Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_B22
         (852 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29378-10|AAP40541.1|  975|Caenorhabditis elegans Adamts family ...    29   3.2  
U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family p...    29   3.2  
AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like p...    29   3.2  
Z69302-6|CAL36504.1|  472|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U29488-4|AAL27235.1|  401|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AF067940-8|AAC19200.1|  518|Caenorhabditis elegans Hypothetical ...    29   4.2  
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n...    29   5.5  
Z83237-2|CAB05789.1|  258|Caenorhabditis elegans Hypothetical pr...    28   7.3  
AF098992-9|AAC67451.1|  425|Caenorhabditis elegans Hypothetical ...    28   7.3  
Z74042-16|CAA98527.3|  512|Caenorhabditis elegans Hypothetical p...    28   9.7  
Z74042-15|CAD54157.1|  505|Caenorhabditis elegans Hypothetical p...    28   9.7  
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    28   9.7  
AF068721-1|AAC19263.1|  369|Caenorhabditis elegans Hypothetical ...    28   9.7  
AC024748-4|AAF60410.1|  251|Caenorhabditis elegans Hypothetical ...    28   9.7  

>U29378-10|AAP40541.1|  975|Caenorhabditis elegans Adamts family
           protein 2, isoform c protein.
          Length = 975

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +3

Query: 645 WICCSSTCRPGTTTRQ-*LSRSPC 713
           W  CS++C PGT  RQ   +R PC
Sbjct: 822 WSTCSTSCGPGTLVRQRTCNREPC 845


>U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family
           protein 2, isoform a protein.
          Length = 1020

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +3

Query: 645 WICCSSTCRPGTTTRQ-*LSRSPC 713
           W  CS++C PGT  RQ   +R PC
Sbjct: 822 WSTCSTSCGPGTLVRQRTCNREPC 845


>AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like
           protease protein.
          Length = 1020

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +3

Query: 645 WICCSSTCRPGTTTRQ-*LSRSPC 713
           W  CS++C PGT  RQ   +R PC
Sbjct: 822 WSTCSTSCGPGTLVRQRTCNREPC 845


>Z69302-6|CAL36504.1|  472|Caenorhabditis elegans Hypothetical
           protein F40F8.11 protein.
          Length = 472

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 15/55 (27%), Positives = 23/55 (41%)
 Frame = +3

Query: 15  TTHCPPIMSAGRHEMDPHDDWKSAERPNYLTNVDLEYPVLRATVHSAVQAAQAPL 179
           TT  P      RH   P+  W S  +  +L  +D   P  + +V    +AA  P+
Sbjct: 71  TTSKPVQKPYRRHHQRPNKAWSSGSQQFHLVTIDPSKPHEKPSVSKIAEAAPKPI 125


>U29488-4|AAL27235.1|  401|Caenorhabditis elegans Hypothetical
           protein C56C10.7a protein.
          Length = 401

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/53 (26%), Positives = 28/53 (52%)
 Frame = -1

Query: 459 NDSRNVSGAVRNDGRAHERHYFDRVILDVSPGVAVVLVAHRDSVGDLAILVRP 301
           N +++V    + +  ++   + ++V LD S    V  +AH D  GD+  L++P
Sbjct: 185 NANQDVYLEAQIENTSNANMFLEKVELDPSQHYNVTSIAHEDEFGDVGKLLKP 237


>AF067940-8|AAC19200.1|  518|Caenorhabditis elegans Hypothetical
           protein F36F12.1 protein.
          Length = 518

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 18/66 (27%), Positives = 30/66 (45%)
 Frame = -1

Query: 363 VAVVLVAHRDSVGDLAILVRPVAGLLVLSVYVVAVTEARIQSPVDDTSLTPVVDMLDQLS 184
           VA+V   H+D+V DL   +  + G    + +V        Q+P +    T V+   + L 
Sbjct: 80  VAIVATMHKDAVTDLNDFILKIVGTNSTNRFVTDGKLTTEQNPDESCKYTTVLIQTNTLD 139

Query: 183 SEGELE 166
           S  +LE
Sbjct: 140 SMSKLE 145


>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
            Prion-like-(q/n-rich)-domain-bearingprotein protein 20
            protein.
          Length = 1254

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +3

Query: 318  QDPQQNPGARRERLRHPGLHQG*LGQNSDAHERAHHSEQRQRHYE 452
            Q   Q+PGA      HP +H   L Q+    ++ HH E    H++
Sbjct: 1155 QQQHQHPGAGGHLQLHPQMHMQMLPQHH--QQQQHHEEMMMMHHQ 1197


>Z83237-2|CAB05789.1|  258|Caenorhabditis elegans Hypothetical
           protein R06B9.2 protein.
          Length = 258

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +1

Query: 595 TDNDGLARGFPQQATSYGSAVQVRVDRGLRQGSDYHE 705
           T  DGLA+  PQ++   G+ +Q  +  G R+   +H+
Sbjct: 202 TVKDGLAKILPQRSQENGNIIQGGILNGFRERGIFHD 238


>AF098992-9|AAC67451.1|  425|Caenorhabditis elegans Hypothetical
           protein F53C3.11 protein.
          Length = 425

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 325 GSCDPCPARCWPLGTVGLRCSSYG 254
           G+   C  +CW   TV   CS YG
Sbjct: 142 GADSICKNKCWKCATVAKNCSDYG 165


>Z74042-16|CAA98527.3|  512|Caenorhabditis elegans Hypothetical
           protein T11F9.2b protein.
          Length = 512

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -1

Query: 423 DGRAHERHYFDRVILDVSPGVAVVLVAHRDSVGDLAILVRPVAGL 289
           DG +    + D ++  +S G+AV+       +G LAILV+   GL
Sbjct: 369 DGMSMGAAFSDNLLRGLSIGIAVISQQFPQELGTLAILVKSGLGL 413


>Z74042-15|CAD54157.1|  505|Caenorhabditis elegans Hypothetical
           protein T11F9.2a protein.
          Length = 505

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -1

Query: 423 DGRAHERHYFDRVILDVSPGVAVVLVAHRDSVGDLAILVRPVAGL 289
           DG +    + D ++  +S G+AV+       +G LAILV+   GL
Sbjct: 362 DGMSMGAAFSDNLLRGLSIGIAVISQQFPQELGTLAILVKSGLGL 406


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +3

Query: 339 GARRERLRHPGLHQG*LGQNSDAHERAHHSEQRQRHY 449
           GA  E   H G H G      + H   HHS+  ++ +
Sbjct: 690 GAHHEHGAHHGAHHGHHDDKENHHHHGHHSKHSKKQH 726


>AF068721-1|AAC19263.1|  369|Caenorhabditis elegans Hypothetical
           protein ZK1055.5 protein.
          Length = 369

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 367 RAYIKDDSVKIVTLMSAPIIPNSARDITRIVNERVGMVVIYGM 495
           RAYI D   +   +    I+   ARD+ R+V++  G+ + Y M
Sbjct: 134 RAYIPDGEQRDYLMNKYNIVTWHARDVLRLVDDMSGISMHYAM 176


>AC024748-4|AAF60410.1|  251|Caenorhabditis elegans Hypothetical
           protein Y110A2AR.1 protein.
          Length = 251

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = +1

Query: 142 PYIAQYKLLKLPFTGELIEHVDYW---GEGSIVNGGLYSGFRNCY 267
           P I  +K+LK P    LIE + YW   G   IV+  L + + +C+
Sbjct: 17  PVIGSFKVLKKPTKPRLIECMHYWTIYGSFLIVDWFLSTFYVSCF 61


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,575,745
Number of Sequences: 27780
Number of extensions: 361053
Number of successful extensions: 1083
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)