BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP02_FL5_C14 (868 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U55373-9|AAV58870.1| 648|Caenorhabditis elegans Hypothetical pr... 29 5.7 U55373-8|AAD34666.1| 805|Caenorhabditis elegans Hypothetical pr... 29 5.7 U55373-7|AAC25890.2| 890|Caenorhabditis elegans Hypothetical pr... 29 5.7 Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical pr... 28 9.9 >U55373-9|AAV58870.1| 648|Caenorhabditis elegans Hypothetical protein F26F12.3c protein. Length = 648 Score = 28.7 bits (61), Expect = 5.7 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%) Frame = +3 Query: 3 LESYLVQTYNMFSKIVVLCALVAVSKAGLLAAPVHYSPAEAVSSQSIVRHD--QPQLHAA 176 L L N+ + +L LVA K G +AAP + S+ ++ D QP +++ Sbjct: 182 LRGLLKHAANLQEVVAILSKLVAEWKEGGVAAPECIDVHRSQKSRFELKRDFFQPAFNSS 241 Query: 177 KLAVATPV 200 LA + PV Sbjct: 242 MLATSAPV 249 >U55373-8|AAD34666.1| 805|Caenorhabditis elegans Hypothetical protein F26F12.3b protein. Length = 805 Score = 28.7 bits (61), Expect = 5.7 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%) Frame = +3 Query: 3 LESYLVQTYNMFSKIVVLCALVAVSKAGLLAAPVHYSPAEAVSSQSIVRHD--QPQLHAA 176 L L N+ + +L LVA K G +AAP + S+ ++ D QP +++ Sbjct: 339 LRGLLKHAANLQEVVAILSKLVAEWKEGGVAAPECIDVHRSQKSRFELKRDFFQPAFNSS 398 Query: 177 KLAVATPV 200 LA + PV Sbjct: 399 MLATSAPV 406 >U55373-7|AAC25890.2| 890|Caenorhabditis elegans Hypothetical protein F26F12.3a protein. Length = 890 Score = 28.7 bits (61), Expect = 5.7 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%) Frame = +3 Query: 3 LESYLVQTYNMFSKIVVLCALVAVSKAGLLAAPVHYSPAEAVSSQSIVRHD--QPQLHAA 176 L L N+ + +L LVA K G +AAP + S+ ++ D QP +++ Sbjct: 424 LRGLLKHAANLQEVVAILSKLVAEWKEGGVAAPECIDVHRSQKSRFELKRDFFQPAFNSS 483 Query: 177 KLAVATPV 200 LA + PV Sbjct: 484 MLATSAPV 491 >Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical protein C08B11.3 protein. Length = 1244 Score = 27.9 bits (59), Expect = 9.9 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -2 Query: 129 KRLQRESSAREQPEVQLSTPRPKHT 55 +++QRE+ REQ Q S P P HT Sbjct: 548 QQVQRENLNREQYSTQSSQPHPPHT 572 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,320,095 Number of Sequences: 27780 Number of extensions: 220354 Number of successful extensions: 695 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 674 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 695 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2171433726 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -