Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_B16
(857 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81564-6|CAB04572.1| 678|Caenorhabditis elegans Hypothetical pr... 61 9e-10
AF016853-1|AAB94552.1| 678|Caenorhabditis elegans HMP-2 protein. 61 9e-10
U46673-7|AAC48154.1| 811|Caenorhabditis elegans Beta-catenin/ar... 32 0.45
AF063646-1|AAC17424.1| 811|Caenorhabditis elegans beta-catenin/... 32 0.45
Z81464-1|CAE17676.1| 131|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z75525-7|CAH10769.1| 573|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z75525-6|CAA99765.2| 623|Caenorhabditis elegans Hypothetical pr... 29 5.6
CU457741-8|CAM36349.1| 544|Caenorhabditis elegans Hypothetical ... 29 5.6
AF003925-1|AAB61344.1| 573|Caenorhabditis elegans mRNA capping ... 29 5.6
AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical ... 28 7.4
Z69794-5|CAA93682.1| 506|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z69789-6|CAA93652.1| 506|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z68319-4|CAA92702.1| 884|Caenorhabditis elegans Hypothetical pr... 28 9.8
>Z81564-6|CAB04572.1| 678|Caenorhabditis elegans Hypothetical
protein K05C4.6 protein.
Length = 678
Score = 61.3 bits (142), Expect = 9e-10
Identities = 28/95 (29%), Positives = 59/95 (62%)
Frame = +2
Query: 443 QTRSQRVRAAMFPETLEEGIEIPSTQLDPAQPTAVQRLAEPSQMLKHAVVNLINYQDDAD 622
+TR+ R+R+AMFP+ + +T + + V+ + P+Q LK +V++L+ Y+ D
Sbjct: 18 ETRTSRIRSAMFPDWIPPTSAAEATN---STTSIVEMMQMPTQQLKQSVMDLLTYEGSND 74
Query: 623 LATRAIPELIKLLNDEDQVXVSQAAMMVHQLSKKE 727
++ ++P+L+KL+ D D+ V++A + LS+++
Sbjct: 75 MSGLSLPDLVKLMCDHDESVVARAVHRAYMLSRED 109
>AF016853-1|AAB94552.1| 678|Caenorhabditis elegans HMP-2 protein.
Length = 678
Score = 61.3 bits (142), Expect = 9e-10
Identities = 28/95 (29%), Positives = 59/95 (62%)
Frame = +2
Query: 443 QTRSQRVRAAMFPETLEEGIEIPSTQLDPAQPTAVQRLAEPSQMLKHAVVNLINYQDDAD 622
+TR+ R+R+AMFP+ + +T + + V+ + P+Q LK +V++L+ Y+ D
Sbjct: 18 ETRTSRIRSAMFPDWIPPTSAAEATN---STTSIVEMMQMPTQQLKQSVMDLLTYEGSND 74
Query: 623 LATRAIPELIKLLNDEDQVXVSQAAMMVHQLSKKE 727
++ ++P+L+KL+ D D+ V++A + LS+++
Sbjct: 75 MSGLSLPDLVKLMCDHDESVVARAVHRAYMLSRED 109
>U46673-7|AAC48154.1| 811|Caenorhabditis elegans
Beta-catenin/armadillo relatedprotein 1 protein.
Length = 811
Score = 32.3 bits (70), Expect = 0.45
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 602 NYQDDADLATRAIPELIKLLNDEDQVXVSQAAMMVHQLSKKE 727
N D RAIPEL L+ D+D V +A +++ ++K E
Sbjct: 108 NQADGQYNTVRAIPELTMLMKDQDNEVVHKAVILMQNIAKME 149
>AF063646-1|AAC17424.1| 811|Caenorhabditis elegans
beta-catenin/armadillo homologBAR-1 protein.
Length = 811
Score = 32.3 bits (70), Expect = 0.45
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 602 NYQDDADLATRAIPELIKLLNDEDQVXVSQAAMMVHQLSKKE 727
N D RAIPEL L+ D+D V +A +++ ++K E
Sbjct: 108 NQADGQYNTVRAIPELTMLMKDQDNEVVHKAVILMQNIAKME 149
>Z81464-1|CAE17676.1| 131|Caenorhabditis elegans Hypothetical
protein B0462.4 protein.
Length = 131
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +1
Query: 157 SYQIPSSQSRTMSHSSYV---ASDVPMAPNKEQQTLMWQQN 270
+Y+ PS++S T +HS ++ DVP+ P QT + +N
Sbjct: 39 NYRRPSTESTTSNHSIHIPVGVDDVPVLPTSTMQTPHFTKN 79
>Z75525-7|CAH10769.1| 573|Caenorhabditis elegans Hypothetical
protein C03D6.3b protein.
Length = 573
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/98 (21%), Positives = 42/98 (42%)
Frame = +2
Query: 401 FTQEQVDDMNQQLSQTRSQRVRAAMFPETLEEGIEIPSTQLDPAQPTAVQRLAEPSQMLK 580
+ Q+ +DD+ + T ++ A P+ E STQ+D +P+ Q++ +
Sbjct: 163 YKQDYIDDLFARYDPTEDDKILAPEKPDWEREMSIGMSTQIDNGRPSTSQQIPATNGNNN 222
Query: 581 HAVVNLINYQDDADLATRAIPELIKLLNDEDQVXVSQA 694
L D++ L + +K+ DE + + QA
Sbjct: 223 QNGNQLSGGGDNSKLFMDGLIRGVKVCEDEGKKSMLQA 260
>Z75525-6|CAA99765.2| 623|Caenorhabditis elegans Hypothetical
protein C03D6.3a protein.
Length = 623
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/98 (21%), Positives = 42/98 (42%)
Frame = +2
Query: 401 FTQEQVDDMNQQLSQTRSQRVRAAMFPETLEEGIEIPSTQLDPAQPTAVQRLAEPSQMLK 580
+ Q+ +DD+ + T ++ A P+ E STQ+D +P+ Q++ +
Sbjct: 175 YKQDYIDDLFARYDPTEDDKILAPEKPDWEREMSIGMSTQIDNGRPSTSQQIPATNGNNN 234
Query: 581 HAVVNLINYQDDADLATRAIPELIKLLNDEDQVXVSQA 694
L D++ L + +K+ DE + + QA
Sbjct: 235 QNGNQLSGGGDNSKLFMDGLIRGVKVCEDEGKKSMLQA 272
>CU457741-8|CAM36349.1| 544|Caenorhabditis elegans Hypothetical
protein C42C1.8 protein.
Length = 544
Score = 28.7 bits (61), Expect = 5.6
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 371 LTLIRVLLRXF-TQEQVDDMNQQLSQTRSQRVRAAMFPETLEEGIEIPSTQLDPAQPTAV 547
L I L+R TQ QVD N+ Q + A +P + +I +T P+Q T
Sbjct: 158 LNAIGALIRALSTQPQVDPQNRFPICLLGQSIAAMAYPFIMFLPSKISATCFPPSQRTIA 217
Query: 548 QRLAEPSQMLKHAVVNLI 601
+ + L VVNL+
Sbjct: 218 TTIGVMANPLGVMVVNLV 235
>AF003925-1|AAB61344.1| 573|Caenorhabditis elegans mRNA capping
enzyme protein.
Length = 573
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/98 (21%), Positives = 42/98 (42%)
Frame = +2
Query: 401 FTQEQVDDMNQQLSQTRSQRVRAAMFPETLEEGIEIPSTQLDPAQPTAVQRLAEPSQMLK 580
+ Q+ +DD+ + T ++ A P+ E STQ+D +P+ Q++ +
Sbjct: 163 YKQDYIDDLFARYDPTEDDKILAPEKPDWEREMSIGMSTQIDNGRPSTSQQIPATNGNNN 222
Query: 581 HAVVNLINYQDDADLATRAIPELIKLLNDEDQVXVSQA 694
L D++ L + +K+ DE + + QA
Sbjct: 223 QNGNQLSGGGDNSKLFMDGLIRGVKVCEDEGKKSMLQA 260
>AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical
protein Y92H12A.2 protein.
Length = 724
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 301 GAATQVPSLTGKEDDEM 351
GAAT+VP L GK DDE+
Sbjct: 304 GAATRVPLLRGKTDDEI 320
>Z69794-5|CAA93682.1| 506|Caenorhabditis elegans Hypothetical
protein F17H10.1 protein.
Length = 506
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -2
Query: 550 LDSSWLSGIQLCRWNFNSFLQRFRKHSRTDSLRSSLRKLLIHI-INLFLSEXPEQNPD 380
LDS WL I N S ++R H + SSLR + + +++ P++ P+
Sbjct: 209 LDSEWLPLISTMVTNGKSLMERLLSHKVCQNALSSLRSINYRLSSDVYEMYLPDEEPE 266
>Z69789-6|CAA93652.1| 506|Caenorhabditis elegans Hypothetical
protein F17H10.1 protein.
Length = 506
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -2
Query: 550 LDSSWLSGIQLCRWNFNSFLQRFRKHSRTDSLRSSLRKLLIHI-INLFLSEXPEQNPD 380
LDS WL I N S ++R H + SSLR + + +++ P++ P+
Sbjct: 209 LDSEWLPLISTMVTNGKSLMERLLSHKVCQNALSSLRSINYRLSSDVYEMYLPDEEPE 266
>Z68319-4|CAA92702.1| 884|Caenorhabditis elegans Hypothetical
protein T23G7.4 protein.
Length = 884
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/41 (31%), Positives = 27/41 (65%)
Frame = +2
Query: 530 AQPTAVQRLAEPSQMLKHAVVNLINYQDDADLATRAIPELI 652
A P A+QRL + +QML + ++N+ ++ L +A+P+++
Sbjct: 451 ASPDAIQRLEDINQMLTN-IINVSSWLILNALVPKALPDMV 490
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,563,226
Number of Sequences: 27780
Number of extensions: 370377
Number of successful extensions: 982
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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