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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_C21
         (870 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_24730| Best HMM Match : Kinesin (HMM E-Value=2.3e-17)               32   0.53 
SB_39603| Best HMM Match : HATPase_c (HMM E-Value=0.0009)              31   1.2  
SB_33101| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_34673| Best HMM Match : UK (HMM E-Value=0.6)                        30   2.1  
SB_20630| Best HMM Match : rve (HMM E-Value=2.3e-19)                   30   2.8  
SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23)                   29   3.7  
SB_15183| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.7  
SB_43713| Best HMM Match : Na_Ca_ex (HMM E-Value=7.9e-32)              29   4.9  
SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   6.5  
SB_36678| Best HMM Match : Aa_trans (HMM E-Value=1.8e-07)              28   8.6  
SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0)                      28   8.6  
SB_36159| Best HMM Match : Peptidase_M28 (HMM E-Value=0)               28   8.6  
SB_34508| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.6  
SB_11829| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.6  

>SB_24730| Best HMM Match : Kinesin (HMM E-Value=2.3e-17)
          Length = 602

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 15/57 (26%), Positives = 32/57 (56%)
 Frame = +3

Query: 180 PXEQSSASLRIDTKVKFIDSRGDDVRSHRESKVQADEIPFREPEETEGFYNRPQGEG 350
           P ++S  S++   K+ F+D  G+ + +  + K +A  IP+R+ + T+   +   G+G
Sbjct: 80  PDDESGFSIQRHGKLSFVDLAGNCISALSDQKKRAGHIPYRDSKLTKLLADSLGGDG 136


>SB_39603| Best HMM Match : HATPase_c (HMM E-Value=0.0009)
          Length = 888

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +3

Query: 360 VRVEEHAQSP-YRV-QSQAVLTVDVPKNYDSDGTLDSLQYCKCV 485
           V+  +H Q P YR+ Q+QAV TV    + DS    DS Q+ +CV
Sbjct: 388 VQTTQHRQCPPYRLYQAQAVRTVQTLPSTDSAHRTDSTQHRQCV 431


>SB_33101| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 394

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 4/116 (3%)
 Frame = +3

Query: 216 TKVKFIDSRGDDVRSHRESKVQ-ADEIP--FREPEETEGFYNRPQGEGRYPVRVEEHAQS 386
           ++VK + S   +++  RE + +   +IP  F+E         +P+  GR  + + E    
Sbjct: 64  SRVKKLKSATQNIQEEREEEGRDIKKIPPCFKEQTHQPEVTTQPRRSGRKHISIFERRIR 123

Query: 387 PYRVQSQAVLTVDVPKNYDSDGTLDSLQYCKCVDTPDCNPRPGSARA-CGSGKYLC 551
            Y          D P+ +D+D   D      C  T D NP P       G+GK  C
Sbjct: 124 DYSHHLDRKTPRDYPRAHDTDQPSD-----PCQRTADQNPYPTQRDPHPGAGKRTC 174


>SB_34673| Best HMM Match : UK (HMM E-Value=0.6)
          Length = 641

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
 Frame = +3

Query: 171 SGSPXEQSSASLRIDTKVKFID--SRGDDVRSHRESKVQADEIPFREPEETEGFYNRPQG 344
           + +P      + R+D   +  D   R  + +   +   +A   P R PEET    +RPQ 
Sbjct: 69  TNTPDRPQEETNRLDRPQEITDVPERPQEAKDEPDRPQEATHEPDR-PEETTDVPDRPQE 127

Query: 345 EGRYPVRVEEHAQSPYRVQSQAVLTVDVP-KNYDSDGTLDSLQYCKCVDTPD 497
               P R +E   +P R Q     T D P ++++   T D  Q  +  D+PD
Sbjct: 128 VTTTPDRPQEANDAPDRPQE----TNDAPERSHEVTNTPDKPQ--EVTDSPD 173


>SB_20630| Best HMM Match : rve (HMM E-Value=2.3e-19)
          Length = 698

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = +2

Query: 602 LQRSGRRASH---AIAGTTELSPGPSPRPPASEINGVLGPGPA 721
           ++R+ R   H   AI+G +   P PS RPP  E  G   PGPA
Sbjct: 552 IRRNRRALVHEPVAISGESSSLPSPSNRPPVRE-GGEGSPGPA 593


>SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23)
          Length = 300

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 450 GTLDSLQYCKCVDTPDCNPRPGSARACGSGKY 545
           G +D  Q+C C +   CNP  G    C SG Y
Sbjct: 181 GGVDCRQHCNCTEWGTCNPFTGKC-LCQSGFY 211


>SB_15183| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1488

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
 Frame = -1

Query: 552 NTGTFQSHMLSHCQVLGCSQECQHICSTAENQEFHLNRSF*VHQQSKQLDSELCMETV-R 376
           +T TFQSH+++ C            C T   Q   + R+   H  S+ +   L   T+ R
Sbjct: 726 HTHTFQSHLVTPCDTHTFQSHLVTPCHTRTFQSHPVTRTLSSHTLSRPVTRTLSSHTLSR 785

Query: 375 ALPLLLDTFPL 343
            +   L  FP+
Sbjct: 786 PVTRTLSNFPV 796


>SB_43713| Best HMM Match : Na_Ca_ex (HMM E-Value=7.9e-32)
          Length = 228

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +1

Query: 13  QQRARGALAFNVHSSLIN*FTFANVCDSFFVNH*KYVC 126
           Q++ +G + F+V  ++      A VCD +FV+  + +C
Sbjct: 5   QRQKQGGIVFHVFVAIYTFAALATVCDEYFVSSLERIC 42


>SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1894

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = +3

Query: 276 VQADEIPFREPEETEGFYNRPQGEGRYPVRVEEHAQSPYRVQSQA 410
           VQ  + PFR  ++T+  +++P  + +   R  +  Q P+R + Q+
Sbjct: 613 VQPPQQPFRADQQTQQPFHQPGQQPQQSFRPGQQPQQPFRPEQQS 657


>SB_36678| Best HMM Match : Aa_trans (HMM E-Value=1.8e-07)
          Length = 956

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
 Frame = -1

Query: 465 ENQEF--HLNRSF*VHQQSKQLDSELCMETVRALPLLLDTFPLPGVCYRSLQFLLVHETG 292
           E+QE     +RSF   Q S +  S   +  +      +D FPL  +C    +   +H++ 
Sbjct: 633 ESQEITPQFHRSFQSFQDSSKKQSPRFLPPIFRCVAKVDFFPLTNIC----ELFHIHKSP 688

Query: 291 SRL-LAPWIHGGI*HRHR 241
           + L + P IH G+  +H+
Sbjct: 689 ACLKIDPMIHRGLRQKHQ 706


>SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0)
          Length = 587

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -1

Query: 531 HMLSHCQVLGCSQECQHICSTAENQEFHLNRSF*VHQQSKQLDSELCMETVRALP 367
           H+L H   L    +C+ ICS +  ++  LNR    H         +C+E V+ LP
Sbjct: 347 HLLVHS--LEKPYQCE-ICSKSFTRKDCLNRHLMTHVDPSMRKKHVCLECVKVLP 398


>SB_36159| Best HMM Match : Peptidase_M28 (HMM E-Value=0)
          Length = 771

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -2

Query: 797 TFPVGFXVRPGSLVVYQMVRVNRLDERVPGQELRLFRK-QEXGGKG 663
           +F  GF  R  SLV ++M  + R  E++   E+    K Q+ G KG
Sbjct: 90  SFETGFLCRTQSLVEFKMAELRRRTEKLVSDEVPFTGKSQDLGFKG 135


>SB_34508| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 225

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +3

Query: 264 RESKVQADEIPFREPEETEGFYNRPQGEGRYPVRVEEHAQSP 389
           R+ +V  + +PFR  E  E  + R + E   P++  E    P
Sbjct: 99  RDGQVARNSVPFRTREARESEFTRAKQEAPQPIKPAEKPPKP 140


>SB_11829| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 495

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
 Frame = -1

Query: 579 LCCSAYACNNTGTFQS--HMLSHCQVLGCSQECQHICSTAENQEFHLNRSF*VHQQSK 412
           +CCS   CN     Q   H L HC+   C+Q    I        +H++    VH  S+
Sbjct: 170 MCCSVVHCNQAIELQPTYHPLCHCE--QCAQRQNIITKETGAHVYHVHNRTHVHISSE 225


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,372,276
Number of Sequences: 59808
Number of extensions: 574927
Number of successful extensions: 1867
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1847
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2491217872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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