Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_B12
         (852 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   2.7  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   3.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   3.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   8.2  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   8.2  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +1

Query: 454 LSPAALVHVHAYRCDSEHTAEMLYTHLQALIDRPE 558
           L+   L+H   Y C +    +++ TH+  +   PE
Sbjct: 369 LTKVQLIHAGNYTCHAVRNQDVVQTHVLTIHTIPE 403


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -2

Query: 203 PEEPNVIRRFLDIL--FKSQRHFV 138
           PE  NV+R+F D+L  F   +H +
Sbjct: 261 PETYNVVRKFRDVLDEFPQPKHML 284


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -2

Query: 203 PEEPNVIRRFLDIL--FKSQRHFV 138
           PE  NV+R+F D+L  F   +H +
Sbjct: 261 PETYNVVRKFRDVLDEFPQPKHML 284


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 463 AALVHVHAYRCDSEHTAEMLYTHLQA 540
           AA+  V   +   +H A+M+Y H Q+
Sbjct: 784 AAMAAVQQSQQRHQHAAQMIYGHQQS 809


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +2

Query: 638 RRWAAKSPESRTPGATKRDASRTYMTVWLLSSSKS 742
           R WA   P +     ++R A+     VW+ SS+ S
Sbjct: 144 RYWAITDPFTYPSKMSRRRAAVLIAIVWICSSAIS 178


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,185
Number of Sequences: 438
Number of extensions: 4493
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)