BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP02_FL5_B12 (852 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 24 1.3 AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein. 23 3.1 AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 21 9.4 >U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. Length = 470 Score = 24.2 bits (50), Expect = 1.3 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Frame = -3 Query: 691 SLRCSR-SPTLWRLRCPATNPEASCWSEEPRAFEACVRYRRISF 563 SLR + PTL +R P +NP E R F A R S+ Sbjct: 276 SLRAADIQPTLSSIRHPESNPSERVMRELGRIFRAYCRENHASW 319 >AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein. Length = 256 Score = 23.0 bits (47), Expect = 3.1 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +1 Query: 349 PRENSRRSSISYLTAASRVPCHKE 420 PR+ +R S+SY T VP H E Sbjct: 56 PRDPNRARSVSYSTVIQSVP-HPE 78 >AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein protein. Length = 392 Score = 21.4 bits (43), Expect = 9.4 Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 2/35 (5%) Frame = -3 Query: 694 ISLRC--SRSPTLWRLRCPATNPEASCWSEEPRAF 596 + L C S P T+ +SCWSE+ +F Sbjct: 14 LQLECNWSSGPNATLQSSACTDDLSSCWSEDMGSF 48 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 180,203 Number of Sequences: 336 Number of extensions: 3771 Number of successful extensions: 6 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of database: 122,585 effective HSP length: 56 effective length of database: 103,769 effective search space used: 23555563 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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