Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_C06
         (853 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical pr...    76   3e-14
Z93375-4|CAB07562.2|  647|Caenorhabditis elegans Hypothetical pr...    51   9e-07
AF068718-4|AAC17765.1|   98|Caenorhabditis elegans Hypothetical ...    35   0.064
AF068709-8|AAO26015.1|  315|Caenorhabditis elegans Serpentine re...    32   0.45 
AL117195-10|CAB60771.1| 1072|Caenorhabditis elegans Hypothetical...    31   1.0  
AF068709-7|AAO26014.1|  317|Caenorhabditis elegans Serpentine re...    31   1.0  
Z79603-2|CAB01893.4|  500|Caenorhabditis elegans Hypothetical pr...    31   1.4  
U41022-1|AAA82338.3|  303|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z92833-9|CAD54141.2|  665|Caenorhabditis elegans Hypothetical pr...    30   2.4  
AL023842-11|CAD54168.2|  665|Caenorhabditis elegans Hypothetical...    30   2.4  
Z68760-13|CAD30434.1|  423|Caenorhabditis elegans Hypothetical p...    29   4.2  
AL032641-7|CAD30455.1|  423|Caenorhabditis elegans Hypothetical ...    29   4.2  
Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical pr...    28   7.3  
AF036704-3|AAB88559.2|  503|Caenorhabditis elegans Hypothetical ...    28   7.3  
Z81581-4|CAB04663.2|  568|Caenorhabditis elegans Hypothetical pr...    28   9.7  
U41015-4|AAA82313.1|  317|Caenorhabditis elegans Hypothetical pr...    28   9.7  
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a...    28   9.7  

>Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical
           protein F26D10.9a protein.
          Length = 613

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 29/58 (50%), Positives = 43/58 (74%)
 Frame = +3

Query: 426 GMTREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVIVRAPKCGPPEPRTWYE 599
           G+T+E++ KY +DPFW  +R  LFVLFW+AW+ M AGAIA++V +PKC   +   W++
Sbjct: 43  GLTKEQLEKYRNDPFWKPVRTILFVLFWLAWVLMFAGAIAIVVLSPKCAEKQKPDWWQ 100


>Z93375-4|CAB07562.2|  647|Caenorhabditis elegans Hypothetical
           protein C38C6.2 protein.
          Length = 647

 Score = 51.2 bits (117), Expect = 9e-07
 Identities = 20/58 (34%), Positives = 35/58 (60%)
 Frame = +3

Query: 426 GMTREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVIVRAPKCGPPEPRTWYE 599
           G++ +E+ ++ +DP W  +R  LFVLFW+ WL + A AI ++  +P C       W++
Sbjct: 78  GLSEQELEQFRNDPCWKFIRTVLFVLFWLIWLALFAVAILLVCFSPTCVLRAKPNWWQ 135


>AF068718-4|AAC17765.1|   98|Caenorhabditis elegans Hypothetical
           protein R01B10.3 protein.
          Length = 98

 Score = 35.1 bits (77), Expect = 0.064
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +3

Query: 426 GMTREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVIV 554
           G + +E+    ++P W   R++   +FW  W  +LAG+I +IV
Sbjct: 35  GYSLDELNAKREEPKWRVARYTAIAMFWGIWGALLAGSILIIV 77


>AF068709-8|AAO26015.1|  315|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 59 protein.
          Length = 315

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 25/76 (32%), Positives = 39/76 (51%)
 Frame = -3

Query: 284 AVGRYLLLRFAEVRFGRPEFCIRFWYSLVGCNVFILFHLPSIXSRDGFSVAPTSLIVYYT 105
           +V R L + FA  +F R  FC R WY  +G ++F+  HLP +    GF+     ++    
Sbjct: 120 SVHRILTVMFAG-KFER--FCYR-WYPAIGISMFVYSHLPKLL-WPGFTF-EVHIVNGTL 173

Query: 104 LKTSFSLRESSPFTIN 57
           +KT F+L   +   IN
Sbjct: 174 MKTRFNLVYVNAININ 189


>AL117195-10|CAB60771.1| 1072|Caenorhabditis elegans Hypothetical
           protein Y57A10A.15 protein.
          Length = 1072

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -3

Query: 230 EFCIRFWYSLVGCNVFILFHLPSIXSRDGFSVAPTSLIVYYTL 102
           +F +R +Y  V  NV++L  LP    R GF +    L+ +Y L
Sbjct: 516 KFPLRSFYETVQNNVYMLGELPISPDRKGFELDEAGLVRFYQL 558


>AF068709-7|AAO26014.1|  317|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 60 protein.
          Length = 317

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = -3

Query: 227 FCIRFWYSLVGCNVFILFHLPSIXSRDGFSVAPTSLIVYYTLKTSFSLRESSPFTIN 57
           FC R WY  +G ++F+  HLP +    GF++    ++    +KT F+L   +   IN
Sbjct: 136 FCYR-WYPAIGISMFVYSHLPKLL-WPGFTL-EVHIVNGTLMKTRFNLVYVNAININ 189


>Z79603-2|CAB01893.4|  500|Caenorhabditis elegans Hypothetical
           protein M163.2 protein.
          Length = 500

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -3

Query: 590 CPGFGRAALGCAYNDCNSPGEHAQPGHPEQHEQR 489
           C  FG  A  CAY D +S  +H +  HPE H  +
Sbjct: 351 CCDFGSCA--CAYTDPSSLRKHVKSKHPEHHAMK 382


>U41022-1|AAA82338.3|  303|Caenorhabditis elegans Hypothetical
           protein K08B5.2 protein.
          Length = 303

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -3

Query: 470 EGIVSILQYLLSRHPSELPFISIEFNLRVTIPVVPDDIFRIGHVHP 333
           E +  +LQYLL         +  +FN+R++ P +P  I +    HP
Sbjct: 184 ETVSKVLQYLLENEIYLTKCVKAKFNVRLSSPDIPHLIMKFIECHP 229


>Z92833-9|CAD54141.2|  665|Caenorhabditis elegans Hypothetical
           protein F38A6.3d protein.
          Length = 665

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 3/103 (2%)
 Frame = -3

Query: 632 IDQVQSDQGTEFVPCPGFGR---AALGCAYNDCNSPGEHAQPGHPEQHEQRPTQVHPEGI 462
           I+    D  TE +   G        L   YN+        + G  E+H +  T     G 
Sbjct: 436 IEDCDMDSDTESIEDSGLAPEFDVDLAPIYNEKMEVDGEDEDGGEEEHVRTATMTFCNGF 495

Query: 461 VSILQYLLSRHPSELPFISIEFNLRVTIPVVPDDIFRIGHVHP 333
            +  Q L  RH +     S + N R+++P+ P     I H+ P
Sbjct: 496 FATSQALRRRHATGQRTASGQPNRRISVPLWPRRTSWIRHLVP 538


>AL023842-11|CAD54168.2|  665|Caenorhabditis elegans Hypothetical
           protein F38A6.3d protein.
          Length = 665

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 3/103 (2%)
 Frame = -3

Query: 632 IDQVQSDQGTEFVPCPGFGR---AALGCAYNDCNSPGEHAQPGHPEQHEQRPTQVHPEGI 462
           I+    D  TE +   G        L   YN+        + G  E+H +  T     G 
Sbjct: 436 IEDCDMDSDTESIEDSGLAPEFDVDLAPIYNEKMEVDGEDEDGGEEEHVRTATMTFCNGF 495

Query: 461 VSILQYLLSRHPSELPFISIEFNLRVTIPVVPDDIFRIGHVHP 333
            +  Q L  RH +     S + N R+++P+ P     I H+ P
Sbjct: 496 FATSQALRRRHATGQRTASGQPNRRISVPLWPRRTSWIRHLVP 538


>Z68760-13|CAD30434.1|  423|Caenorhabditis elegans Hypothetical
           protein F36H1.4c protein.
          Length = 423

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 484 VGRCSCCSGWPGCACSPGLLQSLYAHPSAARPNPGHGTNSVP 609
           V  C C  GW G  C    +Q+ YA P   R N    T+++P
Sbjct: 179 VPSCHCPQGWEGTRCDRHYVQAFYA-PINGRYNQS-STSAIP 218


>AL032641-7|CAD30455.1|  423|Caenorhabditis elegans Hypothetical
           protein F36H1.4c protein.
          Length = 423

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 484 VGRCSCCSGWPGCACSPGLLQSLYAHPSAARPNPGHGTNSVP 609
           V  C C  GW G  C    +Q+ YA P   R N    T+++P
Sbjct: 179 VPSCHCPQGWEGTRCDRHYVQAFYA-PINGRYNQS-STSAIP 218


>Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical protein
            R09A8.1 protein.
          Length = 1095

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = -1

Query: 556  RTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTSSLVIPVNCRLLASSSIFAS 383
            RT +A+  A   +  ++    SD+  F+Q+ +  +  T  + +P+   L +SSSI A+
Sbjct: 848  RTKSAVTTAC--TSTSKQAARSDEPFFSQRDTRQHSYTQRVQVPIGAALHSSSSIAAN 903


>AF036704-3|AAB88559.2|  503|Caenorhabditis elegans Hypothetical
           protein ZK185.2 protein.
          Length = 503

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -3

Query: 146 GFSVAPTSLIVYYTLKTSFSLRESSPFTINHDLQIAVQGTNVLGLC 9
           G SV    + ++           ++PFTI+  L  A+Q T +L +C
Sbjct: 397 GISVPSNIIFIFIIFLFGVGFHNTTPFTISFVLVCAIQVTTLLYIC 442


>Z81581-4|CAB04663.2|  568|Caenorhabditis elegans Hypothetical
           protein T02E1.2 protein.
          Length = 568

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 147 VSRXDGGQVKEDEHVATYKAIPESDTE 227
           V   DG  V+EDE +  ++ +P  DTE
Sbjct: 119 VEGEDGNPVEEDEEMPAHEDLPSEDTE 145


>U41015-4|AAA82313.1|  317|Caenorhabditis elegans Hypothetical
           protein F20B6.5 protein.
          Length = 317

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +1

Query: 229 SGRPKRTSANRRRRYLPTAPKRNY*RRKT 315
           +GR KR+S +R+R+  P  P+R+  + KT
Sbjct: 195 TGREKRSSEDRKRQVPPEEPRRSSHQSKT 223


>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 192 protein.
          Length = 2957

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = -3

Query: 536 PGEHAQPGHPEQHEQR---PTQVHPE 468
           P +  QP HP QH+Q    P Q HP+
Sbjct: 520 PQQQQQPQHPHQHQQPASVPMQHHPQ 545


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,468,668
Number of Sequences: 27780
Number of extensions: 402067
Number of successful extensions: 1492
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1490
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)