Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_B11
(844 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF427477-1|AAL65145.1| 527|Caenorhabditis elegans UNC-62 splice... 145 3e-35
AF427476-1|AAL65144.1| 523|Caenorhabditis elegans UNC-62 splice... 145 3e-35
AF427475-1|AAL65143.1| 564|Caenorhabditis elegans UNC-62 splice... 145 3e-35
AF427474-1|AAL65142.1| 560|Caenorhabditis elegans UNC-62 splice... 145 3e-35
AC006692-5|AAV58860.1| 490|Caenorhabditis elegans Uncoordinated... 145 3e-35
AC006692-4|AAF39975.1| 527|Caenorhabditis elegans Uncoordinated... 145 3e-35
AC006692-3|AAO61420.1| 523|Caenorhabditis elegans Uncoordinated... 145 3e-35
AC006692-2|AAF39974.1| 564|Caenorhabditis elegans Uncoordinated... 145 3e-35
AC006692-1|AAO61421.1| 560|Caenorhabditis elegans Uncoordinated... 145 3e-35
Z69791-6|CAL36514.1| 241|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z69791-5|CAL36513.1| 281|Caenorhabditis elegans Hypothetical pr... 41 0.001
DQ118141-1|AAZ23152.1| 241|Caenorhabditis elegans hox cofactor ... 41 0.001
Z79759-8|CAE45097.1| 619|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 29 4.1
Z81015-2|CAB02660.1| 411|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical ... 28 7.2
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 28 9.5
Z93389-9|CAB07670.2| 391|Caenorhabditis elegans Hypothetical pr... 28 9.5
>AF427477-1|AAL65145.1| 527|Caenorhabditis elegans UNC-62 splice
variant 1b-7b protein.
Length = 527
Score = 145 bits (352), Expect = 3e-35
Identities = 65/110 (59%), Positives = 85/110 (77%), Gaps = 5/110 (4%)
Frame = +2
Query: 476 PWFPLLALIFEKCELATCTPRDP---GVAGGDVCSSESFNEDIAVFSKQIRQ--EKPYYI 640
P +PLL L+FEKCELAT TPRD G DVCSS SF +D+ F + ++ +K YY+
Sbjct: 67 PLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHTQENADKQYYV 126
Query: 641 ADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGXMPIDLV 790
+P++D +M+Q+IQ+LRFHLLELEKVHELCDNFC+RY+ CLKG MP+D+V
Sbjct: 127 PNPQLDQIMLQSIQMLRFHLLELEKVHELCDNFCNRYVVCLKGKMPLDIV 176
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 445 KRDKDAIYGHPLVP 486
KRDK++IY HPL P
Sbjct: 57 KRDKESIYAHPLYP 70
>AF427476-1|AAL65144.1| 523|Caenorhabditis elegans UNC-62 splice
variant 1b-7a protein.
Length = 523
Score = 145 bits (352), Expect = 3e-35
Identities = 65/110 (59%), Positives = 85/110 (77%), Gaps = 5/110 (4%)
Frame = +2
Query: 476 PWFPLLALIFEKCELATCTPRDP---GVAGGDVCSSESFNEDIAVFSKQIRQ--EKPYYI 640
P +PLL L+FEKCELAT TPRD G DVCSS SF +D+ F + ++ +K YY+
Sbjct: 67 PLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHTQENADKQYYV 126
Query: 641 ADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGXMPIDLV 790
+P++D +M+Q+IQ+LRFHLLELEKVHELCDNFC+RY+ CLKG MP+D+V
Sbjct: 127 PNPQLDQIMLQSIQMLRFHLLELEKVHELCDNFCNRYVVCLKGKMPLDIV 176
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 445 KRDKDAIYGHPLVP 486
KRDK++IY HPL P
Sbjct: 57 KRDKESIYAHPLYP 70
>AF427475-1|AAL65143.1| 564|Caenorhabditis elegans UNC-62 splice
variant 1a-7b protein.
Length = 564
Score = 145 bits (352), Expect = 3e-35
Identities = 65/110 (59%), Positives = 85/110 (77%), Gaps = 5/110 (4%)
Frame = +2
Query: 476 PWFPLLALIFEKCELATCTPRDP---GVAGGDVCSSESFNEDIAVFSKQIRQ--EKPYYI 640
P +PLL L+FEKCELAT TPRD G DVCSS SF +D+ F + ++ +K YY+
Sbjct: 104 PLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHTQENADKQYYV 163
Query: 641 ADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGXMPIDLV 790
+P++D +M+Q+IQ+LRFHLLELEKVHELCDNFC+RY+ CLKG MP+D+V
Sbjct: 164 PNPQLDQIMLQSIQMLRFHLLELEKVHELCDNFCNRYVVCLKGKMPLDIV 213
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 445 KRDKDAIYGHPLVP 486
KRDK++IY HPL P
Sbjct: 94 KRDKESIYAHPLYP 107
>AF427474-1|AAL65142.1| 560|Caenorhabditis elegans UNC-62 splice
variant 1a-7a protein.
Length = 560
Score = 145 bits (352), Expect = 3e-35
Identities = 65/110 (59%), Positives = 85/110 (77%), Gaps = 5/110 (4%)
Frame = +2
Query: 476 PWFPLLALIFEKCELATCTPRDP---GVAGGDVCSSESFNEDIAVFSKQIRQ--EKPYYI 640
P +PLL L+FEKCELAT TPRD G DVCSS SF +D+ F + ++ +K YY+
Sbjct: 104 PLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHTQENADKQYYV 163
Query: 641 ADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGXMPIDLV 790
+P++D +M+Q+IQ+LRFHLLELEKVHELCDNFC+RY+ CLKG MP+D+V
Sbjct: 164 PNPQLDQIMLQSIQMLRFHLLELEKVHELCDNFCNRYVVCLKGKMPLDIV 213
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 445 KRDKDAIYGHPLVP 486
KRDK++IY HPL P
Sbjct: 94 KRDKESIYAHPLYP 107
>AC006692-5|AAV58860.1| 490|Caenorhabditis elegans Uncoordinated
protein 62, isoform g protein.
Length = 490
Score = 145 bits (352), Expect = 3e-35
Identities = 65/110 (59%), Positives = 85/110 (77%), Gaps = 5/110 (4%)
Frame = +2
Query: 476 PWFPLLALIFEKCELATCTPRDP---GVAGGDVCSSESFNEDIAVFSKQIRQ--EKPYYI 640
P +PLL L+FEKCELAT TPRD G DVCSS SF +D+ F + ++ +K YY+
Sbjct: 30 PLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHTQENADKQYYV 89
Query: 641 ADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGXMPIDLV 790
+P++D +M+Q+IQ+LRFHLLELEKVHELCDNFC+RY+ CLKG MP+D+V
Sbjct: 90 PNPQLDQIMLQSIQMLRFHLLELEKVHELCDNFCNRYVVCLKGKMPLDIV 139
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 445 KRDKDAIYGHPLVP 486
KRDK++IY HPL P
Sbjct: 20 KRDKESIYAHPLYP 33
>AC006692-4|AAF39975.1| 527|Caenorhabditis elegans Uncoordinated
protein 62, isoform b protein.
Length = 527
Score = 145 bits (352), Expect = 3e-35
Identities = 65/110 (59%), Positives = 85/110 (77%), Gaps = 5/110 (4%)
Frame = +2
Query: 476 PWFPLLALIFEKCELATCTPRDP---GVAGGDVCSSESFNEDIAVFSKQIRQ--EKPYYI 640
P +PLL L+FEKCELAT TPRD G DVCSS SF +D+ F + ++ +K YY+
Sbjct: 67 PLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHTQENADKQYYV 126
Query: 641 ADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGXMPIDLV 790
+P++D +M+Q+IQ+LRFHLLELEKVHELCDNFC+RY+ CLKG MP+D+V
Sbjct: 127 PNPQLDQIMLQSIQMLRFHLLELEKVHELCDNFCNRYVVCLKGKMPLDIV 176
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 445 KRDKDAIYGHPLVP 486
KRDK++IY HPL P
Sbjct: 57 KRDKESIYAHPLYP 70
>AC006692-3|AAO61420.1| 523|Caenorhabditis elegans Uncoordinated
protein 62, isoform e protein.
Length = 523
Score = 145 bits (352), Expect = 3e-35
Identities = 65/110 (59%), Positives = 85/110 (77%), Gaps = 5/110 (4%)
Frame = +2
Query: 476 PWFPLLALIFEKCELATCTPRDP---GVAGGDVCSSESFNEDIAVFSKQIRQ--EKPYYI 640
P +PLL L+FEKCELAT TPRD G DVCSS SF +D+ F + ++ +K YY+
Sbjct: 67 PLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHTQENADKQYYV 126
Query: 641 ADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGXMPIDLV 790
+P++D +M+Q+IQ+LRFHLLELEKVHELCDNFC+RY+ CLKG MP+D+V
Sbjct: 127 PNPQLDQIMLQSIQMLRFHLLELEKVHELCDNFCNRYVVCLKGKMPLDIV 176
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 445 KRDKDAIYGHPLVP 486
KRDK++IY HPL P
Sbjct: 57 KRDKESIYAHPLYP 70
>AC006692-2|AAF39974.1| 564|Caenorhabditis elegans Uncoordinated
protein 62, isoform a protein.
Length = 564
Score = 145 bits (352), Expect = 3e-35
Identities = 65/110 (59%), Positives = 85/110 (77%), Gaps = 5/110 (4%)
Frame = +2
Query: 476 PWFPLLALIFEKCELATCTPRDP---GVAGGDVCSSESFNEDIAVFSKQIRQ--EKPYYI 640
P +PLL L+FEKCELAT TPRD G DVCSS SF +D+ F + ++ +K YY+
Sbjct: 104 PLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHTQENADKQYYV 163
Query: 641 ADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGXMPIDLV 790
+P++D +M+Q+IQ+LRFHLLELEKVHELCDNFC+RY+ CLKG MP+D+V
Sbjct: 164 PNPQLDQIMLQSIQMLRFHLLELEKVHELCDNFCNRYVVCLKGKMPLDIV 213
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 445 KRDKDAIYGHPLVP 486
KRDK++IY HPL P
Sbjct: 94 KRDKESIYAHPLYP 107
>AC006692-1|AAO61421.1| 560|Caenorhabditis elegans Uncoordinated
protein 62, isoform f protein.
Length = 560
Score = 145 bits (352), Expect = 3e-35
Identities = 65/110 (59%), Positives = 85/110 (77%), Gaps = 5/110 (4%)
Frame = +2
Query: 476 PWFPLLALIFEKCELATCTPRDP---GVAGGDVCSSESFNEDIAVFSKQIRQ--EKPYYI 640
P +PLL L+FEKCELAT TPRD G DVCSS SF +D+ F + ++ +K YY+
Sbjct: 104 PLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHTQENADKQYYV 163
Query: 641 ADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGXMPIDLV 790
+P++D +M+Q+IQ+LRFHLLELEKVHELCDNFC+RY+ CLKG MP+D+V
Sbjct: 164 PNPQLDQIMLQSIQMLRFHLLELEKVHELCDNFCNRYVVCLKGKMPLDIV 213
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 445 KRDKDAIYGHPLVP 486
KRDK++IY HPL P
Sbjct: 94 KRDKESIYAHPLYP 107
>Z69791-6|CAL36514.1| 241|Caenorhabditis elegans Hypothetical
protein F39D8.2b protein.
Length = 241
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Frame = +2
Query: 476 PWFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQIRQEKPYYIAD-PE 652
P P++ L+ EKCE A T D + E+ +DI + + Q ++ E
Sbjct: 31 PLMPIVELLLEKCETAATT--------FDRKAFET--DDIKRLFQSLEQRGVQLSSNRDE 80
Query: 653 VDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLK 766
VD LM AI LR ++ELE+V+ L ++F +Y++ L+
Sbjct: 81 VDELMETAILALRTCMVELERVYSLMESFKAKYLATLR 118
>Z69791-5|CAL36513.1| 281|Caenorhabditis elegans Hypothetical
protein F39D8.2a protein.
Length = 281
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Frame = +2
Query: 476 PWFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQIRQEKPYYIAD-PE 652
P P++ L+ EKCE A T D + E+ +DI + + Q ++ E
Sbjct: 71 PLMPIVELLLEKCETAATT--------FDRKAFET--DDIKRLFQSLEQRGVQLSSNRDE 120
Query: 653 VDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLK 766
VD LM AI LR ++ELE+V+ L ++F +Y++ L+
Sbjct: 121 VDELMETAILALRTCMVELERVYSLMESFKAKYLATLR 158
>DQ118141-1|AAZ23152.1| 241|Caenorhabditis elegans hox cofactor
PSA-3 splice variantbeta protein.
Length = 241
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Frame = +2
Query: 476 PWFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQIRQEKPYYIAD-PE 652
P P++ L+ EKCE A T D + E+ +DI + + Q ++ E
Sbjct: 31 PLMPIVELLLEKCETAATT--------FDRKAFET--DDIKRLFQSLEQRGVQLSSNRDE 80
Query: 653 VDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLK 766
VD LM AI LR ++ELE+V+ L ++F +Y++ L+
Sbjct: 81 VDELMETAILALRTCMVELERVYSLMESFKAKYLATLR 118
>Z79759-8|CAE45097.1| 619|Caenorhabditis elegans Hypothetical
protein ZK858.6 protein.
Length = 619
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 563 VCSSESFNEDIAVFSKQIRQEKPYYIADPEVDSLMVQAI 679
VCS++ E++A+F ++IRQE Y A VD+L V +
Sbjct: 103 VCSNKLSKENVALFKERIRQE---YSAHLIVDNLPVATV 138
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 29.1 bits (62), Expect = 4.1
Identities = 39/135 (28%), Positives = 50/135 (37%), Gaps = 3/135 (2%)
Frame = -2
Query: 609 LLNTAMSSLKDSEEHTSPPATPGSRGVQVASSHFSKIRAS--RGNQGMPVNSVFVSLVD* 436
LL +S L+ PP PG RG H + S RG QG+P +S
Sbjct: 403 LLIEDISELRGKNVIPGPPGPPGPRG------HHGPVGPSGERGPQGLPGHS-------- 448
Query: 435 WXPRGGRERVLPAGGSALEPGGDGSACARGTSLPPPCNLRRGGSRRT*AEP*KLGPSPG- 259
RG R + P G G+ S G PP L + P L PG
Sbjct: 449 -GERGDRGDIGPPGLPGQPGAGEISGSQSGPRGPP--GLPGPPGEKGDLGPPGLPGQPGS 505
Query: 258 VGLRWPPRTISVTGP 214
+GL PP + + GP
Sbjct: 506 LGLPGPPGPMGLRGP 520
>Z81015-2|CAB02660.1| 411|Caenorhabditis elegans Hypothetical
protein C11E4.3 protein.
Length = 411
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 163 CPIIYVYVCTCLCGVL 210
C YVYVC C+C VL
Sbjct: 376 CFRFYVYVCVCVCAVL 391
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 584 NEDIAVFSKQIRQEKPYYIADPEVDSLMVQAIQVLRFHLLELEKVHEL 727
N D+AVF IR+ YYI S ++ I ++ L +K+ +L
Sbjct: 246 NMDLAVFEITIRRNPLYYIYMIVFPSFVINGISIVGIFLKSADKMSKL 293
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 584 NEDIAVFSKQIRQEKPYYIADPEVDSLMVQAIQVLRFHLLELEKVHEL 727
N D+AVF IR+ YYI S ++ I ++ L +K+ +L
Sbjct: 246 NMDLAVFEITIRRNPLYYIYMIVFPSFVINGISIVGIFLKSADKMSKL 293
>AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical
protein T07A9.14 protein.
Length = 204
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 29 RRASRFTAPRSATPRPEPPTNT 94
+RA R++ P S+TP P PP ++
Sbjct: 163 KRAPRYSPPPSSTPTPTPPPSS 184
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +1
Query: 181 YVCTCLCGVLGW-ARDRNRSWWPAEPYTRARAELSWLSLGTTRASTAEVTWRGERCTTST 357
Y C+CL G + NR + A+P + + + T T + W GE C T
Sbjct: 420 YTCSCLSQYFGTNCEEINRCNY-ADPCVNGDCQTTVDGITTNYTCTCDSGWTGENCDTMI 478
Query: 358 G*PIP 372
IP
Sbjct: 479 DYCIP 483
>Z93389-9|CAB07670.2| 391|Caenorhabditis elegans Hypothetical
protein T13F3.2 protein.
Length = 391
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +2
Query: 665 MVQAIQVLRFHLLELEKVHELCDNFCHRY 751
M+ ++ L+ HL+ + K+ + DNFC+ +
Sbjct: 360 MMAIVKSLQKHLMNIHKIIDYADNFCNLF 388
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,952,960
Number of Sequences: 27780
Number of extensions: 475900
Number of successful extensions: 1334
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1321
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -