Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_B24
         (871 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   3.0  
AY330180-1|AAQ16286.1|  176|Anopheles gambiae odorant-binding pr...    24   5.2  
AJ618924-1|CAF02003.1|  144|Anopheles gambiae odorant-binding pr...    24   5.2  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = -3

Query: 536  NPHXQGTDLYGR*ALRTRSRHSRGLTDQTCRPPPAAL 426
            N H Q  D     + R  S   RG    T  PPP A+
Sbjct: 1099 NQHNQDNDRTSLYSARNTSEEQRGRRHPTPSPPPRAV 1135


>AY330180-1|AAQ16286.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP54 protein.
          Length = 176

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 513 ICSLXVRVPKLGASSKDDLDEIETDESASGVKLETDFEQSIDEIANK 653
           +C+L  ++  LG  + DDL E +  E     +LE D++ +   IA +
Sbjct: 71  MCTLECKLKSLGLLNGDDLVEAKVQEYID--RLEGDWKGTAKTIATE 115


>AJ618924-1|CAF02003.1|  144|Anopheles gambiae odorant-binding
           protein OBP5470 protein.
          Length = 144

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 513 ICSLXVRVPKLGASSKDDLDEIETDESASGVKLETDFEQSIDEIANK 653
           +C+L  ++  LG  + DDL E +  E     +LE D++ +   IA +
Sbjct: 34  MCTLECKLKSLGLLNGDDLVEAKVQEYID--RLEGDWKGTAKTIATE 78


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 856,487
Number of Sequences: 2352
Number of extensions: 19110
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)