Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_C07
         (864 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z34802-4|CAA84335.4|  365|Caenorhabditis elegans Hypothetical pr...    59   3e-09
Z81135-4|CAB03457.1|  500|Caenorhabditis elegans Hypothetical pr...    28   9.9  
AL032634-4|CAA21599.1|  500|Caenorhabditis elegans Hypothetical ...    28   9.9  

>Z34802-4|CAA84335.4|  365|Caenorhabditis elegans Hypothetical
           protein M88.4 protein.
          Length = 365

 Score = 59.3 bits (137), Expect = 3e-09
 Identities = 27/72 (37%), Positives = 45/72 (62%)
 Frame = +3

Query: 387 MALRLKKDIKKASYYVWFLGAQESRGLRGEEFALPAITLLEERARELEPFXVTLQVSHKG 566
           M+   +  I K+ +YVW+LG++E+ G+RG    LP +  L + + +  P   T+Q+S KG
Sbjct: 1   MSWFFQSKIAKSHFYVWYLGSKEADGVRGSAVVLPVMRQLLKESFKKTPSKATVQISSKG 60

Query: 567 LKIIQNVTAKGK 602
           LK+IQ+V A  +
Sbjct: 61  LKLIQSVPAMSR 72


>Z81135-4|CAB03457.1|  500|Caenorhabditis elegans Hypothetical
           protein W01G7.5 protein.
          Length = 500

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = -1

Query: 576 LFSGLYVKPAT*P*RVPTPLLSPRVT*SPVAQTPRPADREIPEPRGTKRNTTLS 415
           L SG    PA      P P  +P+   +P +    PA R IP    T  N+T++
Sbjct: 41  LLSGGAKTPARPTVAKPAPKPTPKSAPAPKSPKSPPARRSIPRAAATAANSTIN 94


>AL032634-4|CAA21599.1|  500|Caenorhabditis elegans Hypothetical
           protein W01G7.5 protein.
          Length = 500

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = -1

Query: 576 LFSGLYVKPAT*P*RVPTPLLSPRVT*SPVAQTPRPADREIPEPRGTKRNTTLS 415
           L SG    PA      P P  +P+   +P +    PA R IP    T  N+T++
Sbjct: 41  LLSGGAKTPARPTVAKPAPKPTPKSAPAPKSPKSPPARRSIPRAAATAANSTIN 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,365,401
Number of Sequences: 27780
Number of extensions: 261326
Number of successful extensions: 608
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)