Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_B18
(848 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22818| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.096
SB_9003| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_28494| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_27128| Best HMM Match : PADR1 (HMM E-Value=8.3) 33 0.29
SB_7615| Best HMM Match : RVT_1 (HMM E-Value=1e-33) 33 0.29
SB_53026| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_32202| Best HMM Match : RVT_1 (HMM E-Value=0.1) 33 0.29
SB_1851| Best HMM Match : RVT_1 (HMM E-Value=3.2e-16) 33 0.29
SB_20057| Best HMM Match : RVT_1 (HMM E-Value=3e-13) 33 0.39
SB_10516| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_56622| Best HMM Match : ImpA-rel_N (HMM E-Value=1) 32 0.51
SB_54193| Best HMM Match : REF (HMM E-Value=8.4) 32 0.51
SB_53385| Best HMM Match : DUF1388 (HMM E-Value=0.66) 32 0.51
SB_50918| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_42670| Best HMM Match : RVT_1 (HMM E-Value=5.6e-27) 32 0.51
SB_8667| Best HMM Match : SAP (HMM E-Value=2.3) 32 0.51
SB_6320| Best HMM Match : Exo_endo_phos (HMM E-Value=4.8) 32 0.51
SB_567| Best HMM Match : RVT_1 (HMM E-Value=8.3e-05) 32 0.51
SB_54846| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_37579| Best HMM Match : SAP (HMM E-Value=2.3) 32 0.51
SB_22859| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_16012| Best HMM Match : Glyco_hydro_20 (HMM E-Value=0) 32 0.51
SB_13145| Best HMM Match : Ribosomal_L30 (HMM E-Value=5.4) 32 0.51
SB_11746| Best HMM Match : RVT_1 (HMM E-Value=5e-31) 32 0.51
SB_534| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.68
SB_5816| Best HMM Match : RVT_1 (HMM E-Value=3e-16) 32 0.68
SB_51105| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.68
SB_26251| Best HMM Match : RVT_1 (HMM E-Value=0.0014) 32 0.68
SB_47406| Best HMM Match : RB_A (HMM E-Value=6.4) 31 0.89
SB_32784| Best HMM Match : RVT_1 (HMM E-Value=3.9e-26) 31 0.89
SB_30073| Best HMM Match : RVT_1 (HMM E-Value=3e-26) 31 0.89
SB_51268| Best HMM Match : SAP (HMM E-Value=2.3) 31 0.89
SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6) 31 1.2
SB_9324| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_19415| Best HMM Match : LON (HMM E-Value=4.4) 31 1.6
SB_41512| Best HMM Match : SAP (HMM E-Value=2.3) 31 1.6
SB_34517| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_32153| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_17280| Best HMM Match : Ribosomal_S15 (HMM E-Value=6.2) 30 2.1
SB_34652| Best HMM Match : Ank (HMM E-Value=3.8e-34) 30 2.7
SB_51468| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_23226| Best HMM Match : Herpes_UL43 (HMM E-Value=1.9) 29 3.6
SB_55435| Best HMM Match : RVT_1 (HMM E-Value=7.9e-22) 29 4.8
SB_50872| Best HMM Match : AraC_E_bind (HMM E-Value=7.5) 29 4.8
SB_40188| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 29 4.8
SB_30951| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_15450| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_10577| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_54734| Best HMM Match : RVT_1 (HMM E-Value=0.24) 29 4.8
SB_41518| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_40322| Best HMM Match : RVT_1 (HMM E-Value=7.4e-27) 29 4.8
SB_35035| Best HMM Match : Mic1 (HMM E-Value=5.3) 29 4.8
SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_29913| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_24096| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5) 29 4.8
SB_57582| Best HMM Match : efhand (HMM E-Value=3.8e-05) 25 5.5
SB_45328| Best HMM Match : DUF1162 (HMM E-Value=6.1e-09) 29 6.3
SB_32869| Best HMM Match : Toxin_7 (HMM E-Value=3.9) 29 6.3
SB_32854| Best HMM Match : DUF1388 (HMM E-Value=2.9e-23) 29 6.3
SB_21953| Best HMM Match : UME (HMM E-Value=6.1) 29 6.3
SB_17998| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_47521| Best HMM Match : RVT_1 (HMM E-Value=7.2e-24) 29 6.3
SB_27650| Best HMM Match : Binary_toxA (HMM E-Value=8.2) 29 6.3
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_23862| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_1554| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_22818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 34.7 bits (76), Expect = 0.096
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +2
Query: 17 LGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYGAP 196
LG+E+D + N+ H +K + G++ RL P V P + +Y +V+ Y +P
Sbjct: 91 LGIEIDDKLNWGNHIDKFCKKAGPGIGAIRRLKPFV--PRESLETMYKALVQPYFDYCSP 148
Query: 197 VW 202
+W
Sbjct: 149 LW 150
>SB_9003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 33.5 bits (73), Expect = 0.22
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +2
Query: 17 LGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYGAP 196
LGL+LD +F H EK+ ++ + L ++ + P +++Y +++ I YG+
Sbjct: 60 LGLDLDSELSFDGHVEKICKKVASRIAILRKIRSFL--PLAQRKQIYDALIQPIFNYGSA 117
Query: 197 VW 202
VW
Sbjct: 118 VW 119
>SB_28494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 33.1 bits (72), Expect = 0.29
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 14 YLGLEL--DGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALY 187
YLG+ L D RWNF+ + K+ + +T G + R L + + R YV +VRS Y
Sbjct: 318 YLGVLLSDDLRWNFQVN--KIVNKANSTLGFIKRNLYSCS--EVTKRVAYVTLVRSHLEY 373
Query: 188 GAPVW 202
A VW
Sbjct: 374 AAAVW 378
>SB_27128| Best HMM Match : PADR1 (HMM E-Value=8.3)
Length = 242
Score = 33.1 bits (72), Expect = 0.29
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 14 YLGLEL--DGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALY 187
YLG+ L D RWNF+ + K+ + +T G + R L + + R YV +VRS Y
Sbjct: 164 YLGVLLSDDLRWNFQVN--KIVNKANSTLGFIKRNLYSCS--EVTKRVAYVTLVRSHLEY 219
Query: 188 GAPVW 202
A VW
Sbjct: 220 AAAVW 224
>SB_7615| Best HMM Match : RVT_1 (HMM E-Value=1e-33)
Length = 363
Score = 33.1 bits (72), Expect = 0.29
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 14 YLGLEL--DGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALY 187
YLG+ L D RWNF+ + K+ + +T G + R L + + R YV +VRS Y
Sbjct: 285 YLGVLLSDDLRWNFQVN--KIVNKANSTLGFIKRNLYSCS--EVTKRVAYVTLVRSHLEY 340
Query: 188 GAPVW 202
A VW
Sbjct: 341 AAAVW 345
>SB_53026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 33.1 bits (72), Expect = 0.29
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 14 YLGLEL--DGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALY 187
YLG+ L D RWNF+ + K+ + +T G + R L + + R YV +VRS Y
Sbjct: 123 YLGVLLSDDLRWNFQVN--KIVNKANSTLGFIKRNLYSCS--EVTKRVAYVTLVRSHLEY 178
Query: 188 GAPVW 202
A VW
Sbjct: 179 AAAVW 183
>SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 33.1 bits (72), Expect = 0.29
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +2
Query: 8 LRYLGLEL--DGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRL-YVGVVRSI 178
++YLG+ + D RWN H + + G L R N+ DT + YVG+VRS+
Sbjct: 38 IKYLGVTITRDLRWN--RHVAETVSKANKILGLLRR---NLHFCDTKAKEAAYVGLVRSL 92
Query: 179 ALYGAPVWCRALTRRNVVALRRPQRAIA 262
Y + +W T + +V + + QR A
Sbjct: 93 LEYASAIW-DPHTSKLIVEIEKVQRRAA 119
>SB_32202| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 259
Score = 33.1 bits (72), Expect = 0.29
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 14 YLGLEL--DGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALY 187
YLG+ L D RWNF+ + K+ + +T G + R L + + R YV +VRS Y
Sbjct: 181 YLGVLLSDDLRWNFQVN--KIVNKANSTLGFIKRNLYSCS--EVTKRVAYVTLVRSHLEY 236
Query: 188 GAPVW 202
A VW
Sbjct: 237 AAAVW 241
>SB_1851| Best HMM Match : RVT_1 (HMM E-Value=3.2e-16)
Length = 287
Score = 33.1 bits (72), Expect = 0.29
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 14 YLGLEL--DGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALY 187
YLG+ L D RWNF+ + K+ + +T G + R L + + R YV +VRS Y
Sbjct: 209 YLGVLLSDDLRWNFQVN--KIVNKANSTLGFIKRNLYSCS--EVTKRVAYVTLVRSHLEY 264
Query: 188 GAPVW 202
A VW
Sbjct: 265 AAAVW 269
>SB_20057| Best HMM Match : RVT_1 (HMM E-Value=3e-13)
Length = 269
Score = 32.7 bits (71), Expect = 0.39
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 14 YLGLEL--DGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALY 187
YLG+ L D RWNF+ + K+ + +T G + R L + + R YV +VRS Y
Sbjct: 191 YLGVLLSDDLRWNFQVN--KIVNKANSTLGFIKRNLYSCS--EDTKRVAYVTLVRSHLEY 246
Query: 188 GAPVW 202
A VW
Sbjct: 247 AAAVW 251
>SB_10516| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 32.7 bits (71), Expect = 0.39
Identities = 21/82 (25%), Positives = 34/82 (41%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
R LG+ D + H E L ++ + L R+ P + + Y + S +LY
Sbjct: 181 RVLGVVFDNHLTWEPHVEHLCKKINSRISLLRRIAPFLTPAGAI--HYYNACIHSQSLYC 238
Query: 191 APVWCRALTRRNVVALRRPQRA 256
A VW ++ LR +RA
Sbjct: 239 ASVWGNCSQNLQLLLLRSQKRA 260
>SB_56622| Best HMM Match : ImpA-rel_N (HMM E-Value=1)
Length = 529
Score = 32.3 bits (70), Expect = 0.51
Identities = 25/103 (24%), Positives = 48/103 (46%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L R+L G + + +Y ++RS+ Y
Sbjct: 142 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 200
Query: 191 APVWCRALTRRNVVALRRPQRAIAVRAIRGYRTVSFEAACVLA 319
APVW +L + QR A+R I Y +S+E+ +A
Sbjct: 201 APVWA-SLPEYLAELIETVQRK-AIRII--YPCLSYESGLKVA 239
>SB_54193| Best HMM Match : REF (HMM E-Value=8.4)
Length = 172
Score = 32.3 bits (70), Expect = 0.51
Identities = 25/103 (24%), Positives = 48/103 (46%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L R+L G + + +Y ++RS+ Y
Sbjct: 40 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 98
Query: 191 APVWCRALTRRNVVALRRPQRAIAVRAIRGYRTVSFEAACVLA 319
APVW +L + QR A+R I Y +S+E+ +A
Sbjct: 99 APVWA-SLPEYLAELIETVQRK-AIRII--YPCLSYESGLKVA 137
>SB_53385| Best HMM Match : DUF1388 (HMM E-Value=0.66)
Length = 264
Score = 32.3 bits (70), Expect = 0.51
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = -2
Query: 649 HRRFPPGNAMQV--PAETPMAGKHLRQPEGETPLVTVRPFREDRAHRLDGPETGRRVRQA 476
HR P ++ P E + R E PL RP R P+ R ++
Sbjct: 60 HRPLEPHRPLEPHRPLEPHRPLEPHRPQEPHRPLEPHRPLEPPRPQEPHRPQEPPRPQEP 119
Query: 475 ARPRLQHRPPRLEPPR 428
RP+ HRP LEPPR
Sbjct: 120 HRPQEPHRP--LEPPR 133
Score = 32.3 bits (70), Expect = 0.51
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = -2
Query: 649 HRRFPPGNAMQVPA-ETPMAGKHLRQP-EGETPLVTVRPFREDRAHRLDGPETGRRVRQA 476
HR P ++ P + P + +P E P RP R P+ R +
Sbjct: 90 HRPLEPHRPLEPPRPQEPHRPQEPPRPQEPHRPQEPHRPLEPPRPQEQHRPQEPHRPLEP 149
Query: 475 ARPRLQHRPPRLEPPR 428
RP+ HRP LEPPR
Sbjct: 150 TRPQESHRP--LEPPR 163
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 8/83 (9%)
Frame = -2
Query: 649 HRRFPPGNAMQV--PAETPMAGKHLRQPEGETPLVTVRP------FREDRAHRLDGPETG 494
HR P + P E P + R E PL RP R P+
Sbjct: 144 HRPLEPTRPQESHRPLEPPRPQEQHRPLESHRPLEPTRPQESHRPLEPPRPQEPHRPQEP 203
Query: 493 RRVRQAARPRLQHRPPRLEPPRS 425
R + RP+ QHRP EPP++
Sbjct: 204 HRPLEPPRPQEQHRPQ--EPPKT 224
>SB_50918| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 32.3 bits (70), Expect = 0.51
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +2
Query: 8 LRYLGLEL--DGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRL-YVGVVRSI 178
++YLG+ + D RWN +A + L L N+ DT + YVG+VR +
Sbjct: 746 IKYLGVTITRDLRWN-----RHVAETVSKANKILGLLWQNLHFCDTKAKEAAYVGLVRPL 800
Query: 179 ALYGAPVWCRALTRRNVVALRRPQRAIA 262
Y + +W + TR+ +V + + QR A
Sbjct: 801 LEYASAIWDQH-TRKLIVEIEKVQRRAA 827
>SB_42670| Best HMM Match : RVT_1 (HMM E-Value=5.6e-27)
Length = 591
Score = 32.3 bits (70), Expect = 0.51
Identities = 25/103 (24%), Positives = 48/103 (46%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L R+L G + + +Y ++RS+ Y
Sbjct: 426 KILGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 484
Query: 191 APVWCRALTRRNVVALRRPQRAIAVRAIRGYRTVSFEAACVLA 319
APVW +L + QR A+R I Y +S+E+ +A
Sbjct: 485 APVWA-SLPEYLAELIETVQRK-AIRII--YPCLSYESGLKVA 523
>SB_8667| Best HMM Match : SAP (HMM E-Value=2.3)
Length = 439
Score = 32.3 bits (70), Expect = 0.51
Identities = 25/103 (24%), Positives = 48/103 (46%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L R+L G + + +Y ++RS+ Y
Sbjct: 122 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 180
Query: 191 APVWCRALTRRNVVALRRPQRAIAVRAIRGYRTVSFEAACVLA 319
APVW +L + QR A+R I Y +S+E+ +A
Sbjct: 181 APVWA-SLPEYLAELIETVQRK-AIRII--YPCLSYESGLKVA 219
>SB_6320| Best HMM Match : Exo_endo_phos (HMM E-Value=4.8)
Length = 845
Score = 32.3 bits (70), Expect = 0.51
Identities = 25/103 (24%), Positives = 48/103 (46%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L R+L G + + +Y ++RS+ Y
Sbjct: 657 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 715
Query: 191 APVWCRALTRRNVVALRRPQRAIAVRAIRGYRTVSFEAACVLA 319
APVW +L + QR A+R I Y +S+E+ +A
Sbjct: 716 APVWA-SLPEYLAELIETVQRK-AIRII--YPCLSYESGLKVA 754
>SB_567| Best HMM Match : RVT_1 (HMM E-Value=8.3e-05)
Length = 371
Score = 32.3 bits (70), Expect = 0.51
Identities = 25/103 (24%), Positives = 48/103 (46%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L R+L G + + +Y ++RS+ Y
Sbjct: 206 KILGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 264
Query: 191 APVWCRALTRRNVVALRRPQRAIAVRAIRGYRTVSFEAACVLA 319
APVW +L + QR A+R I Y +S+E+ +A
Sbjct: 265 APVWA-SLPEYLAELIETVQRK-AIRII--YPCLSYESGLKVA 303
>SB_54846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 32.3 bits (70), Expect = 0.51
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +2
Query: 8 LRYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALY 187
++YLG+ +D F+ H E + ++ T G +++L V P + +Y ++ Y
Sbjct: 93 VKYLGVLIDKNLTFKYHIEHITTKISRTVGLIAKLRHFV--PTKTLLHIYQSLILPHISY 150
Query: 188 GAPVWCRA 211
VW A
Sbjct: 151 VVTVWGHA 158
>SB_37579| Best HMM Match : SAP (HMM E-Value=2.3)
Length = 287
Score = 32.3 bits (70), Expect = 0.51
Identities = 25/103 (24%), Positives = 48/103 (46%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L R+L G + + +Y ++RS+ Y
Sbjct: 122 KLLGVHISADLSWNVHVDHIVKKASKRLFAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 180
Query: 191 APVWCRALTRRNVVALRRPQRAIAVRAIRGYRTVSFEAACVLA 319
APVW +L + QR A+R I Y +S+E+ +A
Sbjct: 181 APVWA-SLPEYLAELIETVQRK-AIRII--YPCLSYESGLKVA 219
>SB_22859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1108
Score = 32.3 bits (70), Expect = 0.51
Identities = 25/103 (24%), Positives = 48/103 (46%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L R+L G + + +Y ++RS+ Y
Sbjct: 685 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 743
Query: 191 APVWCRALTRRNVVALRRPQRAIAVRAIRGYRTVSFEAACVLA 319
APVW +L + QR A+R I Y +S+E+ +A
Sbjct: 744 APVWA-SLPEYLAELIETVQRK-AIRII--YPCLSYESGLKVA 782
>SB_16012| Best HMM Match : Glyco_hydro_20 (HMM E-Value=0)
Length = 1788
Score = 32.3 bits (70), Expect = 0.51
Identities = 25/103 (24%), Positives = 48/103 (46%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L R+L G + + +Y ++RS+ Y
Sbjct: 350 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 408
Query: 191 APVWCRALTRRNVVALRRPQRAIAVRAIRGYRTVSFEAACVLA 319
APVW +L + QR A+R I Y +S+E+ +A
Sbjct: 409 APVWA-SLPEYLAELIETVQRK-AIRII--YPCLSYESGLKVA 447
>SB_13145| Best HMM Match : Ribosomal_L30 (HMM E-Value=5.4)
Length = 199
Score = 32.3 bits (70), Expect = 0.51
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Frame = +2
Query: 8 LRYLGLEL--DGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRL-YVGVVRSI 178
++YLG+ + D RWN H + + G L R N+ DT + YVG+VR +
Sbjct: 29 IKYLGVTITRDVRWN--RHVAETVSKANKILGLLRR---NLHFCDTKAKEAAYVGLVRPL 83
Query: 179 ALYGAPVWCRALTRRNVVALRRPQRAIAVRAIRGYRTVSFE 301
Y + +W T + +V + QR A R + SFE
Sbjct: 84 LEYASAIW-DPHTSKLIVEIEEVQRR-AARFVTADYNFSFE 122
>SB_11746| Best HMM Match : RVT_1 (HMM E-Value=5e-31)
Length = 323
Score = 32.3 bits (70), Expect = 0.51
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +2
Query: 8 LRYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALY 187
++YLG+ +D F+ H E + ++ T G +++L V P + +Y ++ Y
Sbjct: 257 VKYLGVLIDKNLTFKYHIEHITTKISRTVGLIAKLRHFV--PTKTLLHIYQSLILPHISY 314
Query: 188 GAPVWCRA 211
VW A
Sbjct: 315 VVTVWGHA 322
>SB_534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 948
Score = 32.3 bits (70), Expect = 0.51
Identities = 25/103 (24%), Positives = 48/103 (46%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L R+L G + + +Y ++RS+ Y
Sbjct: 331 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 389
Query: 191 APVWCRALTRRNVVALRRPQRAIAVRAIRGYRTVSFEAACVLA 319
APVW +L + QR A+R I Y +S+E+ +A
Sbjct: 390 APVWA-SLPEYLAELIETVQRK-AIRII--YPCLSYESGLKVA 428
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 31.9 bits (69), Expect = 0.68
Identities = 26/82 (31%), Positives = 32/82 (39%)
Frame = -2
Query: 511 DGPETGRRVRQAARPRLQHRPPRLEPPRSNCSFSGTWFPPVAKVTTPRIIGSERLRLQVP 332
DG T RR R A+P L P + P S PP AKV ++ S P
Sbjct: 38 DGGNTNRRTRIQAKPALNLPSPPSKTPSS--------VPPQAKVDETPVLPSPPTNTPRP 89
Query: 331 GRRPGENARRLEGDGAVSTNRP 266
R P RRL+ +T P
Sbjct: 90 SRIPRLKRRRLQTPTRTTTLPP 111
>SB_5816| Best HMM Match : RVT_1 (HMM E-Value=3e-16)
Length = 904
Score = 31.9 bits (69), Expect = 0.68
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +2
Query: 17 LGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYGAP 196
LGL+LD +F H EK+ ++ + L ++ + P ++ Y +++ I YG+
Sbjct: 594 LGLDLDSELSFDGHGEKICKKVASRIAILRKIRSFL--PLAQRKQFYDALIQPIFNYGSA 651
Query: 197 VW 202
VW
Sbjct: 652 VW 653
>SB_51105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1280
Score = 31.9 bits (69), Expect = 0.68
Identities = 23/67 (34%), Positives = 28/67 (41%)
Frame = +1
Query: 79 TDGDGWIAESALAKRRRA*HGGAPPLRGGGAVYCIIRSPRVVPRLDSQKRRGAATPAACN 258
T D W S LA R H G P A YCI+ SP +VP + + R A+T A
Sbjct: 4 TINDVWAMFSLLAGGTRCYHRGKPSPFDDRAAYCIL-SP-MVPGGERKNGRSASTEMAAT 61
Query: 259 RSQGDSW 279
W
Sbjct: 62 HRAPKQW 68
>SB_26251| Best HMM Match : RVT_1 (HMM E-Value=0.0014)
Length = 391
Score = 31.9 bits (69), Expect = 0.68
Identities = 25/103 (24%), Positives = 48/103 (46%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L R+L G + + +Y ++RS+ Y
Sbjct: 270 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGIQQSDMVLIYCSLIRSVLEYA 328
Query: 191 APVWCRALTRRNVVALRRPQRAIAVRAIRGYRTVSFEAACVLA 319
APVW +L + QR A+R I Y +S+E+ +A
Sbjct: 329 APVWA-SLPEYLAELIETVQRK-AIRII--YPCLSYESGLKVA 367
>SB_47406| Best HMM Match : RB_A (HMM E-Value=6.4)
Length = 289
Score = 31.5 bits (68), Expect = 0.89
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 71 APRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYGAPVW 202
+PR+ + SL R+L G + R+Y ++RS+ Y +PVW
Sbjct: 164 SPRVKRSLYSL-RVLKKAGVHQADLVRIYCSIIRSVMEYASPVW 206
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 107 RLLPNVGGPDTVVRRLYVGVVRSIALYGAPVW 202
R+L G + R+Y ++RS+ Y +PVW
Sbjct: 20 RVLKKAGVHQADLVRIYCSIIRSVMEYASPVW 51
>SB_32784| Best HMM Match : RVT_1 (HMM E-Value=3.9e-26)
Length = 759
Score = 31.5 bits (68), Expect = 0.89
Identities = 24/103 (23%), Positives = 47/103 (45%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L R+L G + + +Y ++RS+ Y
Sbjct: 408 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 466
Query: 191 APVWCRALTRRNVVALRRPQRAIAVRAIRGYRTVSFEAACVLA 319
APVW A + L + A+R I Y +S+E+ +A
Sbjct: 467 APVW--ASLPEYLAELIETVKRKAIRII--YPCLSYESGLKVA 505
>SB_30073| Best HMM Match : RVT_1 (HMM E-Value=3e-26)
Length = 416
Score = 31.5 bits (68), Expect = 0.89
Identities = 24/98 (24%), Positives = 46/98 (46%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L R+L G + + +Y ++RS+ Y
Sbjct: 321 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 379
Query: 191 APVWCRALTRRNVVALRRPQRAIAVRAIRGYRTVSFEA 304
APVW +L + QR A+R I Y +S+E+
Sbjct: 380 APVWA-SLPEYLAELIETVQRK-AIRII--YPCLSYES 413
>SB_51268| Best HMM Match : SAP (HMM E-Value=2.3)
Length = 204
Score = 31.5 bits (68), Expect = 0.89
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + L + +L R+L G + + +Y ++RS+ Y
Sbjct: 84 KLLGVHISADLSWNVHVDHLVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 142
Query: 191 APVW 202
APVW
Sbjct: 143 APVW 146
>SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6)
Length = 231
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +2
Query: 8 LRYLGLEL--DGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRL-YVGVVRSI 178
++YLG+ + D RWN H + + G L R N+ DT + YVG+VR +
Sbjct: 38 IKYLGVTITRDLRWN--RHVAETVSKANKILGLLRR---NLHFCDTKAKEAAYVGLVRPL 92
Query: 179 ALYGAPVWCRALTRRNVVALRRPQRAIA 262
Y + +W T + +V + + QR A
Sbjct: 93 LEYASAIW-DPHTSKLIVEIEKVQRRAA 119
>SB_9324| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +2
Query: 2 TGLRYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIA 181
T +R LG+++ ++ H + + G L R N G P + + LYV +VRS
Sbjct: 41 TSVRDLGVQVSQDLSWGEHTHNVISKANKMLGFLLRHCSN-GLPLDLQKTLYVSLVRSHL 99
Query: 182 LYGAPVW 202
Y + VW
Sbjct: 100 TYASQVW 106
>SB_19415| Best HMM Match : LON (HMM E-Value=4.4)
Length = 360
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 17 LGLELDGRWNFRAHFEKLAPRLMATAGSLSRL-LPNVGGPDTVVRRLYVGVVRSIALYGA 193
LG+ L H E + + +L L +P V D V R+Y ++RS+ Y A
Sbjct: 197 LGVHLSRDLMRNVHVEYVIKKASKRLYALRSLKIPGVQSNDLV--RIYYALIRSVLEYAA 254
Query: 194 PVW 202
PVW
Sbjct: 255 PVW 257
>SB_41512| Best HMM Match : SAP (HMM E-Value=2.3)
Length = 249
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L R+L G + + +Y ++RS+ Y
Sbjct: 84 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 142
Query: 191 APVW 202
APVW
Sbjct: 143 APVW 146
>SB_34517| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/103 (24%), Positives = 48/103 (46%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L R+L G + + +Y ++RS+ Y
Sbjct: 198 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCLLIRSVLEYA 256
Query: 191 APVWCRALTRRNVVALRRPQRAIAVRAIRGYRTVSFEAACVLA 319
APVW +L + QR A+R I Y +S+E+ +A
Sbjct: 257 APVWA-SLPEYLAELIETVQRK-AIRII--YPCLSYESGLKVA 295
>SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1468
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Frame = -2
Query: 448 PRLEPPRSN----CSFSGTWFPPVAKVTTPR 368
P L+P +N C +G WFPP +++TT R
Sbjct: 130 PELDPTPTNIPKGCYHNGKWFPPGSRMTTER 160
>SB_32153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 505 PETGRRVRQAARPRLQHRPPRLEPPRSNCSFSGTWF 398
P+ G++ RQ +LQ P+L P R NC+ S T F
Sbjct: 13 PQIGKK-RQEISYKLQTIEPKLVPTRGNCNVSSTAF 47
>SB_17280| Best HMM Match : Ribosomal_S15 (HMM E-Value=6.2)
Length = 315
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ L + H E + + +L R L G + R+Y ++RS+ Y
Sbjct: 149 KILGVHLSSDLTWSVHVEYVIKKASKWLYAL-RSLKKFGVQSNDLVRIYCVLIRSVLEYA 207
Query: 191 APVW 202
APVW
Sbjct: 208 APVW 211
>SB_34652| Best HMM Match : Ank (HMM E-Value=3.8e-34)
Length = 1330
Score = 29.9 bits (64), Expect = 2.7
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +2
Query: 8 LRYLGLEL--DGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRL-YVGVVRSI 178
++YLG+++ D RWN H + + G L R N+ DT + YVG VR +
Sbjct: 1053 IKYLGVKITTDLRWN--RHVAETVSKANKILGLLRR---NLHFCDTKAKEAAYVGHVRPL 1107
Query: 179 ALYGAPVWCRALTRRNVVALRRPQRAIA 262
Y + +W T + ++ + + QR A
Sbjct: 1108 LEYASAIW-DPHTSKLIIEIEKVQRRAA 1134
>SB_51468| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1626
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = -2
Query: 487 VRQAARPRLQHRPPRLEPPRSNCSFSGTWFPPVAKVTTPRIIGSERLRLQVP 332
++ A + Q P L + C+ + T P V+ VT+P ++ +Q+P
Sbjct: 497 LQHAVTSQAQKNPSSLVSANAGCTSNSTTQPAVSAVTSPASQAQGKMNMQIP 548
>SB_23226| Best HMM Match : Herpes_UL43 (HMM E-Value=1.9)
Length = 749
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = -2
Query: 487 VRQAARPRLQHRPPRLEPPRSNCSFSGTWFPPVAKVTTPRIIGSERLRLQVP 332
++ A + Q P L + C+ + T P V+ VT+P ++ +Q+P
Sbjct: 477 LQHAVTSQAQKNPSSLVSANAGCTSNSTTQPAVSAVTSPASQAQGKMNMQIP 528
>SB_55435| Best HMM Match : RVT_1 (HMM E-Value=7.9e-22)
Length = 726
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPD-TVVRRLYVGVVRSIALY 187
+YLGL NF E+L + L + L D + +L+ +++ I LY
Sbjct: 637 KYLGLVFSAVGNFNLAKEELKKTALKALFKLRKDLGIHFRSDINLTLKLFDALIKPILLY 696
Query: 188 GAPVWCRALTRRNVVALRRPQRAIAVRAIRGY 283
G+ VW ++ V R P ++ + +++ Y
Sbjct: 697 GSEVW--GADNKSCVDDRDPLESVHLNSVKCY 726
>SB_50872| Best HMM Match : AraC_E_bind (HMM E-Value=7.5)
Length = 206
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L RLL G P + +Y ++RS+ Y
Sbjct: 40 KILGVHISSDLSWNKHVDYVVKKANKRLYAL-RLLKKSGVPVQDLVAIYCVLIRSVVEYA 98
Query: 191 APVW 202
PVW
Sbjct: 99 GPVW 102
>SB_40188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L RLL G P + +Y ++RS+ Y
Sbjct: 66 KILGVHISSDLSWNKHVDYVVKKANKRLYAL-RLLKKSGVPVQDLIAIYCVLIRSVGEYA 124
Query: 191 APVW 202
PVW
Sbjct: 125 GPVW 128
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +2
Query: 17 LGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYGAP 196
LGL+LD +F H EK+ ++ + L ++ + P ++ Y +++ I G+
Sbjct: 2326 LGLDLDSELSFDGHVEKICKKVASRIAILRKIRSFL--PLAQRKQFYNALIQPIFNCGSA 2383
Query: 197 VW 202
VW
Sbjct: 2384 VW 2385
>SB_30951| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L RLL G P + +Y ++RS+ Y
Sbjct: 40 KILGVHISSDLSWNKHVDYVVKKANKRLYAL-RLLKKSGVPVQDLIAIYCVLIRSVVEYA 98
Query: 191 APVW 202
PVW
Sbjct: 99 GPVW 102
>SB_15450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L RLL G P + +Y ++RS+ Y
Sbjct: 40 KILGVHISSDLSWNKHVDYVVKKANKRLYAL-RLLKKSGVPVQDLVAIYCVLIRSVVEYA 98
Query: 191 APVW 202
PVW
Sbjct: 99 GPVW 102
>SB_10577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L RLL G P + +Y ++RS+ Y
Sbjct: 12 KILGVHISSDLSWNKHVDYVVKKANKRLYAL-RLLKKSGVPVQDLIAIYCVLIRSVVEYA 70
Query: 191 APVW 202
PVW
Sbjct: 71 GPVW 74
>SB_54734| Best HMM Match : RVT_1 (HMM E-Value=0.24)
Length = 299
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L RLL G P + +Y ++RS+ Y
Sbjct: 174 KILGVHISSDLSWNKHVDYVVKKANKRLYAL-RLLKKSGVPVQDLIAIYCVLIRSVVEYA 232
Query: 191 APVW 202
PVW
Sbjct: 233 GPVW 236
>SB_41518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L RLL G P + +Y ++RS+ Y
Sbjct: 85 KILGVHISSDLSWNKHVDYVVKKANKRLYAL-RLLKKSGVPVQDLIAIYCVLIRSVVEYA 143
Query: 191 APVW 202
PVW
Sbjct: 144 GPVW 147
>SB_40322| Best HMM Match : RVT_1 (HMM E-Value=7.4e-27)
Length = 710
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L RLL G P + +Y ++RS+ Y
Sbjct: 597 KILGVHISSDLSWNKHVDYVVKKANKRLYAL-RLLKKSGVPVQDLVAIYCVLIRSVVEYA 655
Query: 191 APVW 202
PVW
Sbjct: 656 GPVW 659
>SB_35035| Best HMM Match : Mic1 (HMM E-Value=5.3)
Length = 235
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYG 190
+ LG+ + ++ H + + + +L RLL G P + +Y ++RS+ Y
Sbjct: 69 KILGVHISSDLSWNKHVDYVVKKANKRLYAL-RLLKKSGVPVQDLIAIYCVLIRSVVEYA 127
Query: 191 APVW 202
PVW
Sbjct: 128 GPVW 131
>SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 583 NAYRPWVFRPVPASRCPEGTDDGVSPL*LRRGH 681
N + PW+ V + RCP TDD + P + RG+
Sbjct: 535 NVHFPWMHH-VASPRCPRRTDDPLLPHTMHRGN 566
>SB_29913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +3
Query: 87 RRLDR*VGSCQTSEGLTRWCAASTWGWCGL--LHYTEPPCGAAP*LAETSWRCDARSVQS 260
+ + R V + G RW +A W + L H + CG + + E+ WR + V++
Sbjct: 40 KEIKRDVPGRRNINGEVRWFSARVWKFHALPARHGSAMQCGTSKGIQESFWRREVEKVRT 99
Query: 261 QSGRFV 278
+ V
Sbjct: 100 KEASLV 105
>SB_24096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -2
Query: 334 PGRRPGENARRLEGDGAVSTNRPDCDCTLRASQRHDVSASQGAAP-HGGSV*CNRPHHPH 158
PG R G + EGD A +TNR +++ + +V A + P +V P H
Sbjct: 43 PGSRAGHTGKGNEGDLAATTNRDSGKHPGKSTGKKEVHAMRFTHPGEYDNVEIGLPQSRH 102
Query: 157 VEAAHHRVRPSDVWQEPT 104
A++HR + ++ ++ T
Sbjct: 103 -HASNHRAKRGNMSRDNT 119
>SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5)
Length = 435
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = -2
Query: 580 RQPEGETPLVTVRPFREDRAHRLDGPETGRRVRQAARPRLQHRPPRLEPP 431
R + P RP + R + P R QA+RPR + RP + P
Sbjct: 225 RPSQAARPRQAARPRQASRPRQAARPRQRERTGQASRPRQRERPGQAARP 274
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 544 RPFREDRAHRLDGPETGRRVRQAARPRLQHRPPRLEPPR 428
RP + R + P R RQAARPR + R + PR
Sbjct: 225 RPSQAARPRQAARPRQASRPRQAARPRQRERTGQASRPR 263
>SB_57582| Best HMM Match : efhand (HMM E-Value=3.8e-05)
Length = 520
Score = 25.0 bits (52), Expect(2) = 5.5
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = -2
Query: 652 LHRRFPPGNAMQVPAETPMAGKHLRQPEGETPLVTVR-PFREDRAHRLDGPETGRRVRQA 476
L R +A + P E +AG + E ET + + P R R P++ R
Sbjct: 250 LEERNERKSAGKGPPERKIAGLQSVKEEPETTQSSEQLPKRPSSPQR---PKSPNRPASP 306
Query: 475 ARPRLQHRPPRLEPPRS 425
RPR +RP + PRS
Sbjct: 307 QRPRSPNRPSSPQRPRS 323
Score = 22.2 bits (45), Expect(2) = 5.5
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -2
Query: 328 RRPGENARRLEGDGAVSTNRPDCDCTLRASQRHDVSASQ 212
R P A + ++ +RPD ASQ VS S+
Sbjct: 322 RSPNRPASTSQSPSSIMLDRPDSSPARPASQMSGVSLSR 360
>SB_45328| Best HMM Match : DUF1162 (HMM E-Value=6.1e-09)
Length = 1508
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 616 PASRCPEGTDDGVSPL*LRRGHGRXYAR 699
PA+ EG++D V LRRG GR Y R
Sbjct: 810 PATPMEEGSEDQVDGGLLRRGRGRRYKR 837
>SB_32869| Best HMM Match : Toxin_7 (HMM E-Value=3.9)
Length = 910
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDT-VVRRLYVGVVRSIALY 187
+YLGL L NF ++L + L + L + D + +L+ ++ I LY
Sbjct: 135 KYLGLHLSAFGNFALAKQELKKTALKALYKLRKQLGDCFRADPKLTMKLFDTLIAPILLY 194
Query: 188 GAPVW 202
G+ VW
Sbjct: 195 GSEVW 199
>SB_32854| Best HMM Match : DUF1388 (HMM E-Value=2.9e-23)
Length = 171
Score = 28.7 bits (61), Expect = 6.3
Identities = 32/129 (24%), Positives = 46/129 (35%)
Frame = -2
Query: 652 LHRRFPPGNAMQVPAETPMAGKHLRQPEGETPLVTVRPFREDRAHRLDGPETGRRVRQAA 473
L + P N + + P++ K R + PL RP R P R
Sbjct: 34 LSNKRPLSNKRPLSNKRPLSNK--RPLSNKRPLSNKRPLSNKRPLSNKRPLANERPLSNK 91
Query: 472 RPRLQHRPPRLEPPRSNCSFSGTWFPPVAKVTTPRIIGSERLRLQVPGRRPGENARRLEG 293
RP RP E P +N P ++ R + +ER + +RP N R L
Sbjct: 92 RPLANERPLSNERPLANKRPLANKRP----LSNKRPLANER---PLSNKRPLSNKRPLSN 144
Query: 292 DGAVSTNRP 266
+S RP
Sbjct: 145 KRPLSNKRP 153
>SB_21953| Best HMM Match : UME (HMM E-Value=6.1)
Length = 304
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 11 RYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDT-VVRRLYVGVVRSIALY 187
+YLGL L NF ++L + L + L + D + +L+ ++ I LY
Sbjct: 135 KYLGLHLSAFGNFALAKQELKKTALKALYKLRKQLGDCFRADPKLTMKLFDTLIAPILLY 194
Query: 188 GAPVW 202
G+ VW
Sbjct: 195 GSEVW 199
>SB_17998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1089
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 92 PSPSVGGPTSRNERGSSNDRPIRDRGTV 9
P P+ G +SR + GS+ PIR T+
Sbjct: 900 PIPNTGSESSRGDSGSTRTSPIRSTSTI 927
>SB_47521| Best HMM Match : RVT_1 (HMM E-Value=7.2e-24)
Length = 338
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 2 TGLRYLGLELDGRWNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVV-RRLYVGVVRSI 178
T +YLGL NF A L + L R + N + ++ RL+ +++ I
Sbjct: 216 TTYKYLGLTFSSIGNFNAAKSDLKRVALKALFKLKREMGNNFRTNVLLTNRLFDCLIKPI 275
Query: 179 ALYGAPVW 202
LYG+ +W
Sbjct: 276 FLYGSGIW 283
>SB_27650| Best HMM Match : Binary_toxA (HMM E-Value=8.2)
Length = 159
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -1
Query: 779 PXQSAXTSPVLFXRQGHGXAPPMRGNMRAYXRPCPRRSHSGDT 651
P T+ +++ + HG APP R N+ RP + S T
Sbjct: 10 PSAQTLTTKLIYKKHKHGSAPPTRRNIGQKKRPGQSDTRSDKT 52
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = -2
Query: 736 KDTGXLHPCGAICERMXDRVLVAVTVVTLHRRFPPGNAMQVPAETPMAGKHLRQPEGET 560
K+TG L E M D L + T RF P + M P E +++ + ET
Sbjct: 2607 KETGPLPDIEEALEMMGDTDLTDLPTDTSKSRFTPQSTMLEPTEAKQTQSNVKNTKQET 2665
>SB_23862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3112
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 114 CQTSEGLTRWCAASTWGWCGLLHYTEP 194
C S+ LTR+ W WC +L+ P
Sbjct: 522 CYVSKNLTRYVCGPGWKWCQILNKCIP 548
>SB_1554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 28.3 bits (60), Expect = 8.3
Identities = 24/88 (27%), Positives = 41/88 (46%)
Frame = +2
Query: 41 WNFRAHFEKLAPRLMATAGSLSRLLPNVGGPDTVVRRLYVGVVRSIALYGAPVWCRALTR 220
WN H + + + +L R+L G + + +Y ++RS+ Y APVW +L
Sbjct: 20 WN--VHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYAAPVWA-SLPE 75
Query: 221 RNVVALRRPQRAIAVRAIRGYRTVSFEA 304
+ QR A+R I Y +S+E+
Sbjct: 76 YLAELIETVQRK-AIRII--YPCLSYES 100
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,529,664
Number of Sequences: 59808
Number of extensions: 657591
Number of successful extensions: 2521
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 2226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2504
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2407378809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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