Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_C10
         (833 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g35560.1 68417.m05053 expressed protein                             32   0.41 
At3g47570.1 68416.m05179 leucine-rich repeat transmembrane prote...    32   0.54 
At1g05880.1 68414.m00616 expressed protein                             30   1.6  
At4g12700.1 68417.m01994 expressed protein                             30   2.2  
At3g25960.1 68416.m03235 pyruvate kinase, putative similar to py...    28   6.6  
At4g21640.1 68417.m03136 subtilase family protein similar to sub...    28   8.8  
At2g23520.1 68415.m02807 expressed protein ; expression supporte...    28   8.8  

>At4g35560.1 68417.m05053 expressed protein 
          Length = 917

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = -1

Query: 290 YKLSSGTRVSVPLVD-DEGVSSSKEESNKAPASLAMN*CNFNLLLRSWKVRCLCLDWYTA 114
           Y  S+G+RVSV   + D  + S   +   +P S AM  C  NL  +S K+    L W  A
Sbjct: 88  YLASNGSRVSVGYSNGDILIWSIPSKGECSPESSAMI-CKLNLGYKSEKIPIASLKWVYA 146

Query: 113 KSKAPTPILAKSSS 72
           + KA    +  SSS
Sbjct: 147 EGKASRVYVIGSSS 160


>At3g47570.1 68416.m05179 leucine-rich repeat transmembrane protein
           kinase, putative protein kinase Xa21 - Oryza sativa,
           PIR:A57676
          Length = 1010

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -1

Query: 404 LLITAPMISSPVFTLSKKCLNLAVLSTFRNVSNGGINAY 288
           L++   M+S P+ T   K LNL  LS F N  +GGI A+
Sbjct: 390 LILDQNMLSGPLPTSLGKLLNLRYLSLFSNRLSGGIPAF 428


>At1g05880.1 68414.m00616 expressed protein
          Length = 426

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = -1

Query: 152 WKVRCLCLDWYT-AKSKAPTPILAKSSSPLSDSHVFCNCC 36
           W V C+C  W   A+S   +  L +   P  D+  FC  C
Sbjct: 58  WNVDCICKQWSAGAQSVRDSVGLLELDPPSDDNEYFCGAC 97


>At4g12700.1 68417.m01994 expressed protein
          Length = 561

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 20/56 (35%), Positives = 27/56 (48%)
 Frame = +1

Query: 265 TLVPEDNLYALMPPFETFLNVDKTARLRHFFDNVKTGELIIGAVINRTASGMMLKV 432
           T  PED L+       TFL  +  A L+     VKTGE  + A  N+TA G  + +
Sbjct: 47  TYEPEDPLFHPSDKITTFLTSNSNATLKSDDSIVKTGEDFMAA--NQTAFGGFINI 100


>At3g25960.1 68416.m03235 pyruvate kinase, putative similar to
           pyruvate kinase, cytosolic isozyme [Nicotiana tabacum]
           SWISS-PROT:Q42954
          Length = 497

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 21/90 (23%), Positives = 41/90 (45%)
 Frame = +1

Query: 376 ELIIGAVINRTASGMMLKVLCTAGPTSRYVADINVKAFLPVGNIIQAVDKKNVSRNYLMN 555
           E+++G      A     K++CT GP SR V    ++  L  G  +   +  + S +Y   
Sbjct: 2   EMLLGGQATNGALRSKTKIVCTLGPASRSVE--MIEKLLKAGMNVARFNFSHGSHSY-HQ 58

Query: 556 DTVCCEVIEVIPDTDKMVCGMKGVTRGPMI 645
           +T+  + +    D   ++C +   T+ P+I
Sbjct: 59  ETL--DNLRTAMDNTGILCAVMLDTKSPVI 86


>At4g21640.1 68417.m03136 subtilase family protein similar to
           subtilase SP1 [Oryza sativa] GI:9957714
          Length = 733

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -1

Query: 341 LAVLSTFRNVSNGGINAYKLSSGTRVSVPLV 249
           +++L+    +  G  N +KL SGT +S P+V
Sbjct: 492 VSILAAVSPLDPGAFNGFKLHSGTSMSTPVV 522


>At2g23520.1 68415.m02807 expressed protein ; expression supported
           by MPSS
          Length = 862

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 125 WYTAKSKAPTPILAKSSSPLSD 60
           W+T+K ++P P+    SSP+ D
Sbjct: 521 WFTSKRQSPKPVAKSYSSPMYD 542


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,324,256
Number of Sequences: 28952
Number of extensions: 319917
Number of successful extensions: 867
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1921616800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)