Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_B17
(851 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48146| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 1e-30
SB_26157| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 5e-17
SB_486| Best HMM Match : Toxin_3 (HMM E-Value=4.5) 30 2.7
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_22107| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_21645| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_51641| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_45794| Best HMM Match : zf-CCCH (HMM E-Value=3.1e-27) 29 6.3
SB_31849| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_3585| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_37000| Best HMM Match : Astacin (HMM E-Value=5.5e-19) 28 8.4
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) 28 8.4
>SB_48146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 810
Score = 130 bits (314), Expect = 1e-30
Identities = 65/98 (66%), Positives = 71/98 (72%)
Frame = +3
Query: 507 KSELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQIRQEKPYYIADPEVDSLMVQAIQVL 686
K ELATCTPR+PG GGDVCSS SFNEDI F+KQ M+QAIQVL
Sbjct: 89 KCELATCTPREPGAVGGDVCSSASFNEDIQAFAKQ-----------------MIQAIQVL 131
Query: 687 RFHLLELEKVHELCDNFCHRYISCLKGXMPIDLXIDXR 800
RFHLLELEKVHELCDNFC RYI+CLKG MPIDL +D +
Sbjct: 132 RFHLLELEKVHELCDNFCKRYITCLKGKMPIDLVMDEK 169
Score = 33.9 bits (74), Expect = 0.17
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 439 VHKRDKDAIYGHPLVP 486
+HKRDK+ +YGHPL P
Sbjct: 66 IHKRDKEVLYGHPLFP 81
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 446 RETKTLFTGIPWFPLLALIFEK 511
+ K + G P FPLLALIFEK
Sbjct: 68 KRDKEVLYGHPLFPLLALIFEK 89
>SB_26157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1097
Score = 85.4 bits (202), Expect = 5e-17
Identities = 40/73 (54%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Frame = +3
Query: 558 DVCSSESFNEDIAVFSKQIRQE-KPYYIADPEVDSLMVQAIQVLRFHLLELEKVHELCDN 734
D +S++F+ DI F Q +E KP + D E+D+L+++AIQV R HLLELEKV+ELC +
Sbjct: 698 DCPTSDAFDNDIKNFMMQHNREGKPCFSGDQELDNLIIKAIQVFRIHLLELEKVNELCKD 757
Query: 735 FCHRYISCLKGXM 773
FC RYI+CLKG M
Sbjct: 758 FCQRYIACLKGKM 770
>SB_486| Best HMM Match : Toxin_3 (HMM E-Value=4.5)
Length = 334
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +3
Query: 84 PTNTLHE*LRPSRVHYDTSELAGRCDSVRSY--MCMCARACVVS*VGPV 224
P N L PSR H D + + C V Y M MC+ +C V P+
Sbjct: 172 PHNVLMSMCFPSRAHVDVAPITCSCRCVPHYMLMLMCSPSCAYVDVFPI 220
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 15 PDCRARRASRFTAPRSATPRPEPPT 89
P+CR T+P +TPRP PPT
Sbjct: 1340 PNCRKSCGLCTTSPIPSTPRPRPPT 1364
>SB_22107| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 556 PPATPGSRGVQVASSLFEDQSQQGEPGDA 470
PP PG RG+Q ++ QG+PG A
Sbjct: 74 PPGVPGPRGMQGEEGPAGNKGPQGDPGPA 102
>SB_21645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Frame = -3
Query: 558 LRPPRQGPGGYRSLAHFSKIRASRGNQGMPVNSVFVSLVD*WFPGEGV-SGCCRRGV--- 391
L P+ P G R L SKI ++ + +N + + W P G + RG
Sbjct: 50 LNEPKTTPEGVRQLLDLSKIHYLEDSE-ITINGIMIYGTP-WVPTFGSWAFMLDRGPDLQ 107
Query: 390 VHWSQVGMGQPVLVVHRSPL 331
W Q+ G VLV H PL
Sbjct: 108 AKWDQIPDGTDVLVTHTPPL 127
>SB_51641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 281 SWLSLGTTRASTAEVTWRGERCTTSTG*PI 370
+W+ G + TAEVTW G+ G P+
Sbjct: 156 AWVVFGKDKIETAEVTWHGKGNEDKRGKPV 185
>SB_45794| Best HMM Match : zf-CCCH (HMM E-Value=3.1e-27)
Length = 527
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -3
Query: 246 GHHERFRSRAQPKTPHKHVHTYTYMIGHCHSGPLAH*CHNA 124
G+HE + PK + T+ + IG C GP H HNA
Sbjct: 180 GYHELRQLARHPKYKTELCRTF-HTIGFCPYGPRCHFIHNA 219
>SB_31849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +3
Query: 6 ECPPDCRARR-ASRFTAPRSATPRPEPPTNTLHE*LRPSRVHYDTSELAGRCDSVRS 173
+ PP RAR R PR P P+PP ++ RP + E DS RS
Sbjct: 21 QIPPWTRARSLVDRARYPRGTAPEPDPPVDSAR--ARPPFPPWTVPEQETPVDSARS 75
>SB_3585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 580 KDSEEHTSPPATPGSRGVQVASSLFEDQSQQGEPGDAR 467
+D+ T TPGSR VQ++ D + G PG +
Sbjct: 903 RDTLHDTIRHGTPGSRKVQLSHGTLHDTIRHGTPGSRK 940
>SB_37000| Best HMM Match : Astacin (HMM E-Value=5.5e-19)
Length = 1341
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 163 VSDHICVCVHVLVWCLRLG 219
VSD +CVC +L CLR+G
Sbjct: 61 VSDVVCVCDSILYKCLRVG 79
>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
Length = 1080
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/33 (54%), Positives = 19/33 (57%)
Frame = +3
Query: 240 GGQRSPTPGLGPSFHGSA*VRREPPRRRLHGGG 338
G PTP PS GS+ VRR PRRR GGG
Sbjct: 977 GSPSIPTPS-EPSSSGSSIVRR--PRRRRGGGG 1006
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,716,747
Number of Sequences: 59808
Number of extensions: 667515
Number of successful extensions: 2114
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2098
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2419355818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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