SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_C22
         (844 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    89   4e-20
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    89   4e-20
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    83   2e-18
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   4.0  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   5.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   7.0  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   7.0  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.2  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 89.0 bits (211), Expect = 4e-20
 Identities = 42/47 (89%), Positives = 44/47 (93%)
 Frame = +1

Query: 607 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEV 747
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEV
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEGIFEV 47



 Score = 38.7 bits (86), Expect = 6e-05
 Identities = 16/28 (57%), Positives = 20/28 (71%)
 Frame = +2

Query: 755 AGDPTWGGEDFDNRMVNHFVQEFXRKXK 838
           AGD   GGEDFDNR+V +  Q+F +K K
Sbjct: 51  AGDTHLGGEDFDNRLVEYCTQDFKKKHK 78


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 89.0 bits (211), Expect = 4e-20
 Identities = 42/47 (89%), Positives = 44/47 (93%)
 Frame = +1

Query: 607 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEV 747
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEV
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEGIFEV 47



 Score = 38.7 bits (86), Expect = 6e-05
 Identities = 16/28 (57%), Positives = 20/28 (71%)
 Frame = +2

Query: 755 AGDPTWGGEDFDNRMVNHFVQEFXRKXK 838
           AGD   GGEDFDNR+V +  Q+F +K K
Sbjct: 51  AGDTHLGGEDFDNRLVEYCTQDFKKKHK 78


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 83.4 bits (197), Expect = 2e-18
 Identities = 38/47 (80%), Positives = 45/47 (95%)
 Frame = +1

Query: 607 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEV 747
           INEPTAAAIAYGLDKKG  E+N+L++DLGGGTFDVSILTI++G+FEV
Sbjct: 1   INEPTAAAIAYGLDKKGA-EQNILVYDLGGGTFDVSILTIDNGVFEV 46



 Score = 31.5 bits (68), Expect = 0.009
 Identities = 11/29 (37%), Positives = 21/29 (72%)
 Frame = +2

Query: 755 AGDPTWGGEDFDNRMVNHFVQEFXRKXKR 841
           +GD   GGEDFD +++++F++   +K K+
Sbjct: 50  SGDTHLGGEDFDQKVMDYFIKMVKQKHKK 78


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 562 TKDAGTISGLNVLRIINEPTAA 627
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
 Frame = +3

Query: 450 FH-GAYENEGNCQSL---SWQNCA---ECSYHGSRVLQ*LSKTSHKRCR 575
           FH GA+  EG C+S    ++ N +   EC  +G  V+   ++T+ K CR
Sbjct: 15  FHFGAFTCEG-CKSFFGRTYNNISSISECKNNGECVINKKNRTACKACR 62


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = +1

Query: 379 DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAKAYLGKT 504
           D  KPKI+   + ED+    E+       K K T    L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 135 LXVGVFQXREGGDHRQRPGQQDH 203
           + VG    R+  DHR RP +  H
Sbjct: 241 IPVGHIPIRQCDDHRDRPPRHFH 263


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = -3

Query: 524 VITAFCTVLPR*ALAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCF-M 348
           +ITAF +VLP+ A  +++ F     L    K   +   Y +  + +  ++   +  C+ +
Sbjct: 87  LITAFLSVLPQLAWDITYRFYGGFLLCKVVKYGQTLGPYLSSYVLMATAIDRHQAICYPL 146

Query: 347 SACTVASSNLRPMRRLA 297
           + C+  S   + M  LA
Sbjct: 147 TYCSWTSRRSKVMVYLA 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,846
Number of Sequences: 336
Number of extensions: 4205
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -