Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_B24
         (871 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L42512-1|AAC41608.1| 1212|Drosophila melanogaster shortsighted c...    34   0.29 
AE014134-2212|ABI31313.1| 1097|Drosophila melanogaster CG5461-PF...    34   0.29 
AE014134-2211|AAF53201.2| 1206|Drosophila melanogaster CG5461-PA...    34   0.29 
AY119485-1|AAM50139.1|  846|Drosophila melanogaster GH07623p pro...    30   3.6  
AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA...    30   3.6  
AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB...    30   3.6  
AE014297-3888|AAF56541.1| 1270|Drosophila melanogaster CG8968-PA...    30   4.8  

>L42512-1|AAC41608.1| 1212|Drosophila melanogaster shortsighted
           class 2 protein.
          Length = 1212

 Score = 33.9 bits (74), Expect = 0.29
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
 Frame = +3

Query: 429 GGGRRAACLVGQAP*MAATSPQGSPSVKICSLXVRVPKLGAS------SKDDLDEIETDE 590
           GGG  +    G A       P+ + S +I S+ V  PKL A+      S DDLDE  TD+
Sbjct: 349 GGGGGSGSSSGTAAGGTNRKPKTTSSFEITSVTVGHPKLNAAGDTGDESADDLDESHTDD 408

Query: 591 SASGVKLETDFEQSIDEIANKK 656
           ++    LE +     ++  +K+
Sbjct: 409 NSRITDLENETPSMSEDTFSKE 430


>AE014134-2212|ABI31313.1| 1097|Drosophila melanogaster CG5461-PF,
           isoform F protein.
          Length = 1097

 Score = 33.9 bits (74), Expect = 0.29
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
 Frame = +3

Query: 429 GGGRRAACLVGQAP*MAATSPQGSPSVKICSLXVRVPKLGAS------SKDDLDEIETDE 590
           GGG  +    G A       P+ + S +I S+ V  PKL A+      S DDLDE  TD+
Sbjct: 241 GGGGGSGSSSGTAAGGTNRKPKTTSSFEITSVTVGHPKLNAAGDTGDESADDLDESHTDD 300

Query: 591 SASGVKLETDFEQSIDEIANKK 656
           ++    LE +     ++  +K+
Sbjct: 301 NSRITDLENETPSMSEDTFSKE 322


>AE014134-2211|AAF53201.2| 1206|Drosophila melanogaster CG5461-PA,
           isoform A protein.
          Length = 1206

 Score = 33.9 bits (74), Expect = 0.29
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
 Frame = +3

Query: 429 GGGRRAACLVGQAP*MAATSPQGSPSVKICSLXVRVPKLGAS------SKDDLDEIETDE 590
           GGG  +    G A       P+ + S +I S+ V  PKL A+      S DDLDE  TD+
Sbjct: 350 GGGGGSGSSSGTAAGGTNRKPKTTSSFEITSVTVGHPKLNAAGDTGDESADDLDESHTDD 409

Query: 591 SASGVKLETDFEQSIDEIANKK 656
           ++    LE +     ++  +K+
Sbjct: 410 NSRITDLENETPSMSEDTFSKE 431


>AY119485-1|AAM50139.1|  846|Drosophila melanogaster GH07623p
           protein.
          Length = 846

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
 Frame = +3

Query: 501 PSVKICSLXVRVPKLGAS-SKDDLDE--IETDESASGVKLETDFEQSIDEIANKKVQANG 671
           P+V+  +L   VP L A  S D L++  +ET+   +  + E+  E   +E  ++  Q   
Sbjct: 637 PTVEPQTLADSVPDLPAKESMDTLEDEKVETNVEENKSEEESKPENPPEECVDEPAQVGD 696

Query: 672 VQPPPRTAIRNTSSVP 719
           V+ PP+ A +  + VP
Sbjct: 697 VEDPPQDADKPATPVP 712


>AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA,
            isoform A protein.
          Length = 1109

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
 Frame = +3

Query: 501  PSVKICSLXVRVPKLGAS-SKDDLDE--IETDESASGVKLETDFEQSIDEIANKKVQANG 671
            P+V+  +L   VP L A  S D L++  +ET+   +  + E+  E   +E  ++  Q   
Sbjct: 900  PTVEPQTLADSVPDLPAKESMDTLEDEKVETNVEENKSEEESKPENPPEECVDEPAQVGD 959

Query: 672  VQPPPRTAIRNTSSVP 719
            V+ PP+ A +  + VP
Sbjct: 960  VEDPPQDADKPATPVP 975


>AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB,
            isoform B protein.
          Length = 1150

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
 Frame = +3

Query: 501  PSVKICSLXVRVPKLGAS-SKDDLDE--IETDESASGVKLETDFEQSIDEIANKKVQANG 671
            P+V+  +L   VP L A  S D L++  +ET+   +  + E+  E   +E  ++  Q   
Sbjct: 900  PTVEPQTLADSVPDLPAKESMDTLEDEKVETNVEENKSEEESKPENPPEECVDEPAQVGD 959

Query: 672  VQPPPRTAIRNTSSVP 719
            V+ PP+ A +  + VP
Sbjct: 960  VEDPPQDADKPATPVP 975


>AE014297-3888|AAF56541.1| 1270|Drosophila melanogaster CG8968-PA
           protein.
          Length = 1270

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
 Frame = +3

Query: 552 SSKDDLDEIETD-ESASGVKLET----DFEQSIDE--IANKKVQANG--VQPPPRTAIRN 704
           SSKD  ++   D E A  + +E     DFE   D    A  K ++ G  +QPPPR  +R+
Sbjct: 236 SSKDTKNDSSLDYEDAKDLPIELRRLEDFEDFPDPPLSAGLKSRSLGSILQPPPRQIVRS 295

Query: 705 TSSVP 719
            SSVP
Sbjct: 296 RSSVP 300


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,173,316
Number of Sequences: 53049
Number of extensions: 820933
Number of successful extensions: 2109
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2100
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)