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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_C14
         (868 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55373-9|AAV58870.1|  648|Caenorhabditis elegans Hypothetical pr...    29   5.7  
U55373-8|AAD34666.1|  805|Caenorhabditis elegans Hypothetical pr...    29   5.7  
U55373-7|AAC25890.2|  890|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical pr...    28   9.9  

>U55373-9|AAV58870.1|  648|Caenorhabditis elegans Hypothetical
           protein F26F12.3c protein.
          Length = 648

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +3

Query: 3   LESYLVQTYNMFSKIVVLCALVAVSKAGLLAAPVHYSPAEAVSSQSIVRHD--QPQLHAA 176
           L   L    N+   + +L  LVA  K G +AAP       +  S+  ++ D  QP  +++
Sbjct: 182 LRGLLKHAANLQEVVAILSKLVAEWKEGGVAAPECIDVHRSQKSRFELKRDFFQPAFNSS 241

Query: 177 KLAVATPV 200
            LA + PV
Sbjct: 242 MLATSAPV 249


>U55373-8|AAD34666.1|  805|Caenorhabditis elegans Hypothetical
           protein F26F12.3b protein.
          Length = 805

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +3

Query: 3   LESYLVQTYNMFSKIVVLCALVAVSKAGLLAAPVHYSPAEAVSSQSIVRHD--QPQLHAA 176
           L   L    N+   + +L  LVA  K G +AAP       +  S+  ++ D  QP  +++
Sbjct: 339 LRGLLKHAANLQEVVAILSKLVAEWKEGGVAAPECIDVHRSQKSRFELKRDFFQPAFNSS 398

Query: 177 KLAVATPV 200
            LA + PV
Sbjct: 399 MLATSAPV 406


>U55373-7|AAC25890.2|  890|Caenorhabditis elegans Hypothetical
           protein F26F12.3a protein.
          Length = 890

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +3

Query: 3   LESYLVQTYNMFSKIVVLCALVAVSKAGLLAAPVHYSPAEAVSSQSIVRHD--QPQLHAA 176
           L   L    N+   + +L  LVA  K G +AAP       +  S+  ++ D  QP  +++
Sbjct: 424 LRGLLKHAANLQEVVAILSKLVAEWKEGGVAAPECIDVHRSQKSRFELKRDFFQPAFNSS 483

Query: 177 KLAVATPV 200
            LA + PV
Sbjct: 484 MLATSAPV 491


>Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical
           protein C08B11.3 protein.
          Length = 1244

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 129 KRLQRESSAREQPEVQLSTPRPKHT 55
           +++QRE+  REQ   Q S P P HT
Sbjct: 548 QQVQRENLNREQYSTQSSQPHPPHT 572


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,320,095
Number of Sequences: 27780
Number of extensions: 220354
Number of successful extensions: 695
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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