BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP02_FL5_B18 (848 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembr... 33 1.7 AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembr... 33 1.7 AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembr... 33 1.7 AL122064-1|CAB59243.1| 294|Homo sapiens hypothetical protein pr... 33 1.7 AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein. 33 1.7 AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isof... 33 1.7 AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isof... 33 1.7 AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein. 33 1.7 AE006465-2|AAK61256.1| 1184|Homo sapiens some homology with holl... 33 1.7 AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein. 33 1.7 AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein. 33 1.7 BC095466-1|AAH95466.1| 235|Homo sapiens SAT2 protein protein. 32 2.3 AF442769-1|AAL35361.1| 368|Homo sapiens achaete-scute associate... 32 2.3 BC080195-1|AAH80195.1| 881|Homo sapiens Rho GTPase activating p... 31 4.0 AL833975-1|CAD38819.1| 414|Homo sapiens hypothetical protein pr... 31 4.0 AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens ... 31 4.0 AK125358-1|BAC86144.1| 608|Homo sapiens protein ( Homo sapiens ... 31 4.0 AK123791-1|BAC85692.1| 138|Homo sapiens protein ( Homo sapiens ... 31 4.0 AK027567-1|BAB55203.1| 803|Homo sapiens protein ( Homo sapiens ... 31 4.0 AK023281-1|BAB14506.1| 726|Homo sapiens protein ( Homo sapiens ... 31 4.0 AJ306731-1|CAC37948.1| 803|Homo sapiens RhoGAP protein protein. 31 4.0 AK026800-1|BAB15557.1| 232|Homo sapiens protein ( Homo sapiens ... 31 5.3 >AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C protein. Length = 962 Score = 32.7 bits (71), Expect = 1.7 Identities = 40/128 (31%), Positives = 46/128 (35%), Gaps = 9/128 (7%) Frame = -2 Query: 652 LHRRFPPGNAMQVPAETPMAGKHLRQPEGETPLV---TVRPFREDRAHRLDGPETGRRVR 482 LH PP + PA P+ + L PE L+ + RP RLD P GR Sbjct: 806 LHGPQPPRKGAEPPA--PLTSRAL-PPEPAPALLGGPSPRPHECASPLRLDVPPEGRCAS 862 Query: 481 QAARPRLQHRPPRLEPPRS-NCSFSGTWFPPVAKVTTP-----RIIGSERLRLQVPGRRP 320 ARP L PRL FSG PP P R G L GR Sbjct: 863 APARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKHLLYLGRPE 922 Query: 319 GENARRLE 296 G R L+ Sbjct: 923 GYRGRALK 930 >AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C protein. Length = 930 Score = 32.7 bits (71), Expect = 1.7 Identities = 40/128 (31%), Positives = 46/128 (35%), Gaps = 9/128 (7%) Frame = -2 Query: 652 LHRRFPPGNAMQVPAETPMAGKHLRQPEGETPLV---TVRPFREDRAHRLDGPETGRRVR 482 LH PP + PA P+ + L PE L+ + RP RLD P GR Sbjct: 774 LHGPQPPRKGAEPPA--PLTSRAL-PPEPAPALLGGPSPRPHECASPLRLDVPPEGRCAS 830 Query: 481 QAARPRLQHRPPRLEPPRS-NCSFSGTWFPPVAKVTTP-----RIIGSERLRLQVPGRRP 320 ARP L PRL FSG PP P R G L GR Sbjct: 831 APARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKHLLYLGRPE 890 Query: 319 GENARRLE 296 G R L+ Sbjct: 891 GYRGRALK 898 >AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C protein. Length = 922 Score = 32.7 bits (71), Expect = 1.7 Identities = 40/128 (31%), Positives = 46/128 (35%), Gaps = 9/128 (7%) Frame = -2 Query: 652 LHRRFPPGNAMQVPAETPMAGKHLRQPEGETPLV---TVRPFREDRAHRLDGPETGRRVR 482 LH PP + PA P+ + L PE L+ + RP RLD P GR Sbjct: 766 LHGPQPPRKGAEPPA--PLTSRAL-PPEPAPALLGGPSPRPHECASPLRLDVPPEGRCAS 822 Query: 481 QAARPRLQHRPPRLEPPRS-NCSFSGTWFPPVAKVTTP-----RIIGSERLRLQVPGRRP 320 ARP L PRL FSG PP P R G L GR Sbjct: 823 APARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKHLLYLGRPE 882 Query: 319 GENARRLE 296 G R L+ Sbjct: 883 GYRGRALK 890 >AL122064-1|CAB59243.1| 294|Homo sapiens hypothetical protein protein. Length = 294 Score = 32.7 bits (71), Expect = 1.7 Identities = 40/128 (31%), Positives = 46/128 (35%), Gaps = 9/128 (7%) Frame = -2 Query: 652 LHRRFPPGNAMQVPAETPMAGKHLRQPEGETPLV---TVRPFREDRAHRLDGPETGRRVR 482 LH PP + PA P+ + L PE L+ + RP RLD P GR Sbjct: 138 LHGPQPPRKGAEPPA--PLTSRAL-PPEPAPALLGGPSPRPHECASPLRLDVPPEGRCAS 194 Query: 481 QAARPRLQHRPPRLEPPRS-NCSFSGTWFPPVAKVTTP-----RIIGSERLRLQVPGRRP 320 ARP L PRL FSG PP P R G L GR Sbjct: 195 APARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKHLLYLGRPE 254 Query: 319 GENARRLE 296 G R L+ Sbjct: 255 GYRGRALK 262 >AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein. Length = 962 Score = 32.7 bits (71), Expect = 1.7 Identities = 40/128 (31%), Positives = 46/128 (35%), Gaps = 9/128 (7%) Frame = -2 Query: 652 LHRRFPPGNAMQVPAETPMAGKHLRQPEGETPLV---TVRPFREDRAHRLDGPETGRRVR 482 LH PP + PA P+ + L PE L+ + RP RLD P GR Sbjct: 806 LHGPQPPRKGAEPPA--PLTSRAL-PPEPAPALLGGPSPRPHECASPLRLDVPPEGRCAS 862 Query: 481 QAARPRLQHRPPRLEPPRS-NCSFSGTWFPPVAKVTTP-----RIIGSERLRLQVPGRRP 320 ARP L PRL FSG PP P R G L GR Sbjct: 863 APARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKHLLYLGRPE 922 Query: 319 GENARRLE 296 G R L+ Sbjct: 923 GYRGRALK 930 >AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isoform 2 protein. Length = 922 Score = 32.7 bits (71), Expect = 1.7 Identities = 40/128 (31%), Positives = 46/128 (35%), Gaps = 9/128 (7%) Frame = -2 Query: 652 LHRRFPPGNAMQVPAETPMAGKHLRQPEGETPLV---TVRPFREDRAHRLDGPETGRRVR 482 LH PP + PA P+ + L PE L+ + RP RLD P GR Sbjct: 766 LHGPQPPRKGAEPPA--PLTSRAL-PPEPAPALLGGPSPRPHECASPLRLDVPPEGRCAS 822 Query: 481 QAARPRLQHRPPRLEPPRS-NCSFSGTWFPPVAKVTTP-----RIIGSERLRLQVPGRRP 320 ARP L PRL FSG PP P R G L GR Sbjct: 823 APARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKHLLYLGRPE 882 Query: 319 GENARRLE 296 G R L+ Sbjct: 883 GYRGRALK 890 >AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isoform 1 protein. Length = 930 Score = 32.7 bits (71), Expect = 1.7 Identities = 40/128 (31%), Positives = 46/128 (35%), Gaps = 9/128 (7%) Frame = -2 Query: 652 LHRRFPPGNAMQVPAETPMAGKHLRQPEGETPLV---TVRPFREDRAHRLDGPETGRRVR 482 LH PP + PA P+ + L PE L+ + RP RLD P GR Sbjct: 774 LHGPQPPRKGAEPPA--PLTSRAL-PPEPAPALLGGPSPRPHECASPLRLDVPPEGRCAS 830 Query: 481 QAARPRLQHRPPRLEPPRS-NCSFSGTWFPPVAKVTTP-----RIIGSERLRLQVPGRRP 320 ARP L PRL FSG PP P R G L GR Sbjct: 831 APARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKHLLYLGRPE 890 Query: 319 GENARRLE 296 G R L+ Sbjct: 891 GYRGRALK 898 >AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein. Length = 446 Score = 32.7 bits (71), Expect = 1.7 Identities = 40/128 (31%), Positives = 46/128 (35%), Gaps = 9/128 (7%) Frame = -2 Query: 652 LHRRFPPGNAMQVPAETPMAGKHLRQPEGETPLV---TVRPFREDRAHRLDGPETGRRVR 482 LH PP + PA P+ + L PE L+ + RP RLD P GR Sbjct: 290 LHGPQPPRKGAEPPA--PLTSRAL-PPEPAPALLGGPSPRPHECASPLRLDVPPEGRCAS 346 Query: 481 QAARPRLQHRPPRLEPPRS-NCSFSGTWFPPVAKVTTP-----RIIGSERLRLQVPGRRP 320 ARP L PRL FSG PP P R G L GR Sbjct: 347 APARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKHLLYLGRPE 406 Query: 319 GENARRLE 296 G R L+ Sbjct: 407 GYRGRALK 414 >AE006465-2|AAK61256.1| 1184|Homo sapiens some homology with holliday junction DNA helicase RUVB like protein. Length = 1184 Score = 32.7 bits (71), Expect = 1.7 Identities = 35/123 (28%), Positives = 41/123 (33%) Frame = -2 Query: 634 PGNAMQVPAETPMAGKHLRQPEGETPLVTVRPFREDRAHRLDGPETGRRVRQAARPRLQH 455 PG A+Q P P AG R P P R+ + D + R A+PR Sbjct: 57 PGRAVQAPDAVPGAGSS-RAPARWRP-------RDPGSSAPDAWQRFRPAPLRAQPRPPP 108 Query: 454 RPPRLEPPRSNCSFSGTWFPPVAKVTTPRIIGSERLRLQVPGRRPGENARRLEGDGAVST 275 RP PP G W P + R S R L P R R G A Sbjct: 109 RPAPGPPPPRKGGCGGQWRAPQDRTRGLRSRNSPRPPLAQPRLRHANQWRAPPGTPAADW 168 Query: 274 NRP 266 RP Sbjct: 169 RRP 171 >AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein. Length = 935 Score = 32.7 bits (71), Expect = 1.7 Identities = 40/128 (31%), Positives = 46/128 (35%), Gaps = 9/128 (7%) Frame = -2 Query: 652 LHRRFPPGNAMQVPAETPMAGKHLRQPEGETPLV---TVRPFREDRAHRLDGPETGRRVR 482 LH PP + PA P+ + L PE L+ + RP RLD P GR Sbjct: 779 LHGPQPPRKGAEPPA--PLTSRAL-PPEPAPALLGGPSPRPHECASPLRLDVPPEGRCAS 835 Query: 481 QAARPRLQHRPPRLEPPRS-NCSFSGTWFPPVAKVTTP-----RIIGSERLRLQVPGRRP 320 ARP L PRL FSG PP P R G L GR Sbjct: 836 APARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKHLLYLGRPE 895 Query: 319 GENARRLE 296 G R L+ Sbjct: 896 GYRGRALK 903 >AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein. Length = 930 Score = 32.7 bits (71), Expect = 1.7 Identities = 40/128 (31%), Positives = 46/128 (35%), Gaps = 9/128 (7%) Frame = -2 Query: 652 LHRRFPPGNAMQVPAETPMAGKHLRQPEGETPLV---TVRPFREDRAHRLDGPETGRRVR 482 LH PP + PA P+ + L PE L+ + RP RLD P GR Sbjct: 774 LHGPQPPRKGAEPPA--PLTSRAL-PPEPAPALLGGPSPRPHECASPLRLDVPPEGRCAS 830 Query: 481 QAARPRLQHRPPRLEPPRS-NCSFSGTWFPPVAKVTTP-----RIIGSERLRLQVPGRRP 320 ARP L PRL FSG PP P R G L GR Sbjct: 831 APARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKHLLYLGRPE 890 Query: 319 GENARRLE 296 G R L+ Sbjct: 891 GYRGRALK 898 >BC095466-1|AAH95466.1| 235|Homo sapiens SAT2 protein protein. Length = 235 Score = 32.3 bits (70), Expect = 2.3 Identities = 13/16 (81%), Positives = 13/16 (81%) Frame = -2 Query: 472 RPRLQHRPPRLEPPRS 425 RPRL RPPRL PPRS Sbjct: 12 RPRLPRRPPRLPPPRS 27 >AF442769-1|AAL35361.1| 368|Homo sapiens achaete-scute associated protein protein. Length = 368 Score = 32.3 bits (70), Expect = 2.3 Identities = 34/117 (29%), Positives = 47/117 (40%), Gaps = 5/117 (4%) Frame = -2 Query: 610 AETPMAGKHLRQPEGETP-LVTVRPFREDRAHRLD--GPETGRRVRQAARPRLQHRPPRL 440 A +P+AG R P L+ + P R GP R + A+ R+ H R Sbjct: 112 APSPVAGARSRAGPSRNPALLAMLPVSHAPRVRASSMGPGVEPRPARLAK-RVAHDWLRP 170 Query: 439 EPPRSNCSFSGTWFPPVAKVTTPRIIGSERLRLQVPG-RRPGENAR-RLEGDGAVST 275 PP G W +V P I+ + R + PG R P +AR EG A+ T Sbjct: 171 WPPPPRPQEGGAWVWAARRVLPPGILRASRTAVLSPGPRLPSHSARCACEGLAALGT 227 >BC080195-1|AAH80195.1| 881|Homo sapiens Rho GTPase activating protein 17 protein. Length = 881 Score = 31.5 bits (68), Expect = 4.0 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Frame = -1 Query: 773 QSAXTSPVLFXRQGHGXAPPMRGNMR-AYXRPCPRRSHSGDTPSSVPSGQRDAGTGRN 603 Q+A S L Q H A P +R A +P P G+ P P GQ +GT ++ Sbjct: 605 QAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQH 662 >AL833975-1|CAD38819.1| 414|Homo sapiens hypothetical protein protein. Length = 414 Score = 31.5 bits (68), Expect = 4.0 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Frame = -1 Query: 773 QSAXTSPVLFXRQGHGXAPPMRGNMR-AYXRPCPRRSHSGDTPSSVPSGQRDAGTGRN 603 Q+A S L Q H A P +R A +P P G+ P P GQ +GT ++ Sbjct: 138 QAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQH 195 >AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens cDNA FLJ46366 fis, clone TESTI4051388. ). Length = 286 Score = 31.5 bits (68), Expect = 4.0 Identities = 27/91 (29%), Positives = 34/91 (37%) Frame = -2 Query: 646 RRFPPGNAMQVPAETPMAGKHLRQPEGETPLVTVRPFREDRAHRLDGPETGRRVRQAARP 467 +R PP + P TP R P E+P T RA P T R +R Sbjct: 199 KRTPPTAS---PTRTPPRASPTRTPPTESPART-----PPRASPTRTPPTESPARTPSRA 250 Query: 466 RLQHRPPRLEPPRSNCSFSGTWFPPVAKVTT 374 + PPR P R+ S PP A T+ Sbjct: 251 STRRTPPRASPTRTPPRASPKRTPPTASPTS 281 >AK125358-1|BAC86144.1| 608|Homo sapiens protein ( Homo sapiens cDNA FLJ43368 fis, clone NT2RP8000483, moderately similar to Rattus norvegicus mRNA for Nadrin E2. ). Length = 608 Score = 31.5 bits (68), Expect = 4.0 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Frame = -1 Query: 773 QSAXTSPVLFXRQGHGXAPPMRGNMR-AYXRPCPRRSHSGDTPSSVPSGQRDAGTGRN 603 Q+A S L Q H A P +R A +P P G+ P P GQ +GT ++ Sbjct: 332 QAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQH 389 >AK123791-1|BAC85692.1| 138|Homo sapiens protein ( Homo sapiens cDNA FLJ41797 fis, clone NHNPC2000877. ). Length = 138 Score = 31.5 bits (68), Expect = 4.0 Identities = 26/101 (25%), Positives = 40/101 (39%) Frame = -2 Query: 430 RSNCSFSGTWFPPVAKVTTPRIIGSERLRLQVPGRRPGENARRLEGDGAVSTNRPDCDCT 251 R + FS W P + + + G E LR+ P E+ R A + P C Sbjct: 11 RQSRGFSPLWRP---RQSERKGRGCEHLRIYAAQGAP-ESCREPGWASAGNKGSPFCGTQ 66 Query: 250 LRASQRHDVSASQGAAPHGGSV*CNRPHHPHVEAAHHRVRP 128 A+ +HD S GA P + C R H + + + +P Sbjct: 67 ALANLKHDSPKSAGAVPEPSAAQCPRRTSDHRDWDNVKAQP 107 >AK027567-1|BAB55203.1| 803|Homo sapiens protein ( Homo sapiens cDNA FLJ14661 fis, clone NT2RP2002710, weakly similar to SH3-BINDING PROTEIN 3BP-1. ). Length = 803 Score = 31.5 bits (68), Expect = 4.0 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Frame = -1 Query: 773 QSAXTSPVLFXRQGHGXAPPMRGNMR-AYXRPCPRRSHSGDTPSSVPSGQRDAGTGRN 603 Q+A S L Q H A P +R A +P P G+ P P GQ +GT ++ Sbjct: 527 QAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQH 584 >AK023281-1|BAB14506.1| 726|Homo sapiens protein ( Homo sapiens cDNA FLJ13219 fis, clone NT2RP4001849, weakly similar to SH3-BINDING PROTEIN 3BP-1. ). Length = 726 Score = 31.5 bits (68), Expect = 4.0 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Frame = -1 Query: 773 QSAXTSPVLFXRQGHGXAPPMRGNMR-AYXRPCPRRSHSGDTPSSVPSGQRDAGTGRN 603 Q+A S L Q H A P +R A +P P G+ P P GQ +GT ++ Sbjct: 450 QAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQH 507 >AJ306731-1|CAC37948.1| 803|Homo sapiens RhoGAP protein protein. Length = 803 Score = 31.5 bits (68), Expect = 4.0 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Frame = -1 Query: 773 QSAXTSPVLFXRQGHGXAPPMRGNMR-AYXRPCPRRSHSGDTPSSVPSGQRDAGTGRN 603 Q+A S L Q H A P +R A +P P G+ P P GQ +GT ++ Sbjct: 527 QAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQH 584 >AK026800-1|BAB15557.1| 232|Homo sapiens protein ( Homo sapiens cDNA: FLJ23147 fis, clone LNG09295. ). Length = 232 Score = 31.1 bits (67), Expect = 5.3 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Frame = +3 Query: 222 ETSWRCDARSVQSQSGRFVDTA---PSPSRRRAFSPGRLPGTWRRRRSLP 362 +T W+ +RSV ++ D PSP R + FS LP +W R P Sbjct: 156 DTEWQTQSRSVTQAGVQWCDLCLLQPSPPRFKRFSCLSLPSSWDYRHPPP 205 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 131,201,009 Number of Sequences: 237096 Number of extensions: 3282508 Number of successful extensions: 12206 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 10597 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 12171 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 10761200974 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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