Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_B14
         (853 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0299 - 22086964-22087002,22087878-22087978,22088079-220888...    29   3.6  
07_03_0423 + 18035688-18036572,18036659-18036978,18052618-180527...    29   3.6  
09_01_0162 + 2405662-2406033,2406086-2406460                           29   4.7  
12_02_0483 + 19546295-19546397,19547163-19547482,19547606-195486...    29   6.2  
08_02_1129 - 24513568-24514296,24515380-24515817                       29   6.2  
02_01_0607 - 4549248-4549290,4550193-4550337,4550438-4551185,455...    29   6.2  

>11_06_0299 -
           22086964-22087002,22087878-22087978,22088079-22088826,
           22089201-22089373,22089403-22089676,22089761-22090069
          Length = 547

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 18/50 (36%), Positives = 29/50 (58%)
 Frame = -1

Query: 373 IMSNCKWKNSKSEFATKAGLLIRTNTQQSRNKLN*KKKKHFVTRNLNFRN 224
           I +   WKN  S+FA K+G   +   +Q +NKL+  KK++  T  + F+N
Sbjct: 32  IFTTTGWKNVVSKFAEKSG--DKRTKKQLKNKLDVLKKEY--TMFMEFKN 77


>07_03_0423 +
           18035688-18036572,18036659-18036978,18052618-18052724,
           18053001-18053104,18054129-18054328,18054422-18054522,
           18054695-18054841,18055007-18055166,18055287-18055368,
           18056070-18056336,18056846-18056973,18057513-18057672
          Length = 886

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 388 KGLKIIQNVTAKGKQQTIKHFIPHGSITSAVSQGDVVACVLLL 516
           +G + I ++ +   +QTI HFI  G +   V  GD+V   +L+
Sbjct: 672 EGTRTIDSIISAYAKQTIPHFIGAGHVILDVIPGDMVVNAMLV 714


>09_01_0162 + 2405662-2406033,2406086-2406460
          Length = 248

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 491 MWSRVCYCCTTLSPAALFTSTL 556
           +WS++CY   T +PA LF S L
Sbjct: 212 LWSQICYHVFTRAPAFLFASVL 233


>12_02_0483 +
           19546295-19546397,19547163-19547482,19547606-19548611,
           19549890-19549985,19550500-19551551
          Length = 858

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
 Frame = -1

Query: 418 LLHSVLFSGLYVKPSIMSN-CKWKNSKSEFATKAGLLIRTNTQQSRNKLN*KKK----KH 254
           L H+VLFS +Y++P+     C    +++ F  K+   I      + NK+   K+      
Sbjct: 311 LFHNVLFSKIYIQPNPNKTLCYHSQTENSFKRKSQNQISAKALCASNKILVHKQDLFGSI 370

Query: 253 FVTRNLNFRNTVLANEKQT 197
           FV  ++N   T+   E++T
Sbjct: 371 FVISDINQFGTINPEEERT 389


>08_02_1129 - 24513568-24514296,24515380-24515817
          Length = 388

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 533 PVRGLYSSNTHATTSPCDTALVMLP*GMKCLI 438
           P  G+YS   H      D +L +L  GM+C I
Sbjct: 109 PFHGVYSQRIHGVHGAVDISLALLREGMECTI 140


>02_01_0607 -
           4549248-4549290,4550193-4550337,4550438-4551185,
           4551504-4551980,4552066-4552374
          Length = 573

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = -1

Query: 373 IMSNCKWKNSKSEFATKAGLLIRTNTQQSRNKLN*KKKKHFVTRNLNFRN 224
           I +   WKN  S+FA K+G       +Q +NKL+  KK++  T  + F+N
Sbjct: 32  IFTTTGWKNVVSKFAEKSG--DERTKKQLKNKLDVLKKEY--TMFMEFKN 77


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,387,870
Number of Sequences: 37544
Number of extensions: 369882
Number of successful extensions: 909
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)