|  966|Caenorhabditis elegans Hypothetical protein
            T10E10.4 protein.
          Length = 966

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 6/67 (8%)
 Frame = -1

Query: 807  CRTRXGPARTSLQLRIMCRPNPPSTSC*RRS-----PACQIPSGRLNRRNLY-HCLRLCG 646
            CR +  P     Q  I C+   P+T C ++      P CQ  +G L    LY  C   C 
Sbjct: 874  CRMKLWPGEYGCQTDIECQSRCPNTYCEKKKSDKNVPQCQCTNGML----LYGRCFSQCP 929

Query: 645  EQSHQIG 625
               H+ G
Sbjct: 930  RGFHESG 936


>Z81528-8|CAB04288.2|  643|Caenorhabditis elegans Hypothetical
           protein F35E2.9 protein.
          Length = 643

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 18/65 (27%), Positives = 29/65 (44%)
 Frame = +3

Query: 579 DTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSDKLDCGVSMKWTAGSADT 758
           D    K S + F   + S    +H N+       GS+++  + KL  G S K      +T
Sbjct: 455 DENSIKRSDSGFDAYFFSHSIWMHKNITVNMSTSGSLFKDPNSKL-YGTSTK-IVNDKET 512

Query: 759 LFGVG 773
           +FG+G
Sbjct: 513 VFGIG 517


>Z81554-1|CAB04506.1|  838|Caenorhabditis elegans Hypothetical
           protein F57G4.1 protein.
          Length = 838

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +2

Query: 266 VFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 361
           VFG LSS     DYG+T   K+ TD      I
Sbjct: 252 VFGELSSSKKTIDYGITKQWKYRTDGRFELSI 283


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,603,823
Number of Sequences: 27780
Number of extensions: 425860
Number of successful extensions: 1093
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)