Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_C19
         (863 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024264-1|ABC86326.1|  208|Drosophila melanogaster IP15818p pro...   269   4e-72
AY061217-1|AAL28765.2|  221|Drosophila melanogaster LD16326p pro...   269   4e-72
AE013599-4000|AAS64772.1|  203|Drosophila melanogaster CG2746-PB...   269   4e-72
AE013599-3999|AAF47305.1|  203|Drosophila melanogaster CG2746-PA...   269   4e-72
X74776-1|CAA52784.1|  203|Drosophila melanogaster ribosomal prot...   266   3e-71
AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-P...    32   1.2  
U95171-1|AAB51540.1| 1861|Drosophila melanogaster microtubule as...    30   4.7  
AY094825-1|AAM11178.1|  877|Drosophila melanogaster LD39479p pro...    30   4.7  
AE014297-3620|AAF56330.3| 1954|Drosophila melanogaster CG6875-PA...    30   4.7  

>BT024264-1|ABC86326.1|  208|Drosophila melanogaster IP15818p
           protein.
          Length = 208

 Score =  269 bits (659), Expect = 4e-72
 Identities = 127/158 (80%), Positives = 135/158 (85%)
 Frame = +1

Query: 46  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 225
           MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 6   MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 65

Query: 226 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 405
            RVRKNTEARRKGRHCGFGKR+GTANARMP K LW                +KKIDRHLY
Sbjct: 66  YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 125

Query: 406 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 519
           H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ
Sbjct: 126 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQ 163


>AY061217-1|AAL28765.2|  221|Drosophila melanogaster LD16326p
           protein.
          Length = 221

 Score =  269 bits (659), Expect = 4e-72
 Identities = 127/158 (80%), Positives = 135/158 (85%)
 Frame = +1

Query: 46  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 225
           MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 19  MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 78

Query: 226 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 405
            RVRKNTEARRKGRHCGFGKR+GTANARMP K LW                +KKIDRHLY
Sbjct: 79  YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 138

Query: 406 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 519
           H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ
Sbjct: 139 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQ 176


>AE013599-4000|AAS64772.1|  203|Drosophila melanogaster CG2746-PB,
           isoform B protein.
          Length = 203

 Score =  269 bits (659), Expect = 4e-72
 Identities = 127/158 (80%), Positives = 135/158 (85%)
 Frame = +1

Query: 46  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 225
           MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1   MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60

Query: 226 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 405
            RVRKNTEARRKGRHCGFGKR+GTANARMP K LW                +KKIDRHLY
Sbjct: 61  YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120

Query: 406 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 519
           H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQ 158


>AE013599-3999|AAF47305.1|  203|Drosophila melanogaster CG2746-PA,
           isoform A protein.
          Length = 203

 Score =  269 bits (659), Expect = 4e-72
 Identities = 127/158 (80%), Positives = 135/158 (85%)
 Frame = +1

Query: 46  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 225
           MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1   MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60

Query: 226 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 405
            RVRKNTEARRKGRHCGFGKR+GTANARMP K LW                +KKIDRHLY
Sbjct: 61  YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120

Query: 406 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 519
           H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQ 158


>X74776-1|CAA52784.1|  203|Drosophila melanogaster ribosomal protein
           L19 protein.
          Length = 203

 Score =  266 bits (652), Expect = 3e-71
 Identities = 126/158 (79%), Positives = 134/158 (84%)
 Frame = +1

Query: 46  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 225
           MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1   MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60

Query: 226 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 405
            RVRKNTEARRK RHCGFGKR+GTANARMP K LW                +KKIDRHLY
Sbjct: 61  YRVRKNTEARRKDRHCGFGKRKGTANARMPTKLLWMQRQPFCRRLLKKYRDSKKIDRHLY 120

Query: 406 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 519
           H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQ 158


>AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-PA
            protein.
          Length = 1718

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = -1

Query: 467  YSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLYFRSNFLRTLCLCTHSSFCGIRALAV 294
            YS++   +L  L        +YR    FL   +++ NF  TLC C +S FCG  A  V
Sbjct: 1321 YSIAQFRYLERLLLVHGRWSYYRMCK-FLRYFFYK-NFAFTLCHCWYSLFCGFSAQTV 1376


>U95171-1|AAB51540.1| 1861|Drosophila melanogaster microtubule
            associated protein protein.
          Length = 1861

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +1

Query: 16   LCCVGSHRVRMSSLKLQKRLAASVMRCGKKKVWL 117
            LC  G  R+R+SSL +Q++  A+V    +++++L
Sbjct: 1420 LCKAGYRRIRLSSLSIQRKWRATVQARRQREIFL 1453


>AY094825-1|AAM11178.1|  877|Drosophila melanogaster LD39479p
           protein.
          Length = 877

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +1

Query: 16  LCCVGSHRVRMSSLKLQKRLAASVMRCGKKKVWL 117
           LC  G  R+R+SSL +Q++  A+V    +++++L
Sbjct: 787 LCKAGYRRIRLSSLSIQRKWRATVQARRQREIFL 820


>AE014297-3620|AAF56330.3| 1954|Drosophila melanogaster CG6875-PA
            protein.
          Length = 1954

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +1

Query: 16   LCCVGSHRVRMSSLKLQKRLAASVMRCGKKKVWL 117
            LC  G  R+R+SSL +Q++  A+V    +++++L
Sbjct: 1513 LCKAGYRRIRLSSLSIQRKWRATVQARRQREIFL 1546


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,119,419
Number of Sequences: 53049
Number of extensions: 713456
Number of successful extensions: 1989
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1984
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)