Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_D07
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical pr...    76   3e-14
Z93375-4|CAB07562.2|  647|Caenorhabditis elegans Hypothetical pr...    51   9e-07
AF068718-4|AAC17765.1|   98|Caenorhabditis elegans Hypothetical ...    35   0.066
Z79603-2|CAB01893.4|  500|Caenorhabditis elegans Hypothetical pr...    31   1.4  
U41022-1|AAA82338.3|  303|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z92833-9|CAD54141.2|  665|Caenorhabditis elegans Hypothetical pr...    30   2.5  
AL023842-11|CAD54168.2|  665|Caenorhabditis elegans Hypothetical...    30   2.5  
Z81568-15|CAB04595.2|  610|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z81568-14|CAB04591.2|  608|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z68760-13|CAD30434.1|  423|Caenorhabditis elegans Hypothetical p...    29   4.4  
AL032641-7|CAD30455.1|  423|Caenorhabditis elegans Hypothetical ...    29   4.4  
Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical
           protein F26D10.9a protein.
          Length = 613

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 29/58 (50%), Positives = 43/58 (74%)
 Frame = +3

Query: 288 GMTREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVIVRAPKCGPPEPRTWYE 461
           G+T+E++ KY +DPFW  +R  LFVLFW+AW+ M AGAIA++V +PKC   +   W++
Sbjct: 43  GLTKEQLEKYRNDPFWKPVRTILFVLFWLAWVLMFAGAIAIVVLSPKCAEKQKPDWWQ 100


>Z93375-4|CAB07562.2|  647|Caenorhabditis elegans Hypothetical
           protein C38C6.2 protein.
          Length = 647

 Score = 51.2 bits (117), Expect = 9e-07
 Identities = 20/58 (34%), Positives = 35/58 (60%)
 Frame = +3

Query: 288 GMTREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVIVRAPKCGPPEPRTWYE 461
           G++ +E+ ++ +DP W  +R  LFVLFW+ WL + A AI ++  +P C       W++
Sbjct: 78  GLSEQELEQFRNDPCWKFIRTVLFVLFWLIWLALFAVAILLVCFSPTCVLRAKPNWWQ 135


>AF068718-4|AAC17765.1|   98|Caenorhabditis elegans Hypothetical
           protein R01B10.3 protein.
          Length = 98

 Score = 35.1 bits (77), Expect = 0.066
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +3

Query: 288 GMTREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVIV 416
           G + +E+    ++P W   R++   +FW  W  +LAG+I +IV
Sbjct: 35  GYSLDELNAKREEPKWRVARYTAIAMFWGIWGALLAGSILIIV 77


>Z79603-2|CAB01893.4|  500|Caenorhabditis elegans Hypothetical
           protein M163.2 protein.
          Length = 500

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -2

Query: 452 CPGFGRAALGCAYNDCNSPGEHAQPGHPEQHEQR 351
           C  FG  A  CAY D +S  +H +  HPE H  +
Sbjct: 351 CCDFGSCA--CAYTDPSSLRKHVKSKHPEHHAMK 382


>U41022-1|AAA82338.3|  303|Caenorhabditis elegans Hypothetical
           protein K08B5.2 protein.
          Length = 303

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -2

Query: 332 EGIVSILQYLLSRHPSELPFISIEFNLRVTIPVVPDDIFRIGHVHP 195
           E +  +LQYLL         +  +FN+R++ P +P  I +    HP
Sbjct: 184 ETVSKVLQYLLENEIYLTKCVKAKFNVRLSSPDIPHLIMKFIECHP 229


>Z92833-9|CAD54141.2|  665|Caenorhabditis elegans Hypothetical
           protein F38A6.3d protein.
          Length = 665

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 3/103 (2%)
 Frame = -2

Query: 494 IDQVQSDQGTEFVPCPGFGR---AALGCAYNDCNSPGEHAQPGHPEQHEQRPTQVHPEGI 324
           I+    D  TE +   G        L   YN+        + G  E+H +  T     G 
Sbjct: 436 IEDCDMDSDTESIEDSGLAPEFDVDLAPIYNEKMEVDGEDEDGGEEEHVRTATMTFCNGF 495

Query: 323 VSILQYLLSRHPSELPFISIEFNLRVTIPVVPDDIFRIGHVHP 195
            +  Q L  RH +     S + N R+++P+ P     I H+ P
Sbjct: 496 FATSQALRRRHATGQRTASGQPNRRISVPLWPRRTSWIRHLVP 538


>AL023842-11|CAD54168.2|  665|Caenorhabditis elegans Hypothetical
           protein F38A6.3d protein.
          Length = 665

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 3/103 (2%)
 Frame = -2

Query: 494 IDQVQSDQGTEFVPCPGFGR---AALGCAYNDCNSPGEHAQPGHPEQHEQRPTQVHPEGI 324
           I+    D  TE +   G        L   YN+        + G  E+H +  T     G 
Sbjct: 436 IEDCDMDSDTESIEDSGLAPEFDVDLAPIYNEKMEVDGEDEDGGEEEHVRTATMTFCNGF 495

Query: 323 VSILQYLLSRHPSELPFISIEFNLRVTIPVVPDDIFRIGHVHP 195
            +  Q L  RH +     S + N R+++P+ P     I H+ P
Sbjct: 496 FATSQALRRRHATGQRTASGQPNRRISVPLWPRRTSWIRHLVP 538


>Z81568-15|CAB04595.2|  610|Caenorhabditis elegans Hypothetical
           protein K08E3.3b protein.
          Length = 610

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = -1

Query: 168 SSIVSLRRRRQISSPSICRGSFWTTGIQKSTS 73
           S+   LRRR +ISSP I R SF +  I+KS S
Sbjct: 509 STPTPLRRRAEISSPKILRSSF-SGAIRKSLS 539


>Z81568-14|CAB04591.2|  608|Caenorhabditis elegans Hypothetical
           protein K08E3.3a protein.
          Length = 608

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = -1

Query: 168 SSIVSLRRRRQISSPSICRGSFWTTGIQKSTS 73
           S+   LRRR +ISSP I R SF +  I+KS S
Sbjct: 509 STPTPLRRRAEISSPKILRSSF-SGAIRKSLS 539


>Z68760-13|CAD30434.1|  423|Caenorhabditis elegans Hypothetical
           protein F36H1.4c protein.
          Length = 423

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 346 VGRCSCCSGWPGCACSPGLLQSLYAHPSAARPNPGHGTNSVP 471
           V  C C  GW G  C    +Q+ YA P   R N    T+++P
Sbjct: 179 VPSCHCPQGWEGTRCDRHYVQAFYA-PINGRYNQS-STSAIP 218


>AL032641-7|CAD30455.1|  423|Caenorhabditis elegans Hypothetical
           protein F36H1.4c protein.
          Length = 423

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 346 VGRCSCCSGWPGCACSPGLLQSLYAHPSAARPNPGHGTNSVP 471
           V  C C  GW G  C    +Q+ YA P   R N    T+++P
Sbjct: 179 VPSCHCPQGWEGTRCDRHYVQAFYA-PINGRYNQS-STSAIP 218


>Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical protein
            R09A8.1 protein.
          Length = 1095

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = -3

Query: 418  RTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTSSLVIPVNCRLLASSSIFAS 245
            RT +A+  A   +  ++    SD+  F+Q+ +  +  T  + +P+   L +SSSI A+
Sbjct: 848  RTKSAVTTAC--TSTSKQAARSDEPFFSQRDTRQHSYTQRVQVPIGAALHSSSSIAAN 903


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,525,239
Number of Sequences: 27780
Number of extensions: 347067
Number of successful extensions: 1281
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1279
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)