Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_C05
         (894 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309...    31   0.94 
02_05_0856 - 32272757-32273494,32273578-32273866,32273961-322743...    31   0.94 
08_02_1493 + 27512473-27512557,27512670-27513351,27513459-275135...    28   8.7  
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    28   8.7  

>03_04_0090 +
           17228253-17228403,17229062-17229129,17229238-17230902,
           17231002-17231143,17231648-17232399
          Length = 925

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
 Frame = -1

Query: 237 TNIDQTRH------RPHPLPVQTRHAPVLRANPYSEVTGSNLP 127
           T IDQ  H      + H +PVQ  H+PVL+ NP   +     P
Sbjct: 324 TQIDQPSHCQRIKNQDHSVPVQKNHSPVLKTNPSPRIIPEAAP 366


>02_05_0856 -
           32272757-32273494,32273578-32273866,32273961-32274312,
           32275232-32275850
          Length = 665

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
 Frame = -2

Query: 248 EHNARTSTRPGTGR-IRFPSKPDTPRSSEPILIPKLXDPICRLPLPTLFYRTRGSSPWRP 72
           +HN   STR  TG  + FP      RS  P  + K      R P      +     PW P
Sbjct: 13  QHNQTNSTRRATGMFVNFPPVAAISRSICPFELAKSQQQRPRAPSLLCNKQPHAPHPWPP 72

Query: 71  AADMGTNRRDISTY 30
           ++   T    +S++
Sbjct: 73  SSQQRTTTTTVSSH 86


>08_02_1493 +
           27512473-27512557,27512670-27513351,27513459-27513522,
           27513734-27513961
          Length = 352

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = +1

Query: 415 RSARFCTTAVQRSAQNWHGQGESDCLIKXKHXDGPPGCLTXCDSRPSAP 561
           R+AR C  A +   Q W G G  +C I       P  CL  C   P+ P
Sbjct: 290 RAARRCGVAGELEGQQWRGDG-CNCGIMAGILSFPI-CLGNCSGDPACP 336


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 21/78 (26%), Positives = 23/78 (29%)
 Frame = +1

Query: 661  PXXYXTPPXXXLXPXXPPLRAPSVLXRNXLATGHPXXGEPPRGTXXXFXXXXPXPVPXRX 840
            P     PP   L    PPL + S   +  L    P    PP           P P P   
Sbjct: 1131 PLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPP--PPPLSPSLPPPPPPPPL 1188

Query: 841  PHXPXPXXAXXXXXXXPP 894
            P  P P  A       PP
Sbjct: 1189 PSGPPPQPAPPPLPIQPP 1206


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,853,303
Number of Sequences: 37544
Number of extensions: 441209
Number of successful extensions: 1261
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)