Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_B12
(852 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z34802-4|CAA84335.4| 365|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z48716-6|CAH04739.1| 238|Caenorhabditis elegans Hypothetical pr... 34 0.15
Z48716-5|CAA88598.2| 264|Caenorhabditis elegans Hypothetical pr... 34 0.15
Z82051-10|CAB04822.2| 577|Caenorhabditis elegans Hypothetical p... 29 3.2
U41037-3|AAA82389.1| 378|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL021175-11|CAA15973.2| 577|Caenorhabditis elegans Hypothetical... 29 3.2
Z69793-7|CAA93676.3| 527|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z69791-7|CAA93663.3| 527|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exteri... 29 5.5
AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector ... 29 5.5
Z83234-7|CAB76745.1| 667|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z82067-4|CAB76738.1| 667|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 28 9.7
U80450-6|AAB37831.1| 544|Caenorhabditis elegans Hypothetical pr... 28 9.7
AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical ... 28 9.7
>Z34802-4|CAA84335.4| 365|Caenorhabditis elegans Hypothetical
protein M88.4 protein.
Length = 365
Score = 70.9 bits (166), Expect = 1e-12
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 9/113 (7%)
Frame = +3
Query: 144 MALRLKKDIKKASYYVWFLGAQESRGLRGEEFALPAITLLEERARELEPFKVTLQVSHKG 323
M+ + I K+ +YVW+LG++E+ G+RG LP + L + + + P K T+Q+S KG
Sbjct: 1 MSWFFQSKIAKSHFYVWYLGSKEADGVRGSAVVLPVMRQLLKESFKKTPSKATVQISSKG 60
Query: 324 LKIIQNVTA-----KGKQQTIKHFIPHGSITSAVSQ----GDVVACVLLLYNP 455
LK+IQ+V A K K Q +K I IT +++ DVV V+L+ NP
Sbjct: 61 LKLIQSVPAMSRSGKVKMQLVKFQIAANCITYSITGKAPFDDVVGVVMLVLNP 113
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +1
Query: 472 VHVHAYRCDSEHTAEMLYTHLQALIDRPENQKKFADIERKLQMRGAL-PTSKKPPDSSLG 648
+HVH YRCDS TA+++ +LQ L+ RP+ Q+ D+E +L + G L P + + S+
Sbjct: 119 MHVHCYRCDSAETAQIMLANLQLLLSRPDVQRSINDLEHRLFLSGLLVPRNNNNSEGSVN 178
Query: 649 SEVSRESDSGS 681
R S S
Sbjct: 179 QNALRPQRSCS 189
>Z48716-6|CAH04739.1| 238|Caenorhabditis elegans Hypothetical
protein F59B10.4b protein.
Length = 238
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = -3
Query: 658 RLRCPATNPEASCWSEEPRAFEACVRYRRISFDSPAYRSALVNACRASPPCAQSRICKRG 479
++ CPA + S + P ++ ACVR D P+Y AL N+ + P + S
Sbjct: 155 KICCPAVVNDESNLEKSPPSYNACVRATASEKDLPSYEDALKNSSQ-QPSTSSSSSSPPS 213
Query: 478 REP 470
R P
Sbjct: 214 RPP 216
>Z48716-5|CAA88598.2| 264|Caenorhabditis elegans Hypothetical
protein F59B10.4a protein.
Length = 264
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = -3
Query: 658 RLRCPATNPEASCWSEEPRAFEACVRYRRISFDSPAYRSALVNACRASPPCAQSRICKRG 479
++ CPA + S + P ++ ACVR D P+Y AL N+ + P + S
Sbjct: 181 KICCPAVVNDESNLEKSPPSYNACVRATASEKDLPSYEDALKNSSQ-QPSTSSSSSSPPS 239
Query: 478 REP 470
R P
Sbjct: 240 RPP 242
>Z82051-10|CAB04822.2| 577|Caenorhabditis elegans Hypothetical
protein T23D5.2 protein.
Length = 577
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +1
Query: 385 LTAASRVPCHKEMWSRVCYCCTTLSPAALVHVHAYRCD 498
+TAA+ +P E+++RV + CT L A L+++ A+ +
Sbjct: 4 MTAATVLPFIAEIFTRVGFVCTCLFNAILIYLTAFHVE 41
>U41037-3|AAA82389.1| 378|Caenorhabditis elegans Hypothetical
protein T24C12.1 protein.
Length = 378
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 442 CCTTLSPAALVHVHAYRCDSEHTAEMLYTHLQAL 543
CCT + A +V V A + HT+ LY+H+Q L
Sbjct: 155 CCTLIVDAVMVFVFASIMSTAHTS--LYSHIQVL 186
>AL021175-11|CAA15973.2| 577|Caenorhabditis elegans Hypothetical
protein T23D5.2 protein.
Length = 577
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +1
Query: 385 LTAASRVPCHKEMWSRVCYCCTTLSPAALVHVHAYRCD 498
+TAA+ +P E+++RV + CT L A L+++ A+ +
Sbjct: 4 MTAATVLPFIAEIFTRVGFVCTCLFNAILIYLTAFHVE 41
>Z69793-7|CAA93676.3| 527|Caenorhabditis elegans Hypothetical
protein F39D8.4 protein.
Length = 527
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 553 PENQKKFADIERKLQMRGALPTSKKPPDSSLGSEVSRESDSGSN 684
PEN K+ I +K+ P SKK +GS + + D G N
Sbjct: 389 PENTKRVKSITKKVTSATGSPLSKK---GEIGSSIGDKGDRGDN 429
>Z69791-7|CAA93663.3| 527|Caenorhabditis elegans Hypothetical
protein F39D8.4 protein.
Length = 527
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 553 PENQKKFADIERKLQMRGALPTSKKPPDSSLGSEVSRESDSGSN 684
PEN K+ I +K+ P SKK +GS + + D G N
Sbjct: 389 PENTKRVKSITKKVTSATGSPLSKK---GEIGSSIGDKGDRGDN 429
>AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exterior
protein 2 protein.
Length = 1262
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 499 SEHTAEMLYTHLQALIDRPENQKKFADIERKLQMRGALPTSKKPPDSSLGSEVSRESD 672
S T + +Y LQA I N+ ++ K + ++ S K S G+E++R +D
Sbjct: 467 SNSTRKCVYVELQAFIHHTINEPLQKAVKHKKDLLASILQSVKDSISDAGNELNRMTD 524
>AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector
protein.
Length = 1262
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 499 SEHTAEMLYTHLQALIDRPENQKKFADIERKLQMRGALPTSKKPPDSSLGSEVSRESD 672
S T + +Y LQA I N+ ++ K + ++ S K S G+E++R +D
Sbjct: 467 SNSTRKCVYVELQAFIHHTINEPLQKAVKHKKDLLASILQSVKDSISDAGNELNRMTD 524
>Z83234-7|CAB76745.1| 667|Caenorhabditis elegans Hypothetical
protein W03H9.4 protein.
Length = 667
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 564 KEIRRYRTQASNARGSSDQQEASGFVAGQRSLQRVGLREQRREMRR 701
K + R + S + SD++ +A QRSL++ R Q+ EM++
Sbjct: 7 KHKKERRRERSPSTSDSDEERLQKRLAEQRSLKKDEKRRQKEEMKK 52
>Z82067-4|CAB76738.1| 667|Caenorhabditis elegans Hypothetical
protein W03H9.4 protein.
Length = 667
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 564 KEIRRYRTQASNARGSSDQQEASGFVAGQRSLQRVGLREQRREMRR 701
K + R + S + SD++ +A QRSL++ R Q+ EM++
Sbjct: 7 KHKKERRRERSPSTSDSDEERLQKRLAEQRSLKKDEKRRQKEEMKK 52
>Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -1
Query: 333 LFSGLYVKPAT*P*RVPTPLLSPRVT*SPVAQTPRPADREIPEPRGTKRNTTLS 172
L SG PA P P +P+ +P + PA R IP T N+T++
Sbjct: 41 LLSGGAKTPARPTVAKPAPKPTPKSAPAPKSPKSPPARRSIPRAAATAANSTIN 94
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +3
Query: 567 EIRRYRTQASNARGSSDQQEASGFVAGQRSLQRVGLREQRREMRREPI*QSGC*AQAKVV 746
++RR + +A+ +QEA A + L R + +QRR + + Q G +Q
Sbjct: 2685 KVRREKEEAARQEKERQEQEARMREAREAELSRQRMEQQRRSQQNPYMNQQGQYSQQPPP 2744
Query: 747 DR*KGSRQKSYSP 785
+ S +Y P
Sbjct: 2745 SYQQSSYPNNYQP 2757
>U80450-6|AAB37831.1| 544|Caenorhabditis elegans Hypothetical
protein M01E11.2 protein.
Length = 544
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/67 (28%), Positives = 27/67 (40%)
Frame = +1
Query: 496 DSEHTAEMLYTHLQALIDRPENQKKFADIERKLQMRGALPTSKKPPDSSLGSEVSRESDS 675
D E L+ L A + P N+KKF D E LQ+ + KK S ++ +
Sbjct: 288 DEREYMENLFNSLCAALMHPANRKKFLDGE-GLQLMNLMLREKKQARQSALKVLNHATSG 346
Query: 676 GSNEERC 696
E C
Sbjct: 347 DEGIENC 353
>AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -1
Query: 333 LFSGLYVKPAT*P*RVPTPLLSPRVT*SPVAQTPRPADREIPEPRGTKRNTTLS 172
L SG PA P P +P+ +P + PA R IP T N+T++
Sbjct: 41 LLSGGAKTPARPTVAKPAPKPTPKSAPAPKSPKSPPARRSIPRAAATAANSTIN 94
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,824,680
Number of Sequences: 27780
Number of extensions: 369620
Number of successful extensions: 1153
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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