Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_B14
(853 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6907| Best HMM Match : PAN (HMM E-Value=0.019) 33 0.22
SB_28785| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_22681| Best HMM Match : PAN (HMM E-Value=0.0027) 31 1.6
SB_29300| Best HMM Match : GFO_IDH_MocA (HMM E-Value=2.1e-17) 30 2.1
SB_25827| Best HMM Match : Matrix (HMM E-Value=5.6) 30 2.7
SB_3142| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_44571| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_30485| Best HMM Match : fn3 (HMM E-Value=0.0045) 29 6.3
SB_23911| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_55209| Best HMM Match : WRKY (HMM E-Value=1.1) 28 8.4
SB_48087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_14459| Best HMM Match : F5_F8_type_C (HMM E-Value=3e-22) 28 8.4
>SB_6907| Best HMM Match : PAN (HMM E-Value=0.019)
Length = 324
Score = 33.5 bits (73), Expect = 0.22
Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 6/85 (7%)
Frame = -1
Query: 766 GSIXFVXPESXFXETSLPSDDPEXSC-WSEEPRAFEACVRYRRISFDFPAYR-----SAL 605
GS F PE D+ E +C S+ A R F + Y + L
Sbjct: 60 GSYCFDTPECFSYNVGPGPDELEFTCELSDSDAAQHPDDLVPRPGFTYQGYEVSGRMTKL 119
Query: 604 VNACRASPPCAQSRICKRGREQGSR 530
VNAC S PC+ R C+ G E R
Sbjct: 120 VNACLTSAPCSSHRACRIGYEDPFR 144
>SB_28785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 5/72 (6%)
Frame = +1
Query: 406 QNVTAKGKQQTIKHFIPHG-----SITSAVSQGDVVACVLLLYNPLTGCPVHVHAYRCDS 570
QN+ AK HF S+T AV Q + C PL+G PV A + D+
Sbjct: 29 QNIRAKSFSLAASHFFKTSKQRFESLTGAVGQLGTLGCYEQASKPLSGLPVSQFAKQTDT 88
Query: 571 EHTAEMLYTHLQ 606
L T L+
Sbjct: 89 SSDVRNLNTVLK 100
>SB_22681| Best HMM Match : PAN (HMM E-Value=0.0027)
Length = 329
Score = 30.7 bits (66), Expect = 1.6
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 5/84 (5%)
Frame = -1
Query: 766 GSIXFVXPESXFXETSLPSDDPEXSC-WSEEPRAFEACVRYRRISFDFPAYRSALV---- 602
GS F PE SD+ + +C S+ A R F + AY +V
Sbjct: 69 GSYCFDSPECFSYNVGPGSDELKFTCELSDSDAAQHPDDLVPREGFTYHAYELCIVVDPQ 128
Query: 601 NACRASPPCAQSRICKRGREQGSR 530
N C S C R+C+ G E+ R
Sbjct: 129 NTCLESGSCPSGRVCRIGYEEPYR 152
>SB_29300| Best HMM Match : GFO_IDH_MocA (HMM E-Value=2.1e-17)
Length = 634
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 607 LVNACRASPPCAQSRICKRGREQGSR 530
LVNAC S PC+ R C+ G E R
Sbjct: 422 LVNACLTSVPCSSHRACRIGYEDPFR 447
>SB_25827| Best HMM Match : Matrix (HMM E-Value=5.6)
Length = 550
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = -1
Query: 424 PWLLHSVLFSGLYVKPSIMSNCKWKNSKSEFATKAGLLIRTNTQQSRNKLN*KKKKHFV 248
PW +SV FSG + + S + SKS G + QQ+ +K + KKK+F+
Sbjct: 48 PWYANSV-FSGFSCRKNYQS---LQTSKSNVKLATGFSFTADFQQTSHKYSEAKKKYFI 102
>SB_3142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2209
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Frame = +1
Query: 493 VVACVLLLYNPLTGCP-VHVHAYRCDSEHTAEMLYTHLQALIDRPENQKKFADIERKLQM 669
V+ C+ LY P+ +++H YR ++ EM + HL +I + + ++M
Sbjct: 1134 VLMCIQALYCPIVVYQFINLHVYRYRNQCEQEMTFLHLSEVI--AALNSSISPVIYMVRM 1191
Query: 670 RGALPTSKXPPDRRWAAKSPXXRTPGXRKXCXRTYXQSGC 789
R + + + P RTP R + Q+ C
Sbjct: 1192 RELKVAVTGNLRKIFGVRYPPIRTPRYRPALQKNPLQTPC 1231
>SB_44571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 577 TAEMLYTHLQALIDRPENQKKFADIERKLQMRGALPTSK 693
TA+ LY ++ ++D P ++ A I R +Q R PT +
Sbjct: 302 TADQLYRTIRRVVDEPRFKENAARISRLMQDRRRSPTEE 340
>SB_30485| Best HMM Match : fn3 (HMM E-Value=0.0045)
Length = 514
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 539 GQPVRGLYSSNTHATTSPCDTALVMLP*GM 450
G P + LY THATT+P T P G+
Sbjct: 260 GVPTQQLYPGGTHATTTPRGTHATTTPRGV 289
>SB_23911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 568 SEHT-AEMLYTHLQALIDRPENQKKFADIERKLQMRGALPTSKXPPDRRWAAKSP 729
SE T + LY QA ++ E K DIE+ LQ+ A+ + R+ KSP
Sbjct: 148 SEDTNIKALYRRAQAYLELDEIDKSREDIEKALQVDSAMHKTHSDVVLRFKTKSP 202
>SB_55209| Best HMM Match : WRKY (HMM E-Value=1.1)
Length = 386
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = -3
Query: 353 EKFQVRIRNQ-SRASNSHKHATIPE*AKLKKKKTLCNSQSELS*HCPCKRKT--NFYQY 186
+K +++++ + ++ SN +IP K LC+S HCP + + N++QY
Sbjct: 264 DKAKLKVQEEFNKPSNYFNETSIPANESDKNAHKLCSSVDTAKAHCPVRWRAMENWFQY 322
>SB_48087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +1
Query: 409 NVTAKGKQQTIKHFIPHGSITSAVSQGDVVACVLLLYNPLTGCPVHVHAYRCDSEHTAEM 588
NV+A ++ F AV + ACV L+ PL+ V V A ++E A++
Sbjct: 973 NVSAGSHHSSLTSFTDRACSPMAVEEESQSACVPLVGVPLSQALVKVQAMINEAELEADL 1032
Query: 589 LYTHLQAL 612
++LQ +
Sbjct: 1033 ETSYLQTV 1040
>SB_14459| Best HMM Match : F5_F8_type_C (HMM E-Value=3e-22)
Length = 173
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/65 (29%), Positives = 25/65 (38%)
Frame = +1
Query: 526 LTGCPVHVHAYRCDSEHTAEMLYTHLQALIDRPENQKKFADIERKLQMRGALPTSKXPPD 705
L+G PVH R D + M E Q+K A RK + ++ D
Sbjct: 2 LSGSPVHDRGRRFDQTNLRPMAEVSFPRERQPSEIQRKEASANRKALNQQQRKNARLNGD 61
Query: 706 RRWAA 720
R WAA
Sbjct: 62 RYWAA 66
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,160,426
Number of Sequences: 59808
Number of extensions: 461915
Number of successful extensions: 1045
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2419355818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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