Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_B24
         (871 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0393 + 17517511-17517777,17518913-17518987,17519080-175191...    31   0.91 
10_05_0019 - 8049145-8049334,8059808-8060618,8060708-8060783,806...    31   1.6  
06_01_1036 + 8134132-8134539,8134885-8134956,8134969-8135088,813...    29   3.7  
04_04_0766 - 27923120-27923554,27923843-27924580,27924815-279248...    29   3.7  
06_03_1321 + 29308538-29308588,29308728-29308827,29308939-293091...    29   4.8  

>10_08_0393 +
           17517511-17517777,17518913-17518987,17519080-17519133,
           17519235-17519300,17519383-17519441,17520143-17520177,
           17520527-17520616,17520684-17520730,17520817-17520917,
           17521259-17521323,17521819-17522135,17522418-17522481,
           17522565-17522740,17523386-17523487,17523704-17523847,
           17523937-17524032,17524357-17524458,17524740-17524835
          Length = 651

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 17/31 (54%), Positives = 21/31 (67%)
 Frame = +3

Query: 375 KLIVYLGTGEWIVEVVRQGGGRRAACLVGQA 467
           KLI Y+  G WI   V+Q  G++ ACLVGQA
Sbjct: 547 KLIPYISKGSWI---VKQSVGKK-ACLVGQA 573


>10_05_0019 -
           8049145-8049334,8059808-8060618,8060708-8060783,
           8060856-8061008
          Length = 409

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
 Frame = +3

Query: 507 VKICSLXVRVPKLGASSKDDLDEIE----TDESASGVKLETDFEQSIDEIANKKVQANGV 674
           VK+     RVP    S  DD D+++     +E     K E   E++ DE+    V   G 
Sbjct: 143 VKLAPRKRRVPATSDSDADDEDDVKERDGNEEGEEEEKAEAVVEKAADEVVENCVDTPGY 202

Query: 675 QPPP 686
            P P
Sbjct: 203 TPTP 206


>06_01_1036 + 8134132-8134539,8134885-8134956,8134969-8135088,
            8135179-8135256,8135442-8135697,8136427-8136515,
            8137229-8137376,8137460-8137899,8138048-8138562,
            8138791-8139061,8139231-8139492,8139583-8139938
          Length = 1004

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
 Frame = +3

Query: 423  RQGGGRRAACLVGQAP*MAATSPQGSPSVK-ICSLXVRVPKLGASSKDDLDEIETDESAS 599
            RQ   +   C+ G    +AA++      +K +  +  R+  L    +++L + E +E   
Sbjct: 828  RQSEQKAIKCMRGLINALAASASSDKDLMKELSQMASRLRSLDEHPEEELPQDEAEEIFK 887

Query: 600  GVKLETDFEQSIDEIANKKVQANGVQPPP--RTAIRNTSS 713
             + L+  F    + +         V+PPP  R A R+ SS
Sbjct: 888  KLGLDAGFRLETNSVVPPTPAPRSVRPPPSRRRARRSPSS 927


>04_04_0766 -
           27923120-27923554,27923843-27924580,27924815-27924874,
           27925281-27925328
          Length = 426

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = +3

Query: 567 LDEIETDESASGVKLETDFEQSIDEIANKKVQANGVQPPPRTAIRNTSSVPGE 725
           ++E+E+    S   LET   +   EI  KKV A   +  P   + +     GE
Sbjct: 303 VEELESSSQPSPCPLETRSRRKCREITGKKVSAGAKRKAPAPEVASDDDTDGE 355


>06_03_1321 +
           29308538-29308588,29308728-29308827,29308939-29309156,
           29309251-29310591
          Length = 569

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = +3

Query: 447 ACLVGQAP*MAATSPQGSPSVKICSLXV-RVPKLGASSKDDLDEI-ETDESASGVKLETD 620
           +CLV  +      + +GSP  ++C + V  V K   +  DD+  + E  + AS +K+   
Sbjct: 234 SCLVAASRAYRFQTTRGSPLTRVCQVVVAAVCKFNVAPPDDMSLLYELPDDASSMKVVER 293

Query: 621 FEQSID 638
            E + D
Sbjct: 294 IEHTTD 299


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,205,741
Number of Sequences: 37544
Number of extensions: 484412
Number of successful extensions: 1315
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1315
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)