Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_D06
(854 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 37 0.003
SPBC9B6.08 |clc1||clathrin light chain|Schizosaccharomyces pombe... 36 0.006
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 34 0.022
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 33 0.068
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 33 0.068
SPBC14C8.08c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 31 0.16
SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protei... 29 0.64
SPBC32F12.08c |duo1||DASH complex subunit Duo1 |Schizosaccharomy... 29 1.1
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 28 1.5
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.5
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 28 1.5
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 28 1.5
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 28 1.9
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 27 2.6
SPAC1687.18c |ssl3||cohesin loading factor Ssl3|Schizosaccharomy... 27 2.6
SPBC1604.20c |tea2|klp4|kinesin-like protein Tea2|Schizosaccharo... 27 2.6
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 27 3.4
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 27 3.4
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 4.5
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 27 4.5
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 26 5.9
SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 26 7.8
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 37.1 bits (82), Expect = 0.003
Identities = 44/219 (20%), Positives = 93/219 (42%), Gaps = 17/219 (7%)
Frame = +3
Query: 114 LQALEELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDL-----SAH 278
L LEE + +K ++VDS + L EDL+ + AL + E + LR++ H
Sbjct: 667 LLKLEESNKSLIKKQEDVDSLEKNIQTLKEDLRKSEEALRFSKLEAKNLREVIDNLKGKH 726
Query: 279 -----QRKRIAELLTNLLRDLAEIGAAVGGSELDFKLNVDTVGKLEEEFTVARLHISKMK 443
QR + L++ A + + + S D K V L ++ + + +
Sbjct: 727 ETLEAQRNDLHSSLSDAKNTNAILSSELTKSSEDVKRLTANVETLTQDSKAMKQSFTSLV 786
Query: 444 SEVKNIVQRCHSLESANIDA----NQKIEEYERTLGECRLLISQHEARCASLAESMRE-- 605
+ ++I H L +++ N +E + +C L Q+ ++ + M +
Sbjct: 787 NSYQSISNLYHELRDDHVNMQSQNNTLLESESKLKTDCENLTQQNMTLIDNVQKLMHKHV 846
Query: 606 -AENKKRQLEEAADALREECARLQAAERVQLAAAEDSQV 719
E+K +L+E L + L+++ + +A +++ Q+
Sbjct: 847 NQESKVSELKEVNGKLSLDLKNLRSS--LNVAISDNDQI 883
>SPBC9B6.08 |clc1||clathrin light chain|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 229
Score = 36.3 bits (80), Expect = 0.006
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 7/83 (8%)
Frame = +3
Query: 117 QALEELAVNYDQKSQEVDSKSR-ECDQLSEDLQSKQSALTSATAELQQLRDLS----AHQ 281
+A+++ N++ K +V +KSR E ++L E+ +SK + TS + +L DLS AH
Sbjct: 140 KAIDDFYENFNDKRDKVIAKSRKEQEKLLEENESKSTGTTS-WERILKLIDLSDKPEAHG 198
Query: 282 R--KRIAELLTNLLRDLAEIGAA 344
R +R ELL +L +D GAA
Sbjct: 199 RSTERFRELLISLAKDSNAPGAA 221
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 34.3 bits (75), Expect = 0.022
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 4/147 (2%)
Frame = +3
Query: 189 DQLSEDLQSKQSA-LTSATAELQQLRDLSAHQRKRIAEL--LTNLLRDLAEIGAAVGGSE 359
+QL+ +++++QS L E Q+L L + + E+ L L D E +
Sbjct: 435 NQLNTEIEARQSEKLNEVQEETQRLSQLLISSQPALTEVKHLKLCLSDSQEELLQLNAKL 494
Query: 360 LDFKLNVDTVGKLEEEFTVARLHISKMKSEVKNIVQRC-HSLESANIDANQKIEEYERTL 536
+ +D + + + + S MK ++ + QR +ES + N +I RTL
Sbjct: 495 EKANIVIDELNSAKLKLSKQVEEESSMKDDLTEMNQRLKEQIESYENEVNSEITS--RTL 552
Query: 537 GECRLLISQHEARCASLAESMREAENK 617
E L +Q+E +L E ++ A K
Sbjct: 553 KEFETLKTQYEKNLCNLREQLKTARMK 579
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 32.7 bits (71), Expect = 0.068
Identities = 29/132 (21%), Positives = 57/132 (43%)
Frame = +3
Query: 114 LQALEELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRI 293
L+ L+ +K E +S + + L+ ++ E QQL++ HQ +
Sbjct: 643 LENLQNEERKLQEKVNEHESLLSRTNDILSTLRKERDEKLIPIHEWQQLQERIEHQTLLL 702
Query: 294 AELLTNLLRDLAEIGAAVGGSELDFKLNVDTVGKLEEEFTVARLHISKMKSEVKNIVQRC 473
+ + AEI + +F+ +++V K++E A + KM N+++
Sbjct: 703 RQREKVPEQFAAEIEKNEDIRKENFEALMNSVLKVKENSIKATNNFEKMLGSRLNVIEAK 762
Query: 474 HSLESANIDANQ 509
+ LE +DANQ
Sbjct: 763 YKLEKHEMDANQ 774
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 32.7 bits (71), Expect = 0.068
Identities = 31/165 (18%), Positives = 66/165 (40%), Gaps = 4/165 (2%)
Frame = +3
Query: 150 QKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAH---QRKRIAELLTNLLR 320
Q E+DS QL +++ S + ++ + AE ++L + Q K LT+L
Sbjct: 436 QMQTELDSYITSNSQLKDEITSLKQTVSESEAERKRLFSSAQEKQLQMKETVNKLTSLQE 495
Query: 321 DLAEIGAAVGGSELDFKLNVDTVGKLEEEFTVARLHISKMKSEVKNIVQRCHSLESANID 500
E + E D + + + +L + K++ V+ + L+ A +
Sbjct: 496 QNNEFDRQLKEQEEDLQNKEEELTELRKLLREQTQDSQKLRLLVEQLELERQDLKQAGEN 555
Query: 501 ANQKIE-EYERTLGECRLLISQHEARCASLAESMREAENKKRQLE 632
+ +YE + ++ +A C S E + E ++ +L+
Sbjct: 556 HYSNLSSDYETQIKSLESSLTNSQAECVSFQEKINELNSQIDELK 600
Score = 28.7 bits (61), Expect = 1.1
Identities = 35/181 (19%), Positives = 79/181 (43%), Gaps = 3/181 (1%)
Frame = +3
Query: 126 EELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAE-- 299
E+ N + VD+ + +L ++ + L A + + +R+ + K++ +
Sbjct: 365 EKFKQNSESLKSRVDNLNDYITKLQNEIDECRRNLLWAESSCETIREENQKNIKKLNDAE 424
Query: 300 -LLTNLLRDLAEIGAAVGGSELDFKLNVDTVGKLEEEFTVARLHISKMKSEVKNIVQRCH 476
L + LL+ ++ +ELD + ++ +L++E T + +S+ ++E K +
Sbjct: 425 SLKSRLLQSRTQMQ-----TELDSYITSNS--QLKDEITSLKQTVSESEAERKRLFS--- 474
Query: 477 SLESANIDANQKIEEYERTLGECRLLISQHEARCASLAESMREAENKKRQLEEAADALRE 656
A +K + + T+ + L Q+ L E + +NK+ +L E LRE
Sbjct: 475 -------SAQEKQLQMKETVNKLTSLQEQNNEFDRQLKEQEEDLQNKEEELTELRKLLRE 527
Query: 657 E 659
+
Sbjct: 528 Q 528
>SPBC14C8.08c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
Length = 182
Score = 31.5 bits (68), Expect = 0.16
Identities = 24/98 (24%), Positives = 45/98 (45%)
Frame = +3
Query: 162 EVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLAEIGA 341
EVD + + L LQS+ S ++S +ELQ + + +K+ L + + E
Sbjct: 85 EVDYHGKSLEILDMLLQSRNSMISSLRSELQ---EKNQKDKKKEVNKLEEKMTNAKEPNV 141
Query: 342 AVGGSELDFKLNVDTVGKLEEEFTVARLHISKMKSEVK 455
V + ++V+T +E E +V SK+ +V+
Sbjct: 142 NVPSMKASSAISVETPETIESEASVDHKEASKIIKDVE 179
>SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protein
Mcp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 29.5 bits (63), Expect = 0.64
Identities = 28/138 (20%), Positives = 59/138 (42%), Gaps = 7/138 (5%)
Frame = +3
Query: 144 YDQKSQEVDSKSRECDQLS----EDLQSKQSALTSATAELQQLRDLSAHQRKRI--AELL 305
+D + V K+ + +L E + + + T T +++ L Q + + +L
Sbjct: 40 FDDYEKNVSDKTIQFQKLQMTAKEIIDAFERDSTQRTLQIESLESKIGEQERDLNNEKLA 99
Query: 306 TNLLRDLAEIGAAVGGS-ELDFKLNVDTVGKLEEEFTVARLHISKMKSEVKNIVQRCHSL 482
+ LR+ ++ G+ +++ + KLEEE + + KS+ + RC SL
Sbjct: 100 SETLREKTQLLEKENGALKVENGYLYEKSRKLEEEMAHLKKKCNVYKSKFEESSLRCKSL 159
Query: 483 ESANIDANQKIEEYERTL 536
S+N +E +R +
Sbjct: 160 YSSNTKLKDSMETMKRRM 177
>SPBC32F12.08c |duo1||DASH complex subunit Duo1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 166
Score = 28.7 bits (61), Expect = 1.1
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 516 EEYERTLGECRLLISQHEARCASLAESMREAENKKRQLEEAADALREECARL 671
EE ER + L I E R L + E ++RQ EEA +++ RL
Sbjct: 77 EELERLQHQKMLQIQAEEQRKIELQQEQERLEQERRQKEEAIALQKQQQQRL 128
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 28.3 bits (60), Expect = 1.5
Identities = 30/151 (19%), Positives = 55/151 (36%)
Frame = +3
Query: 159 QEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLAEIG 338
+EV+ + E QLSE K LQ L + + ++ +NLL L
Sbjct: 599 EEVEKLTDEITQLSERYNDKCHEFDELQKRLQTLEEENNKAKEDSTSKTSNLLEQLKMTE 658
Query: 339 AAVGGSELDFKLNVDTVGKLEEEFTVARLHISKMKSEVKNIVQRCHSLESANIDANQKIE 518
A V + + N + E E + + + +++++ + L++ E
Sbjct: 659 AEVDSLRKENEENKQVIALKESELVKSNDNKLLLNEQIESLNDQLSQLKTEMESVTTSKE 718
Query: 519 EYERTLGECRLLISQHEARCASLAESMREAE 611
L L +H SL + +RE E
Sbjct: 719 SLADYLSN---LKERHNDELDSLNKKLREFE 746
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 28.3 bits (60), Expect = 1.5
Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 4/163 (2%)
Frame = +3
Query: 162 EVDSKSRECDQLSEDL---QSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLAE 332
E+D +E D++S L + K+ L SA L + D Q+ ++ ++ R
Sbjct: 77 EIDRLKKEGDKVSILLMQERKKRKELESAKNNLLNVYDSLKMQKASVSSMVNRKQR---- 132
Query: 333 IGAAVGGSELDFKLNVDTVGKLEEEFTVARLHISKMKSEVKNIVQRCHSLESANIDANQK 512
AA ++ + LEE+ + +L I ++++E + E +A +
Sbjct: 133 --AAKEEQKIQEEFERQITDLLEEQQQL-KLEIERLEAETERANSETEQYEKQK-EALE- 187
Query: 513 IEEYERTLGECRLLISQHEARCASLAESMREAENK-KRQLEEA 638
EEYE EC Q +A +L ++ E E +Q+ +A
Sbjct: 188 -EEYEELRNECLKHDPQLDAEIRTLQDTFEEVERTLTKQVSDA 229
Score = 27.1 bits (57), Expect = 3.4
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Frame = +3
Query: 507 QKI-EEYERTLGEC-------RLLISQHEARCASLAESMREAENKKRQLEEAADALREEC 662
QKI EE+ER + + +L I + EA + E +K LEE + LR EC
Sbjct: 138 QKIQEEFERQITDLLEEQQQLKLEIERLEAETERANSETEQYEKQKEALEEEYEELRNEC 197
Query: 663 ARLQAAERVQLAAAEDS 713
+ ++ +D+
Sbjct: 198 LKHDPQLDAEIRTLQDT 214
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 28.3 bits (60), Expect = 1.5
Identities = 30/165 (18%), Positives = 66/165 (40%), Gaps = 4/165 (2%)
Frame = +3
Query: 192 QLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNL--LRDLAEIGAAVG-GSEL 362
Q + L+ + + + EL++ ++ + + + E +L + +L A+ E
Sbjct: 821 QNDKQLKKRDAEIIELKYELKKQQNSKSEVERDLVETNNSLTAVENLLTTERAIALDKEE 880
Query: 363 DFKLNVDTVGKLEEEFTVARLHISKMKSEVKNIVQRCHSLESANIDANQKIEEYERTLGE 542
+ + + +E+ F+ + ++ E ++ Q + LES ++ K+E E
Sbjct: 881 ILRRTQERLANIEDSFSETKQQNENLQRESASLKQINNELESELLEKTSKVETLLSEQNE 940
Query: 543 CRLLISQHEARCASLAESMRE-AENKKRQLEEAADALREECARLQ 674
+ +S E + EN L E A+ E+C LQ
Sbjct: 941 LKEKLSLEEKDLLDTKGELESLRENNATVLSEKAE-FNEQCKSLQ 984
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 28.3 bits (60), Expect = 1.5
Identities = 40/189 (21%), Positives = 74/189 (39%), Gaps = 7/189 (3%)
Frame = +3
Query: 114 LQALEELAVN--YDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLR-DLSAHQR 284
L+ L+E+A Y+ + E + E Q SE + + EL++ + DL+ + +
Sbjct: 156 LELLKEVAGTQIYENRRAESNKIMDETIQKSEKIDELLQYIEERLRELEEEKNDLAVYHK 215
Query: 285 K----RIAELLTNLLRDLAEIGAAVGGSELDFKLNVDTVGKLEEEFTVARLHISKMKSEV 452
K R E R+ EI + + E D ++ F I ++K+E+
Sbjct: 216 KDNERRCLEYAI-YSREHDEINSVLDALEQDRIAALERNDDDSGAFIQREERIERIKAEI 274
Query: 453 KNIVQRCHSLESANIDANQKIEEYERTLGECRLLISQHEARCASLAESMREAENKKRQLE 632
+ HSLE ++ Q E+Y + L Q + S ++ +K L
Sbjct: 275 TELN---HSLELLRVEKQQNDEDYTNIMKSKVALELQSSQLSRQIEFSKKDESSKLNILS 331
Query: 633 EAADALREE 659
E + E+
Sbjct: 332 ELESKISEK 340
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 27.9 bits (59), Expect = 1.9
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 17/113 (15%)
Frame = +3
Query: 123 LEELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALT---SAT-------AELQQLRDLS 272
L+E ++ + + EC+QL +LQ+ Q +L S T AEL+
Sbjct: 806 LDEFTPILEKSENDYNGVKLECEQLEGELQNHQQSLVQGESTTSLIKTEIAELELSLVNE 865
Query: 273 AHQRKRIAELL-------TNLLRDLAEIGAAVGGSELDFKLNVDTVGKLEEEF 410
H RK++ EL+ + L +++ + ++ E + T+ KL EF
Sbjct: 866 EHNRKKLTELIEIESAKFSGLNKEIDSLSTSMKTFESEINNGELTIQKLNHEF 918
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 952
Score = 27.5 bits (58), Expect = 2.6
Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 12/187 (6%)
Frame = +3
Query: 183 ECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLAEIGAAVGGSEL 362
E ++L +L+ + S + E++ L+D Q + L RD + L
Sbjct: 453 ELNELKNNLEVESSKVLRLDEEMKCLKDEQLSQFDTVFSLTDE--RDGLQKDLKNTKGNL 510
Query: 363 DFKLNVDTVGKLE---EEFTVARLHIS-KMKSEVKNIVQRCHSLESANIDA-NQKIEE-- 521
D ++ K + +E T+ +LH S + S+ N +Q S ++A +++ N K+ E
Sbjct: 511 DDEIGRSAFLKSQIRDQELTIEKLHDSLETLSQTNNSLQCEISEKNAELNSVNSKLSEGR 570
Query: 522 --YERTLGECRLLISQ---HEARCASLAESMREAENKKRQLEEAADALREECARLQAAER 686
E E +L Q E++ ASL S + NKK L + A+ ++
Sbjct: 571 AHLETANKENEILKQQLELSESKLASLLNSYQSFINKKEHLYSFLQLVEPSFAKSDSSNA 630
Query: 687 VQLAAAE 707
+ +E
Sbjct: 631 TESQISE 637
>SPAC1687.18c |ssl3||cohesin loading factor Ssl3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 27.5 bits (58), Expect = 2.6
Identities = 23/114 (20%), Positives = 47/114 (41%)
Frame = +3
Query: 132 LAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTN 311
LA Y + +++V CD L + L S + + + RKRI E+L +
Sbjct: 23 LAETYFKNAEKVLQDCGVCDSFGRLLSTGLQCLYSVLMDTKMEPRVELLTRKRICEVLLS 82
Query: 312 LLRDLAEIGAAVGGSELDFKLNVDTVGKLEEEFTVARLHISKMKSEVKNIVQRC 473
+ A++ A + + + + + T K + ++R+ K ++ RC
Sbjct: 83 HTVEYADVEAILNRALIIAEQHNLTEYKFSLQLLLSRVFCRTSPKAAKVLLTRC 136
>SPBC1604.20c |tea2|klp4|kinesin-like protein
Tea2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 27.5 bits (58), Expect = 2.6
Identities = 17/63 (26%), Positives = 35/63 (55%)
Frame = +3
Query: 147 DQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDL 326
++ +QEV+ + QL+ DL+ + + + AE Q +S R R+ ELL++ ++
Sbjct: 485 EKNAQEVEYYASLVKQLTSDLEERDTYIAMLEAERSQGTAIS-RARLRMEELLSDHNFEI 543
Query: 327 AEI 335
A++
Sbjct: 544 ADL 546
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 27.1 bits (57), Expect = 3.4
Identities = 30/151 (19%), Positives = 59/151 (39%)
Frame = +3
Query: 42 EALQGDMNRIXXXXXXXXXXXXXXLQALEELAVNYDQKSQEVDSKSRECDQLSEDLQSKQ 221
++LQG I L+ + +L E+D + + L D++S Q
Sbjct: 503 KSLQGKTEGISNAIEEKQKAMAPALEKINQLTSEKQILQVELDMLLNKENDLINDVESSQ 562
Query: 222 SALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLAEIGAAVGGSELDFKLNVDTVGKLE 401
S+L + ++ R++ + + K +++L I ++ + KLE
Sbjct: 563 SSLDKLRNDAEENRNILSSKLKVLSDLKGEKKDVSKNIERKKETVHNTYRNLMSNRTKLE 622
Query: 402 EEFTVARLHISKMKSEVKNIVQRCHSLESAN 494
E A L S+ + V +QR H ++ N
Sbjct: 623 E--MKASLSSSRSRGNVLESLQRLHESDNLN 651
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 27.1 bits (57), Expect = 3.4
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 10/170 (5%)
Frame = +3
Query: 195 LSEDLQSKQSALTSATAELQQLRDLSAHQRKRIA---ELLTNLLRD-LAEIGAAVGGSEL 362
L+ED ++S + +R+L + ++ EL + +D ++ A E
Sbjct: 542 LTEDETDTDQIISSRLVVFRNIRELQQQNQNLLSAVHELADRMEKDEKPDLDGAEIQEET 601
Query: 363 DFKLN--VDTVGKLEEEFTVARLHISKMKSEVKNIVQRCHSL-ESANIDANQKIEE--YE 527
K N +D + K+ EE + + K + +++VQ L + A N K+ E
Sbjct: 602 LIKANETIDQLTKMLEEVSDQLRYSLKERDFFRSLVQENEKLLDMAPATPNSKLNTNLIE 661
Query: 528 RTLGECRLLISQHEARCASLAESMRE-AENKKRQLEEAADALREECARLQ 674
+T + R LI + + ES++ + NK+++ EEA +L+ E + +Q
Sbjct: 662 QTSYQ-RSLIRLEQL--TNELESLKSISRNKEKKFEEAISSLQLEKSNIQ 708
Score = 25.8 bits (54), Expect = 7.8
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 14/136 (10%)
Frame = +3
Query: 162 EVDSKSRECDQLSEDLQSKQSALTSATAELQQLR----------DLSAHQRKRIAELLTN 311
E D+ R+ LS+ + AEL ++R + +K+I+EL
Sbjct: 244 EKDALQRKVSSLSQQFTESNLRYQNIVAELSEMRKQYEFSQVSFEKEISSQKQISELWME 303
Query: 312 LLRD----LAEIGAAVGGSELDFKLNVDTVGKLEEEFTVARLHISKMKSEVKNIVQRCHS 479
D L E+ + G EL+ KL EE+ + + +KS++ + + S
Sbjct: 304 KCEDCSLRLKELQNSNG--ELE-KLLEAAQSSFEEQLESHKEAEASLKSQINFLEKEVSS 360
Query: 480 LESANIDANQKIEEYE 527
LES AN+++ Y+
Sbjct: 361 LESQLKLANERLRHYD 376
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.6 bits (56), Expect = 4.5
Identities = 37/184 (20%), Positives = 79/184 (42%), Gaps = 3/184 (1%)
Frame = +3
Query: 117 QALEELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIA 296
++ EL NY+ E+ + + ++DL S+ A+ EL+ S +Q++
Sbjct: 643 ESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRK---ELEN----SKYQQQLST 695
Query: 297 ELLTNLLRDLAEIGAAVGGSELDFKLNVDTVGKLEE---EFTVARLHISKMKSEVKNIVQ 467
+ LTN D+ + D + + ++ +F LH++ + +K
Sbjct: 696 DRLTNANNDVEAFKKEAKELRSINQNLQDIISRQDQRASKFAEELLHVNSLAERLKG--- 752
Query: 468 RCHSLESANIDANQKIEEYERTLGECRLLISQHEARCASLAESMREAENKKRQLEEAADA 647
L ++ + + + ER + E L+++ E R SL ++ N ++QL +AA
Sbjct: 753 ---ELNASKGEKDLRKRTQERLISENDKLLAERE-RLMSLVSDLQTFLN-QQQLSDAARK 807
Query: 648 LREE 659
++ E
Sbjct: 808 VKFE 811
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3
Query: 324 LAEIGAAVGGSELDFKLNVDTV--GKLEEEFTVARLHISKMKSE 449
LA+ +A+ +D ++ + V G +E EF+V R H K K++
Sbjct: 165 LAQFTSALRKETIDTRIRIMEVDPGLVETEFSVVRFHGDKQKAD 208
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 26.2 bits (55), Expect = 5.9
Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +3
Query: 153 KSQEVDSKSRECD-QLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLA 329
+++ ++K +E + QLS Q +S + A QL +L + K++ N D+
Sbjct: 21 RAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELE-EETKQLRLKADN--EDIQ 77
Query: 330 EIGAAVGGSELDF-KLNVDTVGKLEEEFTVARLHISKMKSEVKNIVQRCHSLESANIDAN 506
+ A +++ + ++T KL E T ++ + +K+E + +R SLE D
Sbjct: 78 KTEAEQLSRKVELLEEELETNDKLLRE-TTEKMRQTDVKAE--HFERRVQSLERERDDME 134
Query: 507 QKIEE 521
QK+EE
Sbjct: 135 QKLEE 139
>SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 25.8 bits (54), Expect = 7.8
Identities = 16/68 (23%), Positives = 28/68 (41%)
Frame = +3
Query: 138 VNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLL 317
V+ D +Q + S E + L T+ELQ + L QRK + + L
Sbjct: 139 VDEDIDTQTMSSDMSEVQSMEISLNCDHEFFEKLTSELQSVEGLQREQRKILFNAIDILS 198
Query: 318 RDLAEIGA 341
+++ I +
Sbjct: 199 HEISLIAS 206
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,439,080
Number of Sequences: 5004
Number of extensions: 39558
Number of successful extensions: 164
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 424464280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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