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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_B11
         (844 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.   225   3e-61
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    75   5e-16
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   2.3  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   4.0  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   7.0  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   7.0  

>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score =  225 bits (550), Expect = 3e-61
 Identities = 105/116 (90%), Positives = 107/116 (92%)
 Frame = +2

Query: 446 RETKTLFTGIPWFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQIRQE 625
           +  K    G P FPLLALIFEKCELATCTPR+PGVAGGDVCSSESFNEDIAVFSKQIRQE
Sbjct: 74  KRDKDAIYGHPLFPLLALIFEKCELATCTPREPGVAGGDVCSSESFNEDIAVFSKQIRQE 133

Query: 626 KPYYIADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGXMPIDLVI 793
           KPYYIADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKG MPIDLVI
Sbjct: 134 KPYYIADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVI 189



 Score = 35.5 bits (78), Expect = 5e-04
 Identities = 15/18 (83%), Positives = 15/18 (83%)
 Frame = +1

Query: 433 PLVHKRDKDAIYGHPLVP 486
           P V KRDKDAIYGHPL P
Sbjct: 70  PDVGKRDKDAIYGHPLFP 87


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 75.4 bits (177), Expect = 5e-16
 Identities = 32/33 (96%), Positives = 32/33 (96%)
 Frame = +2

Query: 695 HLLELEKVHELCDNFCHRYISCLKGXMPIDLVI 793
           HLLELEKVHELCDNFCHRYISCLKG MPIDLVI
Sbjct: 1   HLLELEKVHELCDNFCHRYISCLKGKMPIDLVI 33


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 251 SAGHHERFRSRAQPKT 204
           S G H + RS+ QPKT
Sbjct: 206 SRGRHNQSRSKRQPKT 221


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +1

Query: 409 PLTPSPGXP 435
           PLTPSPG P
Sbjct: 116 PLTPSPGPP 124


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 533 PRDPGVAGGDVCSSESFNEDIAVFSK 610
           P   G  GG+VC    + +D +V S+
Sbjct: 511 PTGDGALGGEVCMWGEYVDDSSVESR 536


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -3

Query: 653 PLDPLCNTVSLDVSVC*IPQCLR*KTPRSTRLRPP 549
           P +PL N +  +++   +P+     TPR    RPP
Sbjct: 382 PKNPLINILYANMNSYSVPEPTISTTPRPEWARPP 416


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,783
Number of Sequences: 336
Number of extensions: 4736
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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