Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_B20
(856 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC098300-1|AAH98300.1| 566|Homo sapiens chromosome 1 open readi... 36 0.14
BC098266-1|AAH98266.1| 566|Homo sapiens hypothetical protein LO... 36 0.14
BC034221-1|AAH34221.1| 566|Homo sapiens chromosome 1 open readi... 36 0.14
AL596225-1|CAH72320.1| 566|Homo sapiens chromosome 1 open readi... 36 0.14
AL359373-1|CAI16124.1| 566|Homo sapiens chromosome 1 open readi... 36 0.14
AL122004-7|CAI22343.1| 566|Homo sapiens chromosome 1 open readi... 36 0.14
AL713888-4|CAI15118.1| 2136|Homo sapiens leukemia-associated pro... 33 1.3
AL513534-3|CAH70220.1| 2136|Homo sapiens leukemia-associated pro... 33 1.3
AF430147-1|AAM88301.1| 2136|Homo sapiens leukemia-associated pro... 33 1.3
BC104956-1|AAI04957.1| 1700|Homo sapiens SKIP protein protein. 32 3.1
BC104954-1|AAI04955.1| 1700|Homo sapiens SKIP protein protein. 32 3.1
AB051465-1|BAB21769.1| 1302|Homo sapiens KIAA1678 protein protein. 32 3.1
BC032561-1|AAH32561.1| 553|Homo sapiens UIMC1 protein protein. 31 5.3
BC001302-1|AAH01302.1| 495|Homo sapiens RAD18 homolog (S. cerev... 31 5.3
AY961989-1|AAX44049.1| 495|Homo sapiens RAD18 homolog (S. cerev... 31 5.3
AY004333-1|AAF86618.1| 495|Homo sapiens RAD18 protein. 31 5.3
AK222771-1|BAD96491.1| 495|Homo sapiens postreplication repair ... 31 5.3
AK023075-1|BAB14392.1| 495|Homo sapiens protein ( Homo sapiens ... 31 5.3
AF284753-1|AAG59855.1| 349|Homo sapiens X2HRIP110 protein. 31 5.3
AF284749-1|AAG59851.1| 641|Homo sapiens XHRIP110 protein. 31 5.3
AF169796-1|AAF80856.1| 484|Homo sapiens zinc finger DNA binding... 31 5.3
AF113538-1|AAF14875.1| 349|Homo sapiens retinoid x receptor int... 31 5.3
AB035274-1|BAA99284.1| 495|Homo sapiens postreplication repair ... 31 5.3
BC068478-1|AAH68478.1| 489|Homo sapiens chromosome 1 open readi... 30 9.3
AL117352-7|CAB81621.1| 489|Homo sapiens chromosome 1 open readi... 30 9.3
AK027613-1|BAB55232.1| 489|Homo sapiens protein ( Homo sapiens ... 30 9.3
>BC098300-1|AAH98300.1| 566|Homo sapiens chromosome 1 open reading
frame 164 protein.
Length = 566
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 216 SELPNCPVCSCTVRQGELEHHLDLELARLNKLTGS 320
S+ P CP+C +R EL+ H++ EL +L +L S
Sbjct: 219 SQAPICPICQVLLRPSELQEHMEQELEQLAQLPSS 253
>BC098266-1|AAH98266.1| 566|Homo sapiens hypothetical protein
LOC55182 protein.
Length = 566
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 216 SELPNCPVCSCTVRQGELEHHLDLELARLNKLTGS 320
S+ P CP+C +R EL+ H++ EL +L +L S
Sbjct: 219 SQAPICPICQVLLRPSELQEHMEQELEQLAQLPSS 253
>BC034221-1|AAH34221.1| 566|Homo sapiens chromosome 1 open reading
frame 164 protein.
Length = 566
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 216 SELPNCPVCSCTVRQGELEHHLDLELARLNKLTGS 320
S+ P CP+C +R EL+ H++ EL +L +L S
Sbjct: 219 SQAPICPICQVLLRPSELQEHMEQELEQLAQLPSS 253
>AL596225-1|CAH72320.1| 566|Homo sapiens chromosome 1 open reading
frame 164 protein.
Length = 566
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 216 SELPNCPVCSCTVRQGELEHHLDLELARLNKLTGS 320
S+ P CP+C +R EL+ H++ EL +L +L S
Sbjct: 219 SQAPICPICQVLLRPSELQEHMEQELEQLAQLPSS 253
>AL359373-1|CAI16124.1| 566|Homo sapiens chromosome 1 open reading
frame 164 protein.
Length = 566
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 216 SELPNCPVCSCTVRQGELEHHLDLELARLNKLTGS 320
S+ P CP+C +R EL+ H++ EL +L +L S
Sbjct: 219 SQAPICPICQVLLRPSELQEHMEQELEQLAQLPSS 253
>AL122004-7|CAI22343.1| 566|Homo sapiens chromosome 1 open reading
frame 164 protein.
Length = 566
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 216 SELPNCPVCSCTVRQGELEHHLDLELARLNKLTGS 320
S+ P CP+C +R EL+ H++ EL +L +L S
Sbjct: 219 SQAPICPICQVLLRPSELQEHMEQELEQLAQLPSS 253
>AL713888-4|CAI15118.1| 2136|Homo sapiens leukemia-associated protein
with a CXXC domain protein.
Length = 2136
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 507 PPQNGECPVCNTTLPTS-KLQRHALRCLXGTGAEMDEDIPDTSSEEGSI 650
PP+N E CN L +S KL L C T +++ED+ ++ SI
Sbjct: 1039 PPRNNEVEYCNQLLDSSKKLDSDDLSCQDATHTQIEEDVATQLTQLASI 1087
>AL513534-3|CAH70220.1| 2136|Homo sapiens leukemia-associated protein
with a CXXC domain protein.
Length = 2136
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 507 PPQNGECPVCNTTLPTS-KLQRHALRCLXGTGAEMDEDIPDTSSEEGSI 650
PP+N E CN L +S KL L C T +++ED+ ++ SI
Sbjct: 1039 PPRNNEVEYCNQLLDSSKKLDSDDLSCQDATHTQIEEDVATQLTQLASI 1087
>AF430147-1|AAM88301.1| 2136|Homo sapiens leukemia-associated protein
with a CXXC domain protein.
Length = 2136
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 507 PPQNGECPVCNTTLPTS-KLQRHALRCLXGTGAEMDEDIPDTSSEEGSI 650
PP+N E CN L +S KL L C T +++ED+ ++ SI
Sbjct: 1039 PPRNNEVEYCNQLLDSSKKLDSDDLSCQDATHTQIEEDVATQLTQLASI 1087
>BC104956-1|AAI04957.1| 1700|Homo sapiens SKIP protein protein.
Length = 1700
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 616 SSSISAPVPXRHLKACLCSLEVGKVVLQTGHSPFCGG 506
+SS PVP H + LCS EV + ++T C G
Sbjct: 1405 TSSCQDPVPINHKRRSLCSREVPLIQIETDQREACAG 1441
>BC104954-1|AAI04955.1| 1700|Homo sapiens SKIP protein protein.
Length = 1700
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 616 SSSISAPVPXRHLKACLCSLEVGKVVLQTGHSPFCGG 506
+SS PVP H + LCS EV + ++T C G
Sbjct: 1405 TSSCQDPVPINHKRRSLCSREVPLIQIETDQREACAG 1441
>AB051465-1|BAB21769.1| 1302|Homo sapiens KIAA1678 protein protein.
Length = 1302
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 616 SSSISAPVPXRHLKACLCSLEVGKVVLQTGHSPFCGG 506
+SS PVP H + LCS EV + ++T C G
Sbjct: 1036 TSSCQDPVPINHKRRSLCSREVPLIQIETDQREACAG 1072
>BC032561-1|AAH32561.1| 553|Homo sapiens UIMC1 protein protein.
Length = 553
Score = 31.1 bits (67), Expect = 5.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 525 CPVCNTTLPTSKLQRHALRC 584
CP+C+ P +K++RHA+ C
Sbjct: 339 CPLCDQCFPPTKIERHAMYC 358
>BC001302-1|AAH01302.1| 495|Homo sapiens RAD18 homolog (S.
cerevisiae) protein.
Length = 495
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 192 SVRSRKKVSELPNCPVCSCTVRQGELEHHLDLELARLNK---LTGSASKRK 335
S + K+V+++ +CPVC + + + HLD L+R K L S KRK
Sbjct: 192 STSTLKQVTKV-DCPVCGVNIPESHINKHLDSCLSREEKKESLRSSVHKRK 241
>AY961989-1|AAX44049.1| 495|Homo sapiens RAD18 homolog (S.
cerevisiae) protein.
Length = 495
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 192 SVRSRKKVSELPNCPVCSCTVRQGELEHHLDLELARLNK---LTGSASKRK 335
S + K+V+++ +CPVC + + + HLD L+R K L S KRK
Sbjct: 192 STSTLKQVTKV-DCPVCGVNIPESHINKHLDSCLSREEKKESLRSSVHKRK 241
>AY004333-1|AAF86618.1| 495|Homo sapiens RAD18 protein.
Length = 495
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 192 SVRSRKKVSELPNCPVCSCTVRQGELEHHLDLELARLNK---LTGSASKRK 335
S + K+V+++ +CPVC + + + HLD L+R K L S KRK
Sbjct: 192 STSTLKQVTKV-DCPVCGVNIPESHINKHLDSCLSREEKKESLRSSVHKRK 241
>AK222771-1|BAD96491.1| 495|Homo sapiens postreplication repair
protein hRAD18p variant protein.
Length = 495
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 192 SVRSRKKVSELPNCPVCSCTVRQGELEHHLDLELARLNK---LTGSASKRK 335
S + K+V+++ +CPVC + + + HLD L+R K L S KRK
Sbjct: 192 STSTLKQVTKV-DCPVCGVNIPESHINKHLDSCLSREEKKESLRSSVHKRK 241
>AK023075-1|BAB14392.1| 495|Homo sapiens protein ( Homo sapiens
cDNA FLJ13013 fis, clone NT2RP3000590, weakly similar to
UVS-2 PROTEIN. ).
Length = 495
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 192 SVRSRKKVSELPNCPVCSCTVRQGELEHHLDLELARLNK---LTGSASKRK 335
S + K+V+++ +CPVC + + + HLD L+R K L S KRK
Sbjct: 192 STSTLKQVTKV-DCPVCGVNIPESHINKHLDSCLSREEKKESLRSSVHKRK 241
>AF284753-1|AAG59855.1| 349|Homo sapiens X2HRIP110 protein.
Length = 349
Score = 31.1 bits (67), Expect = 5.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 525 CPVCNTTLPTSKLQRHALRC 584
CP+C+ P +K++RHA+ C
Sbjct: 135 CPLCDQCFPPTKIERHAMYC 154
>AF284749-1|AAG59851.1| 641|Homo sapiens XHRIP110 protein.
Length = 641
Score = 31.1 bits (67), Expect = 5.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 525 CPVCNTTLPTSKLQRHALRC 584
CP+C+ P +K++RHA+ C
Sbjct: 427 CPLCDQCFPPTKIERHAMYC 446
>AF169796-1|AAF80856.1| 484|Homo sapiens zinc finger DNA binding
protein protein.
Length = 484
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 192 SVRSRKKVSELPNCPVCSCTVRQGELEHHLDLELARLNK---LTGSASKRK 335
S + K+V+++ +CPVC + + + HLD L+R K L S KRK
Sbjct: 192 STSTLKQVTKV-DCPVCGVNIPESHINKHLDSCLSREEKKESLRSSVHKRK 241
>AF113538-1|AAF14875.1| 349|Homo sapiens retinoid x receptor
interacting protein protein.
Length = 349
Score = 31.1 bits (67), Expect = 5.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 525 CPVCNTTLPTSKLQRHALRC 584
CP+C+ P +K++RHA+ C
Sbjct: 135 CPLCDQCFPPTKIERHAMYC 154
>AB035274-1|BAA99284.1| 495|Homo sapiens postreplication repair
protein hRAD18p protein.
Length = 495
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 192 SVRSRKKVSELPNCPVCSCTVRQGELEHHLDLELARLNK---LTGSASKRK 335
S + K+V+++ +CPVC + + + HLD L+R K L S KRK
Sbjct: 192 STSTLKQVTKV-DCPVCGVNIPESHINKHLDSCLSREEKKESLRSSVHKRK 241
>BC068478-1|AAH68478.1| 489|Homo sapiens chromosome 1 open reading
frame 124 protein.
Length = 489
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 168 YDENVILNSVRSRKKVSELPNCPVCSCTVRQGELEHHLD 284
Y NS S + S++ NCPVC V + ++ HLD
Sbjct: 436 YSTTTAQNSSSSSSQ-SKMVNCPVCQNEVLESQINEHLD 473
>AL117352-7|CAB81621.1| 489|Homo sapiens chromosome 1 open reading
frame 124 protein.
Length = 489
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 168 YDENVILNSVRSRKKVSELPNCPVCSCTVRQGELEHHLD 284
Y NS S + S++ NCPVC V + ++ HLD
Sbjct: 436 YSTTTAQNSSSSSSQ-SKMVNCPVCQNEVLESQINEHLD 473
>AK027613-1|BAB55232.1| 489|Homo sapiens protein ( Homo sapiens
cDNA FLJ14707 fis, clone NT2RP3000599. ).
Length = 489
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 168 YDENVILNSVRSRKKVSELPNCPVCSCTVRQGELEHHLD 284
Y NS S + S++ NCPVC V + ++ HLD
Sbjct: 436 YSTTTAQNSSSSSSQ-SKMVNCPVCQNEVLESQINEHLD 473
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,368,165
Number of Sequences: 237096
Number of extensions: 2249927
Number of successful extensions: 4283
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4283
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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