Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_B18
(848 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0211 - 13043968-13044646,13044752-13045037,13045903-130459... 34 0.16
10_08_0357 - 17158414-17160150,17160534-17160710 31 0.88
10_02_0175 - 6207485-6207898 31 0.88
12_02_0254 + 16451683-16451985 31 1.5
08_02_1148 - 24693323-24693877,24694092-24694315,24694519-246946... 31 1.5
06_01_0731 + 5380500-5380631,5380717-5380767,5381844-5381889,538... 31 1.5
06_03_1409 - 29966787-29966990,29967150-29967413,29968098-299682... 30 2.0
04_03_0856 + 20336390-20336906,20337276-20337397 30 2.0
02_01_0737 + 5492446-5492770,5492818-5493614 30 2.0
06_03_0270 + 19009412-19009888,19009936-19011048,19011810-190118... 30 2.7
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859... 29 3.5
06_01_0407 + 2901321-2901739,2902673-2902825,2902899-2902981,290... 29 3.5
05_04_0124 + 18232961-18236636,18236810-18237288,18237549-182376... 29 3.5
03_03_0147 + 14838707-14838734,14839316-14839430,14839464-148396... 29 3.5
01_06_0390 - 28938485-28938751,28939924-28941282 29 3.5
01_04_0083 - 15838922-15839065,15839153-15839443,15839555-158396... 29 3.5
12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722... 29 4.7
09_02_0184 - 5485231-5485743 29 4.7
08_02_0631 - 19509416-19509868 29 4.7
08_01_0966 + 9751198-9751530,9752182-9752337,9753145-9753240,975... 29 4.7
08_01_0337 - 2994086-2995489 29 4.7
06_03_1501 + 30612643-30613310,30613396-30613501,30613732-306139... 29 4.7
05_05_0076 - 22222162-22222423,22222595-22222818 29 4.7
04_04_0440 - 25219961-25221529 29 4.7
01_02_0092 + 11057604-11057717,11058998-11059531,11060036-110601... 29 4.7
12_01_0909 - 8828921-8829004,8829204-8829249,8829798-8829919,883... 29 6.2
10_08_0973 - 21963754-21963936,21964089-21964383,21964504-219646... 29 6.2
06_03_0732 + 23965090-23965431,23965610-23965746,23967359-239674... 29 6.2
04_04_0641 + 26896986-26897257,26897263-26897437 29 6.2
02_02_0131 - 7065762-7065813,7065907-7065992,7066080-7066150,706... 29 6.2
12_01_0182 + 1345209-1347065 28 8.2
11_06_0542 + 24777453-24777632,24777654-24778478,24778576-247793... 28 8.2
11_02_0137 - 8702661-8703495,8703820-8704628 28 8.2
09_02_0465 - 9594866-9595672,9596036-9597496 28 8.2
06_01_0728 - 5356400-5356676,5356888-5357090,5357181-5357474,535... 28 8.2
05_03_0458 + 14280953-14281866,14281964-14282912 28 8.2
04_04_0439 - 25207950-25209629 28 8.2
04_03_0984 - 21432119-21432157,21432722-21434068 28 8.2
03_06_0311 + 33054022-33054118,33056109-33056353,33057058-330573... 28 8.2
01_06_0683 - 31173763-31174635,31175146-31175436 28 8.2
01_01_0012 + 71903-72935,73468-73981,74619-76008 28 8.2
>06_02_0211 -
13043968-13044646,13044752-13045037,13045903-13045979,
13046039-13046139,13046348-13046412,13048296-13048581
Length = 497
Score = 33.9 bits (74), Expect = 0.16
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = -2
Query: 334 PGRRPGENARRLEGDGAVSTNRPDCDCTLRASQRHDVSASQGAAPHGGSV*CNRPHHPHV 155
P R P ++A R DC LR +HD S+++ P RPH ++
Sbjct: 347 PARSPPDHAGRYADPVQRERMGFRGDCQLRDRVKHDWSSAEDYNPR------ERPHDMYL 400
Query: 154 EAAHHR-VRPSDVWQEPTQRSSRRHQSGGQL 65
E + R V P D W R R +GG+L
Sbjct: 401 ERSRRRSVSPRDNWGH-NMRDRSRSPAGGRL 430
>10_08_0357 - 17158414-17160150,17160534-17160710
Length = 637
Score = 31.5 bits (68), Expect = 0.88
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -2
Query: 337 VPGRRPGENARRLEGDGAVSTNRPDCDCTLRASQRHDVSASQGAAPH 197
V RRP +RR DG V T R D + LR+ ++ G A H
Sbjct: 84 VEQRRPASPSRRPLEDGVVETRRMDDNALLRSLVEKGLAVKTGTAAH 130
>10_02_0175 - 6207485-6207898
Length = 137
Score = 31.5 bits (68), Expect = 0.88
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = +1
Query: 247 AACNRSQGDSWIPHRLLRGGVRSRRDASLGPGGGGA 354
AA R + W R RGG R R DA G GGGGA
Sbjct: 56 AAARRGEWRRWRQRR--RGGGRRRPDAVKGGGGGGA 89
>12_02_0254 + 16451683-16451985
Length = 100
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 573 RKVRRPWSRFAHFARTGRTASTVRRPADG-SAKRRDHASNTDRRDWSLRALI 421
R+ R WS+ + GR S R+PA G + + RR WS+R +
Sbjct: 6 RRWGRGWSQLQRWEGVGRKRSRQRKPAGGIEGEVEEDGEAWSRRRWSMRGSV 57
>08_02_1148 -
24693323-24693877,24694092-24694315,24694519-24694636,
24694761-24695132,24696998-24697324
Length = 531
Score = 30.7 bits (66), Expect = 1.5
Identities = 29/95 (30%), Positives = 35/95 (36%), Gaps = 3/95 (3%)
Frame = +3
Query: 279 DTAPSPSRRRAFSPGRLPGTWRRRRSLPIMRGVVTFATGGNHVP---EKEQLERGGSNLG 449
D P SPG P WRRRR + RG GG ++L GG G
Sbjct: 8 DLPPRAGAGAGASPG-WPQRWRRRRQRGVERGGAVSGGGGGVFSIGVGGKKLHHGGGG-G 65
Query: 450 GLCWRRGLAAWRTRRPVSGPSRRCARSSRNGRTVT 554
G LA R V+G S ++ GR T
Sbjct: 66 GEMTEEELAKVEGRVCVNGASAAACLHTQQGRKGT 100
>06_01_0731 +
5380500-5380631,5380717-5380767,5381844-5381889,
5383356-5383495
Length = 122
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 295 LRGGVRSRRDASLGPGGGGARCRLCVA 375
LR G RD ++ PG G ARC C++
Sbjct: 11 LRSGAHLHRDPTMNPGLGSARCPRCLS 37
>06_03_1409 -
29966787-29966990,29967150-29967413,29968098-29968241,
29969000-29969329
Length = 313
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 238 ATPAACNRSQGDSWIPHRLLRGGV-RSRRDASLGPG 342
A PA RS+ D+WI RL GGV R+R AS+ G
Sbjct: 64 AVPAGEGRSRIDAWISARLGGGGVSRARIQASIRAG 99
>04_03_0856 + 20336390-20336906,20337276-20337397
Length = 212
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/73 (32%), Positives = 33/73 (45%)
Frame = -1
Query: 737 QGHGXAPPMRGNMRAYXRPCPRRSHSGDTPSSVPSGQRDAGTGRNTHGR*AFASTGR*DA 558
+G AP G RA+ P P S + P+ +G++D G G + G A AS R
Sbjct: 14 RGDASAPTRVGRRRAF--PLPFASPPPEWPAGKLAGRKDGGGGASLEGAAAGASRRR--- 68
Query: 557 LGHGSPISRGPGA 519
G G RG G+
Sbjct: 69 -GGGGGQIRGGGS 80
>02_01_0737 + 5492446-5492770,5492818-5493614
Length = 373
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/28 (57%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +1
Query: 139 GGAPPLRGGGAVYCIIRSPRV--VPRLD 216
G APPL G VY I R PRV RLD
Sbjct: 112 GAAPPLAQAGVVYAISRRPRVRLATRLD 139
>06_03_0270 +
19009412-19009888,19009936-19011048,19011810-19011899,
19011928-19012027,19012135-19012333,19012559-19012679
Length = 699
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -1
Query: 674 RRSHSGDTPSSVPSGQRDAGTGRNTHGR*AFASTGR*DALGHGSPISRGPGAPPRRSG 501
R + SG +P SVP +R + A A + R + G +RG P RSG
Sbjct: 60 REARSGRSPRSVPPSRRSPTPSSSPSTASAAARSSRTPSAAPGGTSARGSSTPGGRSG 117
>11_06_0561 -
24984960-24985205,24985283-24985354,24985906-24985977,
24986612-24986782,24987464-24987653,24987733-24987976,
24988162-24988474,24988687-24989517,24989628-24989672,
24989677-24989790,24989877-24990371,24990627-24990824,
24990902-24991357
Length = 1148
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = -1
Query: 662 SGDTPSSVPSGQRDAGTGRNTHGR*AFASTGR*DALGHGSPISRGPGAPPRRSG 501
+G T + + RD G ++H AS+G GSP R PP +G
Sbjct: 16 AGATAAGEEAAARDEDAGTSSHAVAGEASSGAGGGADGGSPAPRAASPPPTAAG 69
>06_01_0407 +
2901321-2901739,2902673-2902825,2902899-2902981,
2903081-2903180,2904580-2904693,2905292-2905434,
2905825-2905919
Length = 368
Score = 29.5 bits (63), Expect = 3.5
Identities = 31/81 (38%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Frame = +2
Query: 407 PGEGAIRARRLQSRR--SVLEAWSRRLADPSAG-LRTVEAVRPVLAKWANRDQGR-LTFR 574
PG A RAR S R SV AW RR D SAG + A + A A +GR
Sbjct: 51 PGS-APRARCPDSSRPLSVSVAWDRRPGDASAGAVAAAGAAVDLPASHATGSRGRHKVMA 109
Query: 575 LTQMLTGHGCFGRYLHRVARR 637
+ TG G GR R RR
Sbjct: 110 FVGIFTGFGSVGR--RRALRR 128
>05_04_0124 + 18232961-18236636,18236810-18237288,18237549-18237629,
18238033-18238041,18238096-18238248
Length = 1465
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 653 CHHCDCDEDTVXHTLAYCPAWVEXPRVLVSQIGPDLSLP 769
C CD E+T+ H L CP + V++S IG LP
Sbjct: 1273 CVLCDQHEETIDHILIACPESRQLWWVVLSSIGLPQCLP 1311
>03_03_0147 +
14838707-14838734,14839316-14839430,14839464-14839697,
14840571-14840667
Length = 157
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 169 HHPHVEAAHHRVRPSDVWQEPTQRSSRRHQSGG 71
HH HV H + P V E ++R +++ SGG
Sbjct: 114 HHDHVLIRQHHISPLAVSLEGSKRKNQKEASGG 146
>01_06_0390 - 28938485-28938751,28939924-28941282
Length = 541
Score = 29.5 bits (63), Expect = 3.5
Identities = 23/73 (31%), Positives = 29/73 (39%)
Frame = +1
Query: 112 LAKRRRA*HGGAPPLRGGGAVYCIIRSPRVVPRLDSQKRRGAATPAACNRSQGDSWIPHR 291
LA + A GGA LR G V + SP +VP L S+ G + G S
Sbjct: 38 LAVKSAAGEGGAEQLRREGRVMSGLCSPHIVPCLGSRAAAGGEYQLFLEFAPGGSLADEA 97
Query: 292 LLRGGVRSRRDAS 330
GG + R S
Sbjct: 98 ARSGGRLAERAIS 110
>01_04_0083 -
15838922-15839065,15839153-15839443,15839555-15839653,
15839733-15839825,15839913-15840116,15840209-15840459,
15841045-15841096,15841527-15841625,15842222-15842299
Length = 436
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +3
Query: 243 ARSVQSQSGRFVDTAPSPSRRRAFSPGRLPGTWRRRRSLPIMRGVVTFATGGNHVP 410
AR + Q + AP PSR G PG+ R R L + V F GN +P
Sbjct: 16 ARDNKDQRTSMITFAPPPSRTSLQPSGVRPGSDRPDRILLKLSKVFAFVDLGNSIP 71
>12_02_0030 +
12469707-12469902,12470337-12470658,12472208-12472245,
12472486-12473573
Length = 547
Score = 29.1 bits (62), Expect = 4.7
Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
Frame = +3
Query: 279 DTAPSPSRRRAFSPGRLPGTWRRRR--SLPIMRGVVTFATGGNHVPEKEQLERGGSNLGG 452
D A RR+ + GR G R S + G GG +L GG+ GG
Sbjct: 73 DEARPERRRQEGAGGRGAGVRRVEGGGSGAVGEGARAAVLGGAATIGARRLWAGGAARGG 132
Query: 453 LCWRRGLAAWRTRRPVSG--PSRRCARSSRNGR 545
RRG ++ RP +G RR A R+GR
Sbjct: 133 FGRRRGASSTHAWRPGAGRRKGRRRAARRRSGR 165
>09_02_0184 - 5485231-5485743
Length = 170
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +1
Query: 4 WITVPRSRIGRSLELPRSFREVGPPTDGDGWIAESALAKRRRA*HGGAPPLRGGG 168
W+ R RS +PR+ VG + G S+ +RR GGA RGGG
Sbjct: 18 WLQQRRRPRCRSPGVPRTAALVGAAAEAGGGRRRSSWPRRRLEADGGARRGRGGG 72
>08_02_0631 - 19509416-19509868
Length = 150
Score = 29.1 bits (62), Expect = 4.7
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Frame = +3
Query: 300 RRRAFSPGRLPGTWRRRRSLPIMRGVVTFATGGNHVPEKEQLERGGSNLGGLCWRRGL-- 473
R+ + GR GT R+ L GVV G V ++GG GG R GL
Sbjct: 54 RQGVLTDGREDGTGVARQRLS-WDGVVCGVRRGRQVGVAADSDKGGEERGGRGGRGGLRG 112
Query: 474 AAWRTRRPVSGPSRR 518
R RRP+ P +
Sbjct: 113 VGARLRRPLPRPGEQ 127
>08_01_0966 +
9751198-9751530,9752182-9752337,9753145-9753240,
9753599-9753719,9754027-9754196
Length = 291
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +3
Query: 471 LAAWRTRRPVSGPSRRCARSSRNGRTVTKGVSPSG*RKCLPAMGVSAG 614
LAA R+RRP++ P RC ++ T T G L G AG
Sbjct: 29 LAAPRSRRPINPPRLRCRAAAGAAATTTTTTGGGGGGGALVLEGSGAG 76
>08_01_0337 - 2994086-2995489
Length = 467
Score = 29.1 bits (62), Expect = 4.7
Identities = 30/78 (38%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Frame = -2
Query: 514 LDGPETGRRVRQAARPRLQHRPPRL-EPPRSNCSFSGTWFPPVAKVTTPRIIGSERLRLQ 338
LDGP G R R L R PRL P R CS PV P + LR +
Sbjct: 114 LDGPPAGPPPRVLRRATLCARCPRLPRPRRGRCSGDRDGALPVRDALPP---VAHVLR-R 169
Query: 337 VPGRRPGENARRLEGDGA 284
P RR GE R GD A
Sbjct: 170 PPRRRAGEGDR---GDAA 184
>06_03_1501 +
30612643-30613310,30613396-30613501,30613732-30613934,
30614211-30614502
Length = 422
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 503 RTVEAVRPVLAKWANRDQGRLTFRLTQMLTGHGCFGRYLHRVARREPT 646
+ VE + LA W + + G+ T TG C+G L + R++P+
Sbjct: 190 KNVEMLSEHLADWVSEEDGKKIVFHTFSNTGWLCYGVILENLQRQDPS 237
>05_05_0076 - 22222162-22222423,22222595-22222818
Length = 161
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -2
Query: 325 RPGENARRLEGDGAVSTNRPDCDC--TLRASQRHDVSASQGAAPHGGS 188
R G + L G G+V C+C RAS+R D S++ G GG+
Sbjct: 66 RAGAASTSLRG-GSVDVEAVGCNCEAVARASRRGDASSTVGTTAQGGA 112
>04_04_0440 - 25219961-25221529
Length = 522
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 728 GXAPPMRGNMRAYXRPCPRRSHSGDTPSSVPS 633
G APP G + P P R H+ D P + S
Sbjct: 15 GDAPPTAGGGARFAAPPPERDHTQDLPDEILS 46
>01_02_0092 +
11057604-11057717,11058998-11059531,11060036-11060101,
11060201-11060367,11060445-11060592,11060673-11060763,
11060850-11061199,11061284-11061388,11061490-11061789
Length = 624
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -2
Query: 553 VTVRPFREDRAHRLDGPETGRRVR-QAARPRLQHRPPRLEPPRSNCSFSGT 404
V+ R + D+ R P+ V+ AA P+L HRPP PP GT
Sbjct: 450 VSPRTLKTDQFLRTIAPQQRHEVQFLAAEPKLHHRPP--TPPLIGAEVHGT 498
>12_01_0909 -
8828921-8829004,8829204-8829249,8829798-8829919,
8830013-8830078,8830520-8830771,8830859-8830939,
8831193-8831294,8831373-8831410,8831497-8831602,
8831694-8831816,8831918-8831994,8833095-8833240,
8833355-8833533
Length = 473
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -1
Query: 761 TSPVLFXRQGHGXAPPMRGNMRAYXRPCPRRSHSGDTPSSVPSGQRDAGT 612
T P+ + HG A P+R +RA P + G PS VP + T
Sbjct: 325 TKPLAVRTRMHGRAWPLRAPVRAGRVPSWQEFARGSRPSGVPCMSDEVAT 374
>10_08_0973 -
21963754-21963936,21964089-21964383,21964504-21964616,
21964729-21964913,21965054-21965201,21965297-21965575,
21965657-21965761,21965936-21966178,21966426-21966486,
21966734-21966792
Length = 556
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 792 PSIVAXTVGXDKSGPIXETRTRGCSTHAGQ 703
P +V T+G K G + T+ CSTH Q
Sbjct: 425 PCMVLSTIGISKPGKLEGKSTKQCSTHLHQ 454
>06_03_0732 +
23965090-23965431,23965610-23965746,23967359-23967417,
23968817-23970135
Length = 618
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/70 (28%), Positives = 27/70 (38%)
Frame = -2
Query: 604 TPMAGKHLRQPEGETPLVTVRPFREDRAHRLDGPETGRRVRQAARPRLQHRPPRLEPPRS 425
+P+A H P L + E HR+ TG RV R Q +PP P +
Sbjct: 202 SPLAAAHGEPPSHGEILAADQSRAESIQHRVSTTTTG-RVNPKRRRHRQQQPPSAPAPAA 260
Query: 424 NCSFSGTWFP 395
+ S S P
Sbjct: 261 SLSSSTASLP 270
>04_04_0641 + 26896986-26897257,26897263-26897437
Length = 148
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = -2
Query: 382 VTTPRIIGSERLR---LQVPGRRPGENARRLEGDGAVSTNRPDCDC 254
V PR++ +E++R ++ R G++A RL D AVS D DC
Sbjct: 19 VRPPRLLENEQVREVEVEDDARGEGKSAGRLAKDRAVSEAEADDDC 64
>02_02_0131 -
7065762-7065813,7065907-7065992,7066080-7066150,
7066563-7066638,7066977-7067078,7068025-7068123,
7068208-7068339
Length = 205
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/82 (25%), Positives = 35/82 (42%)
Frame = +2
Query: 383 LRDRGEPRPGEGAIRARRLQSRRSVLEAWSRRLADPSAGLRTVEAVRPVLAKWANRDQGR 562
+R RGE G A RA R R+ L ++ ++V L+ + ++ R
Sbjct: 13 VRGRGEGEEGSLARRAWRQYLRQLQLHPLRTKMITAGCLAGVSDSVAQKLSGYQRIEKRR 72
Query: 563 LTFRLTQMLTGHGCFGRYLHRV 628
L ++ G FG +LH+V
Sbjct: 73 LLLKMLFGFAYGGPFGHFLHKV 94
>12_01_0182 + 1345209-1347065
Length = 618
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 315 RTHAASKETVRYPRIALTAIARCGRRSATT 226
+TH ASKE T + CGRRS+T+
Sbjct: 503 KTHPASKEIYTMVEEIETRLIECGRRSSTS 532
>11_06_0542 +
24777453-24777632,24777654-24778478,24778576-24779319,
24779422-24780354,24780456-24780938,24780969-24781082,
24781240-24781636,24781732-24782024,24782392-24782802
Length = 1459
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 493 RRVRQAARPRLQHRPPRLEPPRSNCSFSG 407
++V+Q L HRPP PPR++ SF G
Sbjct: 605 QKVKQQVLQGLHHRPPP-HPPRADRSFKG 632
>11_02_0137 - 8702661-8703495,8703820-8704628
Length = 547
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 198 CGAAP*LAETSWRCDARSVQSQSGRFVDT 284
CG+ L ETSW+ +V+ G ++DT
Sbjct: 171 CGSRNGLRETSWQLPKLNVEVDKGSYIDT 199
>09_02_0465 - 9594866-9595672,9596036-9597496
Length = 755
Score = 28.3 bits (60), Expect = 8.2
Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
Frame = -2
Query: 493 RRVRQAARPRLQHRPPRLEPPRSNCSFSGTWFPPV--------AKVTTPRIIGSERLRLQ 338
R +R AAR R HRPP S+ S SG P V A + R+ +ERL
Sbjct: 5 RHLRSAARQR-SHRPPPAAGDASSSSSSGRLEPEVIRSNKAITAHMRAGRVADAERLFAA 63
Query: 337 VPGRRPGENARRLEGDGA 284
+P R L G A
Sbjct: 64 MPRRSTSTYNAMLAGYSA 81
>06_01_0728 -
5356400-5356676,5356888-5357090,5357181-5357474,
5357940-5358063,5358157-5359496
Length = 745
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = -2
Query: 244 ASQRHDVSASQGAAPHGGSV*CNRPHHPHVEAAHHRVRPSDVWQEPTQRSSRRHQSGGQL 65
++ H A AA GGS + PH P V P +V ++ + R RR + +L
Sbjct: 113 STSSHASPAHPAAAAGGGSGAASTPHTPAEADDEEEVFPKEVRRKSSARCRRRMKLSVEL 172
Query: 64 L 62
L
Sbjct: 173 L 173
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 469 PRLQHRPPRLEPPRSNCSFSGTWFPPVAKVTTP 371
P LQ PP L P +CS T PP + T+P
Sbjct: 69 PPLQPTPPPLPPTTLSCSSHPTPPPPPSPTTSP 101
>04_04_0439 - 25207950-25209629
Length = 559
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 279 DTAPSPSRRRAFSPGRLPGTWRRRRSLPIMRGVVTFATGGNHVPEKEQLER 431
+T + + A PG LP R+LP++ GG+ +P +++ ER
Sbjct: 21 ETVDANLNKSAPPPGALPLWQALNRNLPLLTNGEAAGAGGDALPPRQERER 71
>04_03_0984 - 21432119-21432157,21432722-21434068
Length = 461
Score = 28.3 bits (60), Expect = 8.2
Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Frame = +1
Query: 31 GRSLELPRSFRE-VGPPTDGDGWIAESALAK--RRRA*HGGAPPLRGGGAVYCIIRSPRV 201
G +EL R V GD A +AL + RR + GG P + A Y +PR+
Sbjct: 81 GGGMELVRLLLSAVAAGEAGDARAAAAALREVDRRASCRGGGDPAQRVAACYAAALAPRL 140
Query: 202 VPRLDSQKRRGAATPAACNRSQ 267
L R A PAA Q
Sbjct: 141 AAGL-RPARSSPAAPAAARAEQ 161
>03_06_0311 +
33054022-33054118,33056109-33056353,33057058-33057398,
33057488-33057538,33057623-33057695,33058229-33058333,
33060124-33060206,33061209-33061249,33061659-33063120,
33063368-33064847,33064958-33065122,33065232-33065424,
33065502-33065613,33065702-33065849,33065951-33066148,
33066234-33066512,33066612-33066773,33066872-33067090,
33067481-33067612
Length = 1861
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 44 NFRAHFEKLAPRLMATAGSLSRLLPNVGG-PDTVVRRLYVGVVRSI 178
++R++FE + + +L +VGG P + L GVVRSI
Sbjct: 531 SYRSYFEHFSEKARVCVEVYKKLARSVGGNPQVDLEELIAGVVRSI 576
>01_06_0683 - 31173763-31174635,31175146-31175436
Length = 387
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 243 ARSVQSQSGRFVDTAPSPSRRRAFSPGRLPGTWRRR 350
A S+ Q G F+ AP P++ R+ PG W R
Sbjct: 153 AASMAVQPGGFLPEAPVPAKARSKRSRAAPGNWSSR 188
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 249 SVQSQSGRFVDTAPSPSRRRAFSPGRLPGTWRRRR 353
+V+ + R +PSPS RR+ S R P +RR R
Sbjct: 505 TVEEKDARGKSRSPSPSARRSKSRSRSPIKYRRSR 539
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,589,407
Number of Sequences: 37544
Number of extensions: 717277
Number of successful extensions: 3396
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 3101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3393
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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