Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_C18
(843 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023033-1|AAY55449.1| 186|Drosophila melanogaster IP04035p pro... 30 3.5
AE013599-2059|AAF58136.1| 165|Drosophila melanogaster CG12959-P... 30 3.5
BT025842-1|ABF85742.1| 818|Drosophila melanogaster IP12350p pro... 30 4.6
BT024328-1|ABC86390.1| 593|Drosophila melanogaster IP10742p pro... 30 4.6
BT022956-1|AAY55372.1| 148|Drosophila melanogaster IP04235p pro... 30 4.6
BT016048-1|AAV36933.1| 407|Drosophila melanogaster LP19671p pro... 29 6.0
AY061331-1|AAL28879.1| 403|Drosophila melanogaster LD25702p pro... 29 6.0
AE014297-3544|AAF56295.1| 479|Drosophila melanogaster CG17782-P... 29 6.0
AE014296-1025|AAF50735.1| 525|Drosophila melanogaster CG10489-P... 29 6.0
AB102715-1|BAD10843.1| 403|Drosophila melanogaster DNA polymera... 29 6.0
>BT023033-1|AAY55449.1| 186|Drosophila melanogaster IP04035p
protein.
Length = 186
Score = 30.3 bits (65), Expect = 3.5
Identities = 21/84 (25%), Positives = 35/84 (41%)
Frame = +2
Query: 86 VSNRLHTSVCLHAQYKNACQNGALTGQVSPSSQNTNITRHQSLWTFIRIRGTKSLQQ*VR 265
++ L ++ LH ++ +NGA + P N + + H +T+ +I Q +R
Sbjct: 41 LTGTLTNALRLHLPHR---RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILR 97
Query: 266 VRRSHGLRPSICSLTMSAVCCSKL 337
GLR IC L C L
Sbjct: 98 GHTRQGLRCRICKLNAHGDCAPNL 121
>AE013599-2059|AAF58136.1| 165|Drosophila melanogaster CG12959-PA
protein.
Length = 165
Score = 30.3 bits (65), Expect = 3.5
Identities = 21/84 (25%), Positives = 35/84 (41%)
Frame = +2
Query: 86 VSNRLHTSVCLHAQYKNACQNGALTGQVSPSSQNTNITRHQSLWTFIRIRGTKSLQQ*VR 265
++ L ++ LH ++ +NGA + P N + + H +T+ +I Q +R
Sbjct: 27 LTGTLTNALRLHLPHR---RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILR 83
Query: 266 VRRSHGLRPSICSLTMSAVCCSKL 337
GLR IC L C L
Sbjct: 84 GHTRQGLRCRICKLNAHGDCAPNL 107
>BT025842-1|ABF85742.1| 818|Drosophila melanogaster IP12350p
protein.
Length = 818
Score = 29.9 bits (64), Expect = 4.6
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = +2
Query: 143 QNGALTGQVSPSSQNTNITRHQSLWTFIRIRGTKSLQQ*VRVRRSHGLRPSICSLTMSAV 322
+NGA + P N + + H +T+ +I Q +R GLR IC L
Sbjct: 689 RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGD 748
Query: 323 CCSKL 337
C L
Sbjct: 749 CAPNL 753
>BT024328-1|ABC86390.1| 593|Drosophila melanogaster IP10742p
protein.
Length = 593
Score = 29.9 bits (64), Expect = 4.6
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = +2
Query: 143 QNGALTGQVSPSSQNTNITRHQSLWTFIRIRGTKSLQQ*VRVRRSHGLRPSICSLTMSAV 322
+NGA + P N + + H +T+ +I Q +R GLR IC L
Sbjct: 464 RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGD 523
Query: 323 CCSKL 337
C L
Sbjct: 524 CAPNL 528
>BT022956-1|AAY55372.1| 148|Drosophila melanogaster IP04235p
protein.
Length = 148
Score = 29.9 bits (64), Expect = 4.6
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = +2
Query: 143 QNGALTGQVSPSSQNTNITRHQSLWTFIRIRGTKSLQQ*VRVRRSHGLRPSICSLTMSAV 322
+NGA + P N + + H +T+ +I Q +R GLR IC L
Sbjct: 26 RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGD 85
Query: 323 CCSKL 337
C L
Sbjct: 86 CAPNL 90
>BT016048-1|AAV36933.1| 407|Drosophila melanogaster LP19671p
protein.
Length = 407
Score = 29.5 bits (63), Expect = 6.0
Identities = 26/87 (29%), Positives = 36/87 (41%)
Frame = +2
Query: 551 SLRSSKTFLKFLNAWTHNPRQRF*LQVLL*PRSPLKNCCGNSKRFMVLSSXALTPPQSRR 730
S SS F K+ ++H R+ L S LK+ R+ S PP ++R
Sbjct: 187 SSSSSNPFAKWTRPYSHAQNSRYPYWAL---NSRLKD------RYYGYKSQQAAPPAAQR 237
Query: 731 DRDSVASELRSTSTMHSTSTPAPWHRR 811
+DS + T T T PAP H R
Sbjct: 238 RQDSTTTTSAPT-TSRPTRRPAPRHHR 263
>AY061331-1|AAL28879.1| 403|Drosophila melanogaster LD25702p
protein.
Length = 403
Score = 29.5 bits (63), Expect = 6.0
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +1
Query: 541 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 696
++DLP + E + ++ D PP A++ PF S LR G +
Sbjct: 171 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 222
>AE014297-3544|AAF56295.1| 479|Drosophila melanogaster CG17782-PA
protein.
Length = 479
Score = 29.5 bits (63), Expect = 6.0
Identities = 26/87 (29%), Positives = 36/87 (41%)
Frame = +2
Query: 551 SLRSSKTFLKFLNAWTHNPRQRF*LQVLL*PRSPLKNCCGNSKRFMVLSSXALTPPQSRR 730
S SS F K+ ++H R+ L S LK+ R+ S PP ++R
Sbjct: 259 SSSSSNPFAKWTRPYSHAQNSRYPYWAL---NSRLKD------RYYGYKSQQAAPPAAQR 309
Query: 731 DRDSVASELRSTSTMHSTSTPAPWHRR 811
+DS + T T T PAP H R
Sbjct: 310 RQDSTTTTSAPT-TSRPTRRPAPRHHR 335
>AE014296-1025|AAF50735.1| 525|Drosophila melanogaster CG10489-PA
protein.
Length = 525
Score = 29.5 bits (63), Expect = 6.0
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +1
Query: 541 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 696
++DLP + E + ++ D PP A++ PF S LR G +
Sbjct: 293 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 344
>AB102715-1|BAD10843.1| 403|Drosophila melanogaster DNA polymerase
epsilon secondsubunit protein.
Length = 403
Score = 29.5 bits (63), Expect = 6.0
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +1
Query: 541 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 696
++DLP + E + ++ D PP A++ PF S LR G +
Sbjct: 171 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 222
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,829,490
Number of Sequences: 53049
Number of extensions: 763160
Number of successful extensions: 2427
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2427
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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