Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_C03
(865 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 268 3e-72
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 268 3e-72
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 268 5e-72
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 268 5e-72
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 268 5e-72
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 268 5e-72
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 268 5e-72
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 268 5e-72
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 268 5e-72
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 265 3e-71
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 260 7e-70
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 177 8e-45
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 144 9e-35
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 128 5e-30
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 97 2e-20
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 97 2e-20
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 97 2e-20
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 95 8e-20
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 92 5e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.007
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.007
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 34 0.11
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.46
U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protei... 31 0.80
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 29 4.3
Z81122-5|CAB03357.1| 579|Caenorhabditis elegans Hypothetical pr... 29 5.7
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 29 5.7
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 29 5.7
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 29 5.7
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 29 5.7
U25032-1|AAB18670.1| 1379|Caenorhabditis elegans par-3 protein. 28 9.9
U00067-5|ABD63219.1| 1340|Caenorhabditis elegans Abnormal embryo... 28 9.9
U00067-4|AAK73874.1| 1376|Caenorhabditis elegans Abnormal embryo... 28 9.9
U00067-3|AAK73875.1| 1379|Caenorhabditis elegans Abnormal embryo... 28 9.9
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 28 9.9
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 268 bits (657), Expect = 3e-72
Identities = 127/143 (88%), Positives = 129/143 (90%)
Frame = +3
Query: 237 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 416
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 417 PEEHPVLLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 596
PEEHPVLLTEAPLNPKANREKMT IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 158
Query: 597 GVSHTXPIYXGXXXXXXXLRLGL 665
GV+HT PIY G LRL L
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDL 181
Score = 91.9 bits (218), Expect = 5e-19
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVLPSIVGRPRHQG 250
MCD++VAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 268 bits (657), Expect = 3e-72
Identities = 127/143 (88%), Positives = 129/143 (90%)
Frame = +3
Query: 237 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 416
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 417 PEEHPVLLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 596
PEEHPVLLTEAPLNPKANREKMT IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 158
Query: 597 GVSHTXPIYXGXXXXXXXLRLGL 665
GV+HT PIY G LRL L
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDL 181
Score = 90.2 bits (214), Expect = 2e-18
Identities = 38/43 (88%), Positives = 42/43 (97%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVLPSIVGRPRHQG 250
MCD++VAAL++DNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 268 bits (656), Expect = 5e-72
Identities = 126/143 (88%), Positives = 129/143 (90%)
Frame = +3
Query: 237 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 416
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 417 PEEHPVLLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 596
PEEHPVLLTEAPLNPKANREKMT IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 597 GVSHTXPIYXGXXXXXXXLRLGL 665
GV+HT PIY G LRL L
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDL 181
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVLPSIVGRPRHQG 250
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 268 bits (656), Expect = 5e-72
Identities = 126/143 (88%), Positives = 129/143 (90%)
Frame = +3
Query: 237 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 416
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 417 PEEHPVLLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 596
PEEHPVLLTEAPLNPKANREKMT IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 597 GVSHTXPIYXGXXXXXXXLRLGL 665
GV+HT PIY G LRL L
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDL 181
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVLPSIVGRPRHQG 250
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 268 bits (656), Expect = 5e-72
Identities = 126/143 (88%), Positives = 129/143 (90%)
Frame = +3
Query: 237 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 416
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 417 PEEHPVLLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 596
PEEHPVLLTEAPLNPKANREKMT IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 597 GVSHTXPIYXGXXXXXXXLRLGL 665
GV+HT PIY G LRL L
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDL 181
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVLPSIVGRPRHQG 250
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 268 bits (656), Expect = 5e-72
Identities = 126/143 (88%), Positives = 129/143 (90%)
Frame = +3
Query: 237 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 416
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 417 PEEHPVLLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 596
PEEHPVLLTEAPLNPKANREKMT IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 597 GVSHTXPIYXGXXXXXXXLRLGL 665
GV+HT PIY G LRL L
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDL 181
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVLPSIVGRPRHQG 250
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 268 bits (656), Expect = 5e-72
Identities = 126/143 (88%), Positives = 129/143 (90%)
Frame = +3
Query: 237 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 416
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 417 PEEHPVLLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 596
PEEHPVLLTEAPLNPKANREKMT IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 597 GVSHTXPIYXGXXXXXXXLRLGL 665
GV+HT PIY G LRL L
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDL 181
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVLPSIVGRPRHQG 250
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 268 bits (656), Expect = 5e-72
Identities = 126/143 (88%), Positives = 129/143 (90%)
Frame = +3
Query: 237 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 416
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 25 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 84
Query: 417 PEEHPVLLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 596
PEEHPVLLTEAPLNPKANREKMT IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGD
Sbjct: 85 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 144
Query: 597 GVSHTXPIYXGXXXXXXXLRLGL 665
GV+HT PIY G LRL L
Sbjct: 145 GVTHTVPIYEGYALPHAILRLDL 167
Score = 54.4 bits (125), Expect = 1e-07
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +2
Query: 176 KAGFAGDDAPRAVLPSIVGRPRHQG 250
+AGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQG 29
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 268 bits (656), Expect = 5e-72
Identities = 126/143 (88%), Positives = 129/143 (90%)
Frame = +3
Query: 237 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 416
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 417 PEEHPVLLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 596
PEEHPVLLTEAPLNPKANREKMT IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 597 GVSHTXPIYXGXXXXXXXLRLGL 665
GV+HT PIY G LRL L
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDL 181
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVLPSIVGRPRHQG 250
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 265 bits (649), Expect = 3e-71
Identities = 124/137 (90%), Positives = 126/137 (91%)
Frame = +3
Query: 255 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 434
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 435 LLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTX 614
LLTEAPLNPKANREKMT IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 615 PIYXGXXXXXXXLRLGL 665
PIY G LRL L
Sbjct: 121 PIYEGYALPHAILRLDL 137
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 260 bits (638), Expect = 7e-70
Identities = 122/143 (85%), Positives = 127/143 (88%)
Frame = +3
Query: 237 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 416
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+A
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIA 97
Query: 417 PEEHPVLLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 596
PEEHPVLLTEAPLNPK+NREKMT IMFETFNTPAMYV IQAVLSLYASGRTTGIVLD+GD
Sbjct: 98 PEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGD 157
Query: 597 GVSHTXPIYXGXXXXXXXLRLGL 665
GV+HT PIY G RL L
Sbjct: 158 GVTHTVPIYEGYALPHAIQRLDL 180
Score = 86.6 bits (205), Expect = 2e-17
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +2
Query: 128 DEEVAALVVDNGSGMCKAGFAGDDAPRAVLPSIVGRPRHQG 250
+EE+AALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 177 bits (431), Expect = 8e-45
Identities = 80/144 (55%), Positives = 103/144 (71%), Gaps = 1/144 (0%)
Frame = +3
Query: 237 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRV 413
P VM G D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++
Sbjct: 41 PKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKI 100
Query: 414 APEEHPVLLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 593
PEEHPVLLT+APLNP NRE+ I FETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSG
Sbjct: 101 FPEEHPVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSG 160
Query: 594 DGVSHTXPIYXGXXXXXXXLRLGL 665
DGV+H PI G R+ L
Sbjct: 161 DGVTHAVPIVKGFAMKHAIQRMDL 184
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = +2
Query: 146 LVVDNGSGMCKAGFAGDDAPRAVLPSIVGRPRH 244
+V+DNGSG+ KAGFAG+ P+ + VGRP++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKY 43
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 144 bits (348), Expect = 9e-35
Identities = 67/132 (50%), Positives = 89/132 (67%), Gaps = 1/132 (0%)
Frame = +3
Query: 273 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEA 449
KD VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE
Sbjct: 53 KDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEP 112
Query: 450 PLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTXPIYXG 629
PLNP +NREKM +MFE + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+Y G
Sbjct: 113 PLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEG 172
Query: 630 XXXXXXXLRLGL 665
RL +
Sbjct: 173 FALHHLTRRLDI 184
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +2
Query: 146 LVVDNGSGMCKAGFAGDDAPRAVLPSIVGRP 238
+VVDNG+G K G+AG + P + PS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 128 bits (309), Expect = 5e-30
Identities = 65/135 (48%), Positives = 83/135 (61%), Gaps = 9/135 (6%)
Frame = +3
Query: 252 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 428
V G+ D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 429 PVLLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVL 584
LLTE PLN NRE IMFE+FN P +Y+A+QAVL+L AS + TG+V+
Sbjct: 116 FFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVI 175
Query: 585 DSGDGVSHTXPIYXG 629
DSGDGV+H P+ G
Sbjct: 176 DSGDGVTHCIPVADG 190
Score = 37.5 bits (83), Expect = 0.012
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVLPSIV 229
M ++ A V+DNG+G K G+AG+ P+ ++PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 96.7 bits (230), Expect = 2e-20
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +3
Query: 237 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 380
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 91.9 bits (218), Expect = 5e-19
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVLPSIVGRPRHQG 250
MCD++VAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 96.7 bits (230), Expect = 2e-20
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +3
Query: 237 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 380
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVLPSIVGRPRHQG 250
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 96.7 bits (230), Expect = 2e-20
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +3
Query: 237 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 380
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVLPSIVGRPRHQG 250
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 94.7 bits (225), Expect = 8e-20
Identities = 42/98 (42%), Positives = 63/98 (64%)
Frame = +3
Query: 336 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFETFNTP 515
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 516 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTXPIYXG 629
A Y++ VLS +A GRT G+++DSG + P++ G
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDG 191
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 131 EEVAALVVDNGSGMCKAGFAGDDAPRAVLPSIV 229
+EV+ LV D GS + GFAG++ P+ +PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 91.9 bits (218), Expect = 5e-19
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = +2
Query: 122 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVLPSIVGRPRHQG 250
MCD++VAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 91.1 bits (216), Expect = 9e-19
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = +3
Query: 237 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 371
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 38.3 bits (85), Expect = 0.007
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Frame = +3
Query: 270 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 443
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 444 EAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTT----GIVLDSG 593
+ A + + I+F+ F ++ + L S + +V+DSG
Sbjct: 98 DNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSG 151
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 38.3 bits (85), Expect = 0.007
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Frame = +3
Query: 270 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 443
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 444 EAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTT----GIVLDSG 593
+ A + + I+F+ F ++ + L S + +V+DSG
Sbjct: 98 DNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSG 151
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 34.3 bits (75), Expect = 0.11
Identities = 24/76 (31%), Positives = 37/76 (48%)
Frame = +3
Query: 402 ELRVAPEEHPVLLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 581
EL+V P ++ VLL+ P ++ I E + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 582 LDSGDGVSHTXPIYXG 629
+D G+ V + P+ G
Sbjct: 326 VDIGERV-NIVPVIDG 340
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 32.3 bits (70), Expect = 0.46
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 601 TPSPESSTIPVVRPDAYSESTAWMATYMAGVL 506
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protein
58 protein.
Length = 305
Score = 31.5 bits (68), Expect = 0.80
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 131 EEVAALVVDNGS-GMCKAGFAGDDAPRAV--LPSIVGRPRHQGRDGRYGTEG 277
++++ L D G C AG G PR +P I G P G GR+GT G
Sbjct: 146 DDISVLRHDPGRCAQCPAGPMGPPGPRGPPGVPGITGAPGLDGIPGRHGTPG 197
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +2
Query: 188 AGDDAPRAVLPSIVGRPRHQGRDGRYGTEGLLCR 289
AG PR P VG P QGRDG G G + R
Sbjct: 147 AGPPGPRGA-PGSVGEPGPQGRDGMGGRPGNMGR 179
>Z81122-5|CAB03357.1| 579|Caenorhabditis elegans Hypothetical
protein T13F2.6 protein.
Length = 579
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 10 IPRSELGSLRCTAITKLCNSKLIYLFIIE 96
+P+ E+G L CT I C ++ I+ F IE
Sbjct: 156 LPKREIGRLLCTVIAVQCPTEKIWKFRIE 184
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 407 ACRPRGTPSPAH*GSPQPQGQQREDDPXHVRNIQ---HARHVRRH 532
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 407 ACRPRGTPSPAH*GSPQPQGQQREDDPXHVRNIQ---HARHVRRH 532
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 407 ACRPRGTPSPAH*GSPQPQGQQREDDPXHVRNIQ---HARHVRRH 532
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 407 ACRPRGTPSPAH*GSPQPQGQQREDDPXHVRNIQ---HARHVRRH 532
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
>U25032-1|AAB18670.1| 1379|Caenorhabditis elegans par-3 protein.
Length = 1379
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = +2
Query: 455 QPQGQQREDDPXHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLXGIA 634
+ +G DP H++ Q +H R++ + + + RS + R+ +R +R+ + +
Sbjct: 866 EKRGMGAAADPQHIKLFQDIKHQRQNSAPTSSTQKRSKSQPRSSSQRN---YRSPMKLVD 922
Query: 635 LPXAIPASGTXPGRXXPD 688
LP AS + + D
Sbjct: 923 LPTTAAASASTNSQNLDD 940
>U00067-5|ABD63219.1| 1340|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform c protein.
Length = 1340
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = +2
Query: 455 QPQGQQREDDPXHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLXGIA 634
+ +G DP H++ Q +H R++ + + + RS + R+ +R +R+ + +
Sbjct: 830 EKRGMGAAADPQHIKLFQDIKHQRQNSAPTSSTQKRSKSQPRSSSQRN---YRSPMKLVD 886
Query: 635 LPXAIPASGTXPGRXXPD 688
LP AS + + D
Sbjct: 887 LPTTAAASASTNSQNLDD 904
>U00067-4|AAK73874.1| 1376|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform a protein.
Length = 1376
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = +2
Query: 455 QPQGQQREDDPXHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLXGIA 634
+ +G DP H++ Q +H R++ + + + RS + R+ +R +R+ + +
Sbjct: 866 EKRGMGAAADPQHIKLFQDIKHQRQNSAPTSSTQKRSKSQPRSSSQRN---YRSPMKLVD 922
Query: 635 LPXAIPASGTXPGRXXPD 688
LP AS + + D
Sbjct: 923 LPTTAAASASTNSQNLDD 940
>U00067-3|AAK73875.1| 1379|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform b protein.
Length = 1379
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = +2
Query: 455 QPQGQQREDDPXHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLXGIA 634
+ +G DP H++ Q +H R++ + + + RS + R+ +R +R+ + +
Sbjct: 866 EKRGMGAAADPQHIKLFQDIKHQRQNSAPTSSTQKRSKSQPRSSSQRN---YRSPMKLVD 922
Query: 635 LPXAIPASGTXPGRXXPD 688
LP AS + + D
Sbjct: 923 LPTTAAASASTNSQNLDD 940
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 176 KAGFAGDDAPRAVLPSIVGRPRHQGRDGRYGTEG 277
++G AG P+ P G+P H G DG GT G
Sbjct: 224 RSGGAGTPGPQGP-PGPSGQPGHSGNDGVPGTPG 256
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,601,171
Number of Sequences: 27780
Number of extensions: 360338
Number of successful extensions: 1380
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1373
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -