Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_C20
(864 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q16RI6 Cluster: Rnase h; n=2; Culicini|Rep: Rnase h - A... 67 5e-10
UniRef50_UPI00003C0619 Cluster: PREDICTED: similar to CG14801-PB... 67 6e-10
UniRef50_Q569U5 Cluster: LOC733188 protein; n=2; Xenopus|Rep: LO... 58 1e-08
UniRef50_A1L0Y1 Cluster: LOC100036702 protein; n=2; Xenopus trop... 59 2e-07
UniRef50_Q8IX06 Cluster: Exonuclease GOR; n=21; Homo/Pan/Gorilla... 57 5e-07
UniRef50_UPI0000F2CB48 Cluster: PREDICTED: similar to transcript... 56 6e-07
UniRef50_UPI00005A2516 Cluster: PREDICTED: similar to transcript... 57 7e-07
UniRef50_Q8N1G1 Cluster: RNA exonuclease 1 homolog; n=39; cellul... 55 3e-06
UniRef50_UPI00001E338C Cluster: PREDICTED: similar to REX1, RNA ... 54 6e-06
UniRef50_Q4SF45 Cluster: Chromosome 1 SCAF14609, whole genome sh... 37 2e-04
UniRef50_Q8T023 Cluster: LD38414p; n=7; Sophophora|Rep: LD38414p... 44 0.007
UniRef50_Q5BXI2 Cluster: SJCHGC01934 protein; n=1; Schistosoma j... 43 0.012
UniRef50_Q9X8R9 Cluster: Putative membrane protein; n=2; Strepto... 38 0.43
UniRef50_Q9U220 Cluster: Putative uncharacterized protein; n=3; ... 38 0.43
UniRef50_Q17F53 Cluster: Rnase h; n=1; Aedes aegypti|Rep: Rnase ... 37 0.57
UniRef50_Q2H6S6 Cluster: Putative uncharacterized protein; n=1; ... 36 1.7
UniRef50_Q5AL29 Cluster: RNA exonuclease 3; n=3; Saccharomycetal... 36 1.7
UniRef50_Q9VB01 Cluster: CG12877-PA, isoform A; n=8; Diptera|Rep... 35 2.3
UniRef50_Q0UC06 Cluster: Putative uncharacterized protein; n=1; ... 35 2.3
UniRef50_Q5KL74 Cluster: 3'-5' exonuclease, putative; n=1; Filob... 34 4.0
UniRef50_A5EM60 Cluster: Putative outer membrane autotransporter... 34 5.3
UniRef50_A4QY70 Cluster: Putative uncharacterized protein; n=1; ... 34 5.3
UniRef50_Q4SIY9 Cluster: Chromosome 21 SCAF14577, whole genome s... 33 7.1
UniRef50_A0TDJ8 Cluster: Sensor protein; n=3; Burkholderia cepac... 33 7.1
UniRef50_Q94AV6 Cluster: AT4g38500/F20M13_60; n=7; Magnoliophyta... 33 7.1
UniRef50_Q8I4C7 Cluster: Putative uncharacterized protein; n=3; ... 33 7.1
>UniRef50_Q16RI6 Cluster: Rnase h; n=2; Culicini|Rep: Rnase h -
Aedes aegypti (Yellowfever mosquito)
Length = 254
Score = 67.3 bits (157), Expect = 5e-10
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 7/70 (10%)
Frame = +3
Query: 516 EHLCVRCDKMFRMTRDGEYVKEETCLYHWGRVS-----SDSR--YACCKSMLGSRGCSVX 674
E C RC K F +T DGEY+ +E C+YHWGR++ S+ + Y+CC +GC++
Sbjct: 8 ERECCRCGKGFFITLDGEYLTQEHCIYHWGRMTRVYAGSEFKKVYSCCNGETDVKGCTIN 67
Query: 675 RSHVWSGTXS 704
+ HVW+G S
Sbjct: 68 KLHVWTGLLS 77
>UniRef50_UPI00003C0619 Cluster: PREDICTED: similar to CG14801-PB,
isoform B; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG14801-PB, isoform B - Apis mellifera
Length = 709
Score = 66.9 bits (156), Expect = 6e-10
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Frame = +3
Query: 501 EADAVEHLCVRCDKMFRMTR-DGEYVKEETCLYHWGRVSSD------SRYACCKSMLGSR 659
E A+E C RC K F + R DGEY+ EE C++HWG++ S + CC+S SR
Sbjct: 449 ELMAIERKCARCHKSFYVNREDGEYLYEEKCVHHWGKLRSGLGGAHCDLWECCRSRETSR 508
Query: 660 GCSVXRSHVWSG 695
GC+ HVW+G
Sbjct: 509 GCTTADFHVWTG 520
Score = 37.5 bits (83), Expect = 0.43
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Frame = +3
Query: 258 STEQLAQALRSHFLSPKRMWTLGYPLEIEPNSTKAVVYINPPPRPRPMTTW---DVNAPE 428
S L+ LR++ L+ + + LGYP+E V +P P + + D NA E
Sbjct: 312 SDATLSSILRNYTLTGEGLAHLGYPVECAYYPGYTVFINSPHPTGHRVPRYHRLDANAQE 371
Query: 429 FVPGS---------QGDSGRGSLGSTPRSDSDEE 503
FVP S +GDSG S S SD ++E
Sbjct: 372 FVPSSRQRWTAAESEGDSGNSSGSSVDNSDFEQE 405
>UniRef50_Q569U5 Cluster: LOC733188 protein; n=2; Xenopus|Rep:
LOC733188 protein - Xenopus laevis (African clawed frog)
Length = 1143
Score = 58.0 bits (134), Expect(2) = 1e-08
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Frame = +3
Query: 486 SDSDEEADAVEHLCVRCDKMFRMTRDGEYVKEETCLYHWGRVSS-------DSRYACCKS 644
++ +D+ +C RC + ++ G V+ E C+YHWGR+ ++ Y CC
Sbjct: 882 TEEKRSSDSSCRVCCRCGAEYLVSTSGNCVRREECIYHWGRLRRQRVHGGWETHYNCCSG 941
Query: 645 MLGSRGCSVXRSHVWSG 695
+GS GC + HV+ G
Sbjct: 942 AVGSTGCQTAKQHVYDG 958
Score = 24.2 bits (50), Expect(2) = 1e-08
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 255 LSTEQLAQALRSHFLSPKRMWTLGYPLEIEPNSTKAVVY 371
LS L L+ + LS ++M GYP + KAV++
Sbjct: 842 LSDAALYNKLKDYMLSEEQMQEHGYPRAHPDKAGKAVLF 880
>UniRef50_A1L0Y1 Cluster: LOC100036702 protein; n=2; Xenopus
tropicalis|Rep: LOC100036702 protein - Xenopus
tropicalis (Western clawed frog) (Silurana tropicalis)
Length = 1026
Score = 58.8 bits (136), Expect = 2e-07
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
Frame = +3
Query: 507 DAVEHLCVRCDKMFRMTRDGEYVKEETCLYHWGRV-------SSDSRYACCKSMLGSRGC 665
D + +C RC + + +T G++ ++E C YH G+V ++RY+CC++++GS GC
Sbjct: 772 DVLRRVCCRCGETYSITMQGKHTRKEECNYHSGKVLRHRVPGGIETRYSCCEAVVGSPGC 831
Query: 666 SVXRSHVWSG 695
+ + HV G
Sbjct: 832 QIAKLHVHDG 841
>UniRef50_Q8IX06 Cluster: Exonuclease GOR; n=21; Homo/Pan/Gorilla
group|Rep: Exonuclease GOR - Homo sapiens (Human)
Length = 318
Score = 57.2 bits (132), Expect = 5e-07
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Frame = +3
Query: 507 DAVEHLCVRCDKMFRMTRDGEYVKEETCLYHWGRVSSD-------SRYACCKSMLGSRGC 665
D+ +C RC + ++ G V+++ C YHWGRV S S+Y CC + GS GC
Sbjct: 51 DSSCRVCCRCGTEYLVSSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGC 110
Query: 666 SVXRSHVWSG 695
V + HV G
Sbjct: 111 QVAKQHVRDG 120
>UniRef50_UPI0000F2CB48 Cluster: PREDICTED: similar to transcription
elongation factor B polypeptide 3 binding protein 1; n=2;
Amniota|Rep: PREDICTED: similar to transcription
elongation factor B polypeptide 3 binding protein 1 -
Monodelphis domestica
Length = 1259
Score = 55.6 bits (128), Expect(2) = 6e-07
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Frame = +3
Query: 486 SDSDEEADAVEHLCVRCDKMFRMTRDGEYVKEETCLYHWGRVSS-------DSRYACCKS 644
++ + D+ +C RC + ++ G +++E C +HWGR+ +++Y+CC
Sbjct: 998 TEEKKTTDSSCRICCRCGTEYLVSPTGNCIRKEECCHHWGRLRRQRVAGGWETQYSCCSG 1057
Query: 645 MLGSRGCSVXRSHVWSG 695
+GS GC V + HV G
Sbjct: 1058 AVGSAGCQVAKQHVQDG 1074
Score = 21.0 bits (42), Expect(2) = 6e-07
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +3
Query: 255 LSTEQLAQALRSHFLSPKRMWTLGYPLEIEPNSTKAVVY 371
L+ L + L+ + L+ ++ GYPL +AVV+
Sbjct: 958 LTGAALYRRLKDYILTEDQLKENGYPLPHPEKPGRAVVF 996
>UniRef50_UPI00005A2516 Cluster: PREDICTED: similar to transcription
elongation factor B polypeptide 3 binding protein 1
isoform 1; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to transcription elongation factor B polypeptide
3 binding protein 1 isoform 1 - Canis familiaris
Length = 795
Score = 56.8 bits (131), Expect = 7e-07
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 7/62 (11%)
Frame = +3
Query: 522 LCVRCDKMFRMTRDGEYVKEETCLYHWGRVSS-------DSRYACCKSMLGSRGCSVXRS 680
+C RC K++ +T G++ + E C YH+G V S ++RY+CC +LGS GC V +
Sbjct: 554 ICCRCGKIYGVTSTGKHCRVEECNYHFGPVLSHKVLGGLETRYSCCGGVLGSAGCQVAKL 613
Query: 681 HV 686
HV
Sbjct: 614 HV 615
>UniRef50_Q8N1G1 Cluster: RNA exonuclease 1 homolog; n=39; cellular
organisms|Rep: RNA exonuclease 1 homolog - Homo sapiens
(Human)
Length = 1221
Score = 54.8 bits (126), Expect = 3e-06
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Frame = +3
Query: 525 CVRCDKMFRMTRDGEYVKEETCLYHWGRVSS-------DSRYACCKSMLGSRGCSVXRSH 683
C RC + ++ G +++E C YHWGR+ +++Y CC + GS GC V + H
Sbjct: 973 CCRCGTEYLVSSSGRCIRDEECYYHWGRLRRNRVAGGWETQYMCCSAAAGSVGCQVAKQH 1032
Query: 684 VWSG 695
V G
Sbjct: 1033 VQDG 1036
>UniRef50_UPI00001E338C Cluster: PREDICTED: similar to REX1, RNA
exonuclease 1 homolog (S. cerevisiae); n=4; Murinae|Rep:
PREDICTED: similar to REX1, RNA exonuclease 1 homolog
(S. cerevisiae) - Mus musculus
Length = 624
Score = 53.6 bits (123), Expect = 6e-06
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Frame = +3
Query: 462 GSLGSTPRSDSDEEADAVEHLCVRCDKMFRMTRDGEYVKEETCLYHWGRVSS-------D 620
G GS ++ C RC + ++ G + E C+YHWGRV S
Sbjct: 298 GRPGSAVLFSGEQLLSPTHRACCRCGTKYLVSFSGRCLCSEPCVYHWGRVVSIPVEEGWQ 357
Query: 621 SRYACCKSMLGSRGCSVXRSHVWSG 695
RY+CC + + + GC V + HV G
Sbjct: 358 VRYSCCSAPMEATGCKVAKQHVQDG 382
>UniRef50_Q4SF45 Cluster: Chromosome 1 SCAF14609, whole genome shotgun
sequence; n=2; Tetraodontidae|Rep: Chromosome 1
SCAF14609, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1342
Score = 36.7 bits (81), Expect(2) = 2e-04
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 510 AVEHLCVRCDKMFRMTRDGEYVKEETCLYHWGRVSSDSRYACC 638
A +C RC +++ +G V++E C +HWG++ + C
Sbjct: 1058 AFSKICCRCGAEYKVNANGNCVRKEECSFHWGQLRRHKGPSLC 1100
Score = 31.1 bits (67), Expect(2) = 2e-04
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 618 DSRYACCKSMLGSRGCSVXRSHVWSG 695
++ Y CC + +G+ GC V + HV G
Sbjct: 1132 ETSYRCCAAAVGAPGCQVSKQHVQDG 1157
>UniRef50_Q8T023 Cluster: LD38414p; n=7; Sophophora|Rep: LD38414p -
Drosophila melanogaster (Fruit fly)
Length = 787
Score = 43.6 bits (98), Expect = 0.007
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Frame = +3
Query: 525 CVRCDKMFRMTR-DGEYVKEETCLYHWGRVS------SDSRYACC-KSMLGSRGCSVXRS 680
C RC + F + G+Y+ E C YH G+ S R+ CC + S GC +
Sbjct: 529 CARCKRHFLVDELTGQYLTHEECQYHSGKYQRYYDGVSHGRWTCCNEGEESSPGCCLGDR 588
Query: 681 HVWSGT 698
HVWSG+
Sbjct: 589 HVWSGS 594
>UniRef50_Q5BXI2 Cluster: SJCHGC01934 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01934 protein - Schistosoma
japonicum (Blood fluke)
Length = 247
Score = 42.7 bits (96), Expect = 0.012
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 9/63 (14%)
Frame = +3
Query: 525 CVRCDKMFRMTRDGEYVKEETCLYHWGRV--------SSDSRYACCKSMLGSRGCSV-XR 677
C RC F + G + + C+YHWG+ D RY CC +G GC + +
Sbjct: 1 CCRCGTRFLVDEFGHSLTKGECIYHWGKAVKQRSFGRGFDLRYLCCDGEIGQLGCQICPK 60
Query: 678 SHV 686
HV
Sbjct: 61 GHV 63
>UniRef50_Q9X8R9 Cluster: Putative membrane protein; n=2;
Streptomyces|Rep: Putative membrane protein -
Streptomyces coelicolor
Length = 310
Score = 37.5 bits (83), Expect = 0.43
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +3
Query: 375 NPPPRPRPMTTWDVNAPEFVPGSQGDSGRGSLGSTPRSDSDEEADA 512
+P P PRP + +D P P S DSG GS S D+DE+ DA
Sbjct: 167 SPQPEPRPASVFDTEVP---PSSLADSGGGS-DSDSDGDADEDTDA 208
>UniRef50_Q9U220 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 365
Score = 37.5 bits (83), Expect = 0.43
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = +3
Query: 525 CVRCDKMFRMTRDGEYVKEETCLYH----WGRVSSDSRYACCKSMLG--SRGCSVXRSHV 686
C RC K F + DG + C+YH W ++ CC + G ++GC V HV
Sbjct: 94 CSRCSKGFYLNPDGT-ANAQKCVYHHRAKWDPLTGKKHLPCCSAKPGPSTKGCLVEDRHV 152
Query: 687 WS 692
+S
Sbjct: 153 FS 154
>UniRef50_Q17F53 Cluster: Rnase h; n=1; Aedes aegypti|Rep: Rnase h -
Aedes aegypti (Yellowfever mosquito)
Length = 979
Score = 37.1 bits (82), Expect = 0.57
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Frame = +3
Query: 435 PGSQGDSGRGSLGSTPRSDSDEEADAVEHLCVRCDKMFRMTRDGEYVKEETCLYH----- 599
P S G+ + TP+ + E C RC K+F + E ++C YH
Sbjct: 708 PRSTDTPGKAKI-HTPKPSRPPNEE--ERYCSRCSKVFNL-ETYEEPAVDSCNYHAKSTC 763
Query: 600 WGRVSSDSRYACCKSMLGSRGCSVXRSHVWS 692
+ R +D+ ++CC+ G+ GC HV S
Sbjct: 764 YRRGFADNLHSCCQQPAGTAGCMYANYHVSS 794
>UniRef50_Q2H6S6 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 500
Score = 35.5 bits (78), Expect = 1.7
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 297 LSPKRMW--TLGYPLEIEPNSTKAVVYINPPPRPRPMTTWDVNAPEFVPGSQGDS 455
L P R+W T P +EP +T+ PPP P P+ ++ E+ P + G S
Sbjct: 115 LHPARLWNPTNSTPRNLEPPTTRPRRLSTPPPPPVPLARPTLDVTEYAPEAPGTS 169
>UniRef50_Q5AL29 Cluster: RNA exonuclease 3; n=3;
Saccharomycetales|Rep: RNA exonuclease 3 - Candida
albicans (Yeast)
Length = 404
Score = 35.5 bits (78), Expect = 1.7
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 507 DAVEHLCVRCDKMFRMTRDGEYVKEETCLYHWGRVSSDSRYACCKSMLGSRGCSVXRSHV 686
+ + +C RC FR+ + + + C +H G+ +Y CC S + + CS ++HV
Sbjct: 153 EKITGICNRCGTEFRLDQQLQPI---VCEFHHGK-KQRGKYICCMSNVDGQPCSKAKNHV 208
Query: 687 W 689
+
Sbjct: 209 Y 209
>UniRef50_Q9VB01 Cluster: CG12877-PA, isoform A; n=8; Diptera|Rep:
CG12877-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 1010
Score = 35.1 bits (77), Expect = 2.3
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +3
Query: 516 EHLCVRCDKMFRMTRDGEYVKEETCLYH-----WGRVSSDSRYACCKSMLGSRGCSVXRS 680
E C RC K+F + E+ + C YH + R +D ++ CC+ G+ GC+
Sbjct: 744 ERYCSRCGKVFSLDIY-EHQSFDMCNYHPKSTGYRRGFTDHQHRCCQQPAGTPGCTYANY 802
Query: 681 HV 686
HV
Sbjct: 803 HV 804
>UniRef50_Q0UC06 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 663
Score = 35.1 bits (77), Expect = 2.3
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 15/70 (21%)
Frame = +3
Query: 525 CVRCDKMF-----RMTRDGEYVKEETCLYHWGR----------VSSDSRYACCKSMLGSR 659
C RC F R DG C +HWG+ V +R +CC +GS
Sbjct: 319 CDRCATRFQVFPERREEDGALTTGGQCRHHWGKRIFPKRTKNAVPEPTRLSCCNEAVGSP 378
Query: 660 GCSVXRSHVW 689
GC +HV+
Sbjct: 379 GCITHETHVF 388
>UniRef50_Q5KL74 Cluster: 3'-5' exonuclease, putative; n=1;
Filobasidiella neoformans|Rep: 3'-5' exonuclease,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 532
Score = 34.3 bits (75), Expect = 4.0
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Frame = +3
Query: 438 GSQGDSGRGSLGSTPRSDSDEEADAVEHLCVRCDKMFRMTRDGEYVKEETCLYHWGRVSS 617
G SG G G + D E + H C RC F ++ + C YH+GR +
Sbjct: 245 GYPDPSGEGLTGRGVETKPDGEGET--HDCDRCKVSFIVSSKNLERRFGECRYHYGRTAP 302
Query: 618 DS-------RYACCKSMLGSRGC 665
+ Y+CC G +GC
Sbjct: 303 ERVEGRRKWIYSCCGKERGEQGC 325
>UniRef50_A5EM60 Cluster: Putative outer membrane autotransporter
barrel; n=1; Bradyrhizobium sp. BTAi1|Rep: Putative
outer membrane autotransporter barrel - Bradyrhizobium
sp. (strain BTAi1 / ATCC BAA-1182)
Length = 1078
Score = 33.9 bits (74), Expect = 5.3
Identities = 19/52 (36%), Positives = 22/52 (42%)
Frame = +3
Query: 321 LGYPLEIEPNSTKAVVYINPPPRPRPMTTWDVNAPEFVPGSQGDSGRGSLGS 476
L Y + PN A +Y P P W V A F GSQ G +LGS
Sbjct: 771 LAYATKRNPNDALAAIYTKAPAAPVARPNWSVWAAGF-GGSQSTDGNTALGS 821
>UniRef50_A4QY70 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 538
Score = 33.9 bits (74), Expect = 5.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 384 PRPRPMTTWDVNAPEFVPGSQGDSG 458
PRP+P T W V++P+ + GSQ +G
Sbjct: 301 PRPQPATFWQVSSPQAMGGSQSSNG 325
>UniRef50_Q4SIY9 Cluster: Chromosome 21 SCAF14577, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 21 SCAF14577, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 613
Score = 33.5 bits (73), Expect = 7.1
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = +3
Query: 456 GRGSLGSTPRSDSDEEADAVEHLCVRCDKMFRMTRDGEYVKEETCLYHWGRVSSDSRYAC 635
GRG L T S+ D EA + C CD + M + L H+ + S + C
Sbjct: 400 GRGRLSGTDASNCDAEAVVTSYNCQLCDFRYSMAHSANVIVVAPLLLHYQH--NHSIHRC 457
Query: 636 C 638
C
Sbjct: 458 C 458
>UniRef50_A0TDJ8 Cluster: Sensor protein; n=3; Burkholderia cepacia
complex|Rep: Sensor protein - Burkholderia ambifaria
MC40-6
Length = 1032
Score = 33.5 bits (73), Expect = 7.1
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 306 KRMWTL-GYPLEIEPNSTKAVVYINPPPRPRPMTTWDVNAPEFVPGSQGDSGRGSLGSTP 482
+R+ TL G L ++ + +++ P P + W +APE P + D+ RG G+
Sbjct: 719 RRIVTLMGGALNVDSRLGEGTIFVAALPLPEAQSGWQDDAPE--PAALADAVRG-YGAEA 775
Query: 483 RSDSDEEADA 512
S++ EADA
Sbjct: 776 ESETGAEADA 785
>UniRef50_Q94AV6 Cluster: AT4g38500/F20M13_60; n=7;
Magnoliophyta|Rep: AT4g38500/F20M13_60 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 499
Score = 33.5 bits (73), Expect = 7.1
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 40 HVPLTQAPRSYFDSMCTQANQETCIFVFNSTIGFIKRPSRRWTLP 174
HV Q+ S+F ++C N+E ++V TIGF+ +P R +P
Sbjct: 75 HVWSCQSSLSFFSAIC---NKEGRLYVMLDTIGFVPKPQHRCPIP 116
>UniRef50_Q8I4C7 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 490
Score = 33.5 bits (73), Expect = 7.1
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 297 LSPKRMWTLGYPLEIEPNSTKAVVYINPPPRP--RPMTTWDVNA 422
L K + YPLE++ KA VYI P+ P TWD++A
Sbjct: 246 LKVKAAYNKEYPLEMQVQGAKAQVYIATSPKELNNPRRTWDLDA 289
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,898,188
Number of Sequences: 1657284
Number of extensions: 15555594
Number of successful extensions: 46645
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 44082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46566
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76652910257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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