Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_B10
(848 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 303 1e-82
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 302 2e-82
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 300 9e-82
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 300 9e-82
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 299 2e-81
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 299 2e-81
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 204 6e-53
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 204 6e-53
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 141 5e-34
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 137 8e-33
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 137 8e-33
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 136 2e-32
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 136 2e-32
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 134 6e-32
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 134 1e-31
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 134 1e-31
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 132 4e-31
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 132 4e-31
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 132 4e-31
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 132 4e-31
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 130 2e-30
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 126 3e-29
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 124 1e-28
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 114 6e-26
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 114 6e-26
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 100 1e-21
Z82071-5|CAB04919.2| 514|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z82071-3|CAH04734.1| 336|Caenorhabditis elegans Hypothetical pr... 30 1.8
AY204181-1|AAO39185.1| 336|Caenorhabditis elegans nuclear recep... 30 1.8
AY204180-1|AAO39184.1| 514|Caenorhabditis elegans nuclear recep... 30 1.8
AL110478-13|CAC14397.1| 514|Caenorhabditis elegans Hypothetical... 30 1.8
AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical ... 30 2.4
Z99171-1|CAB16308.1| 286|Caenorhabditis elegans Hypothetical pr... 29 5.5
U00052-3|AAK21426.1| 308|Caenorhabditis elegans Hypothetical pr... 29 5.5
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 28 9.6
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 28 9.6
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 303 bits (744), Expect = 1e-82
Identities = 140/192 (72%), Positives = 151/192 (78%)
Frame = +3
Query: 81 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 260
MREIVH+QAGQCGNQIG+KFWE+ISDEHG+D TG Y G+SDLQL+RINVYYNEAS GKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 261 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 440
PRA LVDLEPGTMD+VR+GP+G LFRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 441 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFXXXXXXXXXXXXX 620
RKEAESCDCLQGFQ KIREEYPDRIM TF
Sbjct: 121 RKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVV 180
Query: 621 XXYNATLSVHQL 656
YNATLSVHQL
Sbjct: 181 EPYNATLSVHQL 192
Score = 85.0 bits (201), Expect = 6e-17
Identities = 36/51 (70%), Positives = 45/51 (88%)
Frame = +1
Query: 661 ENTDMSFCIDNEALYNICFKTLRLSSPSYGDLNXLISLTMSGVTTXPXVPG 813
ENTD +FCIDNEALY+ICF+TL+L++P+YGDLN L+S+TMSGVTT PG
Sbjct: 194 ENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMTMSGVTTCLRFPG 244
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 302 bits (741), Expect = 2e-82
Identities = 140/192 (72%), Positives = 151/192 (78%)
Frame = +3
Query: 81 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 260
MREIVHVQAGQCGNQIG+KFWE+ISDEHG+ G YKGESDLQL+RINVYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 261 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 440
PRAVLVDLEPGTMD+VRSGP+G LFRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 441 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFXXXXXXXXXXXXX 620
RKEAE CDCLQGFQ KIREEYPDRIM++F
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVV 180
Query: 621 XXYNATLSVHQL 656
YNATLSVHQL
Sbjct: 181 EPYNATLSVHQL 192
Score = 85.8 bits (203), Expect = 3e-17
Identities = 37/51 (72%), Positives = 45/51 (88%)
Frame = +1
Query: 661 ENTDMSFCIDNEALYNICFKTLRLSSPSYGDLNXLISLTMSGVTTXPXVPG 813
ENTD +FCIDNEALY+ICF+TL+LS+P+YGDLN L+S+TMSGVTT PG
Sbjct: 194 ENTDETFCIDNEALYDICFRTLKLSNPTYGDLNHLVSVTMSGVTTCLRFPG 244
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 300 bits (736), Expect = 9e-82
Identities = 140/192 (72%), Positives = 151/192 (78%)
Frame = +3
Query: 81 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 260
MREIVH+QAGQCGNQIGSKFWE+ISDEHG+D +G Y G+SDLQL+RINVYYNEA S KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 261 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 440
PRAVLVDLEPGTMD+VRSGP+G LFRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 441 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFXXXXXXXXXXXXX 620
RKEAES DCLQGFQ KIREEYPDRIMNTF
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 621 XXYNATLSVHQL 656
YNATLSVHQL
Sbjct: 181 EPYNATLSVHQL 192
Score = 84.2 bits (199), Expect = 1e-16
Identities = 36/51 (70%), Positives = 44/51 (86%)
Frame = +1
Query: 661 ENTDMSFCIDNEALYNICFKTLRLSSPSYGDLNXLISLTMSGVTTXPXVPG 813
ENTD +FCIDNEALY+ICF+TL+L++P+YGDLN L+S TMSGVTT PG
Sbjct: 194 ENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPG 244
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 300 bits (736), Expect = 9e-82
Identities = 140/192 (72%), Positives = 151/192 (78%)
Frame = +3
Query: 81 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 260
MREIVH+QAGQCGNQIGSKFWE+ISDEHG+D +G Y G+SDLQL+RINVYYNEA S KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 261 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 440
PRAVLVDLEPGTMD+VRSGP+G LFRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 441 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFXXXXXXXXXXXXX 620
RKEAES DCLQGFQ KIREEYPDRIMNTF
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 621 XXYNATLSVHQL 656
YNATLSVHQL
Sbjct: 181 EPYNATLSVHQL 192
Score = 84.2 bits (199), Expect = 1e-16
Identities = 36/51 (70%), Positives = 44/51 (86%)
Frame = +1
Query: 661 ENTDMSFCIDNEALYNICFKTLRLSSPSYGDLNXLISLTMSGVTTXPXVPG 813
ENTD +FCIDNEALY+ICF+TL+L++P+YGDLN L+S TMSGVTT PG
Sbjct: 194 ENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPG 244
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 299 bits (734), Expect = 2e-81
Identities = 139/192 (72%), Positives = 152/192 (79%)
Frame = +3
Query: 81 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 260
MREIVHVQAGQCGNQIGSKFWE+ISDEHG+ G +KGE+DLQL+RI+VYYNEA++GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 261 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 440
PRAVLVDLEPGTMD+VRSGP+G LFRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVI
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 441 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFXXXXXXXXXXXXX 620
RKEAE CDCLQGFQ KIREEYPDRIM++F
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVV 180
Query: 621 XXYNATLSVHQL 656
YNATLSVHQL
Sbjct: 181 EPYNATLSVHQL 192
Score = 83.4 bits (197), Expect = 2e-16
Identities = 35/51 (68%), Positives = 45/51 (88%)
Frame = +1
Query: 661 ENTDMSFCIDNEALYNICFKTLRLSSPSYGDLNXLISLTMSGVTTXPXVPG 813
ENTD ++CIDNEALY+IC++TL+L++P+YGDLN L+SLTMSGVTT PG
Sbjct: 194 ENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTTCLRFPG 244
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 299 bits (733), Expect = 2e-81
Identities = 139/192 (72%), Positives = 152/192 (79%)
Frame = +3
Query: 81 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 260
MREIVHVQAGQCGNQIGSKFWE+ISDEHG+ G +KGESDLQL+RI+VYYNEA++GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 261 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 440
PRAVLVDLEPGTMD+VRSGP+G LFRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVI
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 441 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFXXXXXXXXXXXXX 620
RKEAE CDCLQGFQ KIREE+PDRIM++F
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTVV 180
Query: 621 XXYNATLSVHQL 656
YNATLSVHQL
Sbjct: 181 EPYNATLSVHQL 192
Score = 83.4 bits (197), Expect = 2e-16
Identities = 35/51 (68%), Positives = 45/51 (88%)
Frame = +1
Query: 661 ENTDMSFCIDNEALYNICFKTLRLSSPSYGDLNXLISLTMSGVTTXPXVPG 813
ENTD ++CIDNEALY+IC++TL+L++P+YGDLN L+SLTMSGVTT PG
Sbjct: 194 ENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTTCLRFPG 244
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 204 bits (498), Expect = 6e-53
Identities = 96/192 (50%), Positives = 125/192 (65%)
Frame = +3
Query: 81 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 260
M+EI++VQ GQCGNQIG+KFWE IS+EHG+ T G YKG++ QL+RI YY E KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 261 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 440
PRA+LVDL+P +++ VRS YG LF P+N V G+SGAGNNW++G+Y +GAE+VD VL VI
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 441 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFXXXXXXXXXXXXX 620
R+EAE+ D L+GFQ K+REEY D+ ++T
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVV 180
Query: 621 XXYNATLSVHQL 656
YNA LS+ L
Sbjct: 181 EPYNAILSMPHL 192
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +1
Query: 661 ENTDMSFCIDNEALYNICFKTLRLSS-PSYGDLNXLISLTMSGVTTXPXVPG 813
+N D +FCIDNEA+++IC L+L + +YGDLN L SL +SG+TT G
Sbjct: 194 DNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALSGITTFQRFKG 245
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 204 bits (498), Expect = 6e-53
Identities = 96/192 (50%), Positives = 125/192 (65%)
Frame = +3
Query: 81 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 260
M+EI++VQ GQCGNQIG+KFWE IS+EHG+ T G YKG++ QL+RI YY E KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 261 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 440
PRA+LVDL+P +++ VRS YG LF P+N V G+SGAGNNW++G+Y +GAE+VD VL VI
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 441 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFXXXXXXXXXXXXX 620
R+EAE+ D L+GFQ K+REEY D+ ++T
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVV 180
Query: 621 XXYNATLSVHQL 656
YNA LS+ L
Sbjct: 181 EPYNAILSMPHL 192
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +1
Query: 661 ENTDMSFCIDNEALYNICFKTLRLSS-PSYGDLNXLISLTMSGVTTXPXVPG 813
+N D +FCIDNEA+++IC L+L + +YGDLN L SL +SG+TT G
Sbjct: 194 DNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALSGITTFQRFKG 245
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 141 bits (342), Expect = 5e-34
Identities = 64/133 (48%), Positives = 89/133 (66%), Gaps = 1/133 (0%)
Frame = +3
Query: 84 REIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGES-DLQLDRINVYYNEASSGKYV 260
RE V + GQ G QIG+ WE+ EHG+D G K E + + + +++E+ +GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 261 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 440
PRA+ VDLEP +D +R+G YG LF PD + G+ A NN+A+GHYT G EL+D VLD I
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRI 125
Query: 441 RKEAESCDCLQGF 479
RK+ E+C+ LQGF
Sbjct: 126 RKQTENCEGLQGF 138
Score = 50.4 bits (115), Expect = 2e-06
Identities = 25/76 (32%), Positives = 43/76 (56%)
Frame = +1
Query: 565 ES*IHSALYPRLR*AKSFWSPTTRRCPCTSWXENTDMSFCIDNEALYNICFKTLRLSSPS 744
+S + ++YP + + S P + E +D SF +DNEA+Y++C + L + PS
Sbjct: 167 KSKLEFSVYPAPQVSTSVVEPYNSILTTHTTLELSDCSFMVDNEAIYDLCRQKLHVERPS 226
Query: 745 YGDLNXLISLTMSGVT 792
Y +LN LI+ +S +T
Sbjct: 227 YSNLNRLIAQVVSSIT 242
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 137 bits (332), Expect = 8e-33
Identities = 58/133 (43%), Positives = 87/133 (65%)
Frame = +3
Query: 81 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 260
MRE++ + GQ G QIG+ WE+ EHG+ G +S + + ++++ SG+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 261 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 440
PR++ VDLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G EL+D+VLD I
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 441 RKEAESCDCLQGF 479
R+ A++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/76 (31%), Positives = 44/76 (57%)
Frame = +1
Query: 565 ES*IHSALYPRLR*AKSFWSPTTRRCPCTSWXENTDMSFCIDNEALYNICFKTLRLSSPS 744
+S + ++YP + + + P + E++D +F +DNEA+Y+IC + L + PS
Sbjct: 162 KSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPS 221
Query: 745 YGDLNXLISLTMSGVT 792
Y +LN +IS +S +T
Sbjct: 222 YTNLNRIISQVVSSIT 237
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 137 bits (332), Expect = 8e-33
Identities = 58/133 (43%), Positives = 87/133 (65%)
Frame = +3
Query: 81 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 260
MRE++ + GQ G QIG+ WE+ EHG+ G +S + + ++++ SG+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 261 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 440
PR++ VDLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G EL+D+VLD I
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 441 RKEAESCDCLQGF 479
R+ A++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/76 (31%), Positives = 44/76 (57%)
Frame = +1
Query: 565 ES*IHSALYPRLR*AKSFWSPTTRRCPCTSWXENTDMSFCIDNEALYNICFKTLRLSSPS 744
+S + ++YP + + + P + E++D +F +DNEA+Y+IC + L + PS
Sbjct: 162 KSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPS 221
Query: 745 YGDLNXLISLTMSGVT 792
Y +LN +IS +S +T
Sbjct: 222 YTNLNRIISQVVSSIT 237
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 136 bits (328), Expect = 2e-32
Identities = 56/133 (42%), Positives = 85/133 (63%)
Frame = +3
Query: 81 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 260
MRE++ + GQ G QIG+ WE+ EHG+ G + + ++++ +G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 261 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 440
PR++ VDLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G EL+D+VLD I
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 441 RKEAESCDCLQGF 479
R+ A++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/76 (31%), Positives = 44/76 (57%)
Frame = +1
Query: 565 ES*IHSALYPRLR*AKSFWSPTTRRCPCTSWXENTDMSFCIDNEALYNICFKTLRLSSPS 744
+S + ++YP + + + P + E++D +F +DNEA+Y+IC + L + PS
Sbjct: 162 KSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPS 221
Query: 745 YGDLNXLISLTMSGVT 792
Y +LN +IS +S +T
Sbjct: 222 YTNLNRIISQVVSSIT 237
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 136 bits (328), Expect = 2e-32
Identities = 56/133 (42%), Positives = 85/133 (63%)
Frame = +3
Query: 81 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 260
MRE++ + GQ G QIG+ WE+ EHG+ G + + ++++ +G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 261 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 440
PR++ VDLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G EL+D+VLD I
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 441 RKEAESCDCLQGF 479
R+ A++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/76 (31%), Positives = 43/76 (56%)
Frame = +1
Query: 565 ES*IHSALYPRLR*AKSFWSPTTRRCPCTSWXENTDMSFCIDNEALYNICFKTLRLSSPS 744
+S + ++YP + + P + E++D +F +DNEA+Y+IC + L + PS
Sbjct: 162 KSKLEFSIYPAPQVCTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPS 221
Query: 745 YGDLNXLISLTMSGVT 792
Y +LN +IS +S +T
Sbjct: 222 YTNLNRIISQVVSSIT 237
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 134 bits (325), Expect = 6e-32
Identities = 61/135 (45%), Positives = 86/135 (63%), Gaps = 2/135 (1%)
Frame = +3
Query: 81 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLD--RINVYYNEASSGK 254
MREIV + GQ G QIG+ WE+ EHG+ G+ ++ ++ N +++E SGK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 255 YVPRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 434
+VPRA+ VDLEP +D VR+G Y LF P+ + G+ A NN+A+GHYT G EL+D V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 435 VIRKEAESCDCLQGF 479
+R+ E C LQGF
Sbjct: 121 RVRRLTERCQSLQGF 135
Score = 44.8 bits (101), Expect = 8e-05
Identities = 23/70 (32%), Positives = 38/70 (54%)
Frame = +1
Query: 583 ALYPRLR*AKSFWSPTTRRCPCTSWXENTDMSFCIDNEALYNICFKTLRLSSPSYGDLNX 762
++YP + + S P + E++D SF +DNEA+Y I L + SP+Y LN
Sbjct: 170 SIYPAPQISTSMVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEITKVNLGVRSPTYTHLNR 229
Query: 763 LISLTMSGVT 792
L++ +S +T
Sbjct: 230 LLAQVVSSIT 239
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 134 bits (323), Expect = 1e-31
Identities = 56/133 (42%), Positives = 84/133 (63%)
Frame = +3
Query: 81 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 260
MRE++ + GQ G QIG+ WE+ EHG+ G E + ++++ +G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 261 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 440
PR++ VDLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G EL+D+ LD I
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 441 RKEAESCDCLQGF 479
R+ A++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/76 (31%), Positives = 44/76 (57%)
Frame = +1
Query: 565 ES*IHSALYPRLR*AKSFWSPTTRRCPCTSWXENTDMSFCIDNEALYNICFKTLRLSSPS 744
+S + ++YP + + + P + E++D +F +DNEA+Y+IC + L + PS
Sbjct: 162 KSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPS 221
Query: 745 YGDLNXLISLTMSGVT 792
Y +LN +IS +S +T
Sbjct: 222 YTNLNRIISQVVSSIT 237
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 134 bits (323), Expect = 1e-31
Identities = 56/133 (42%), Positives = 84/133 (63%)
Frame = +3
Query: 81 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 260
MRE++ + GQ G QIG+ WE+ EHG+ G E + ++++ +G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 261 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 440
PR++ VDLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G EL+D+ LD I
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 441 RKEAESCDCLQGF 479
R+ A++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/76 (31%), Positives = 44/76 (57%)
Frame = +1
Query: 565 ES*IHSALYPRLR*AKSFWSPTTRRCPCTSWXENTDMSFCIDNEALYNICFKTLRLSSPS 744
+S + ++YP + + + P + E++D +F +DNEA+Y+IC + L + PS
Sbjct: 162 KSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPS 221
Query: 745 YGDLNXLISLTMSGVT 792
Y +LN +IS +S +T
Sbjct: 222 YTNLNRIISQVVSSIT 237
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 132 bits (318), Expect = 4e-31
Identities = 59/135 (43%), Positives = 86/135 (63%), Gaps = 2/135 (1%)
Frame = +3
Query: 81 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDL--QLDRINVYYNEASSGK 254
MRE++ + GQ G QIG+ WE+ EHG+ G + L D + +++E SG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 255 YVPRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 434
+VPRAV+VDLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 435 VIRKEAESCDCLQGF 479
IR+ A++C LQGF
Sbjct: 121 RIRRLADNCTGLQGF 135
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +1
Query: 583 ALYPRLR*AKSFWSPTTRRCPCTSWXENTDMSFCIDNEALYNICFKTLRLSSPSYGDLNX 762
++YP + + + P + E++D SF +DNEA+Y+IC + L + PSY +LN
Sbjct: 170 SIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNR 229
Query: 763 LISLTMSGVT 792
LI +S +T
Sbjct: 230 LIGQIVSSIT 239
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 132 bits (318), Expect = 4e-31
Identities = 57/134 (42%), Positives = 87/134 (64%), Gaps = 2/134 (1%)
Frame = +3
Query: 84 REIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLD--RINVYYNEASSGKY 257
RE++ + GQ G Q+G+ WE+ EHG+ G+ E L +D N +++E +GK+
Sbjct: 7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKH 66
Query: 258 VPRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 437
VPRA++VDLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E++D V+D
Sbjct: 67 VPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDR 126
Query: 438 IRKEAESCDCLQGF 479
+R+ E+C LQGF
Sbjct: 127 VRRLVENCRGLQGF 140
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/76 (35%), Positives = 44/76 (57%)
Frame = +1
Query: 565 ES*IHSALYPRLR*AKSFWSPTTRRCPCTSWXENTDMSFCIDNEALYNICFKTLRLSSPS 744
+S + +YP + + S P + E++D SF +DNEA+Y+IC + L L+ P+
Sbjct: 169 KSKLEFCIYPAPQVSTSMVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDLARPT 228
Query: 745 YGDLNXLISLTMSGVT 792
Y +LN LI+ +S VT
Sbjct: 229 YTNLNRLIAQVISSVT 244
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 132 bits (318), Expect = 4e-31
Identities = 59/135 (43%), Positives = 86/135 (63%), Gaps = 2/135 (1%)
Frame = +3
Query: 81 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDL--QLDRINVYYNEASSGK 254
MRE++ + GQ G QIG+ WE+ EHG+ G + L D + +++E SG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 255 YVPRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 434
+VPRAV+VDLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 435 VIRKEAESCDCLQGF 479
IR+ A++C LQGF
Sbjct: 121 RIRRLADNCTGLQGF 135
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +1
Query: 583 ALYPRLR*AKSFWSPTTRRCPCTSWXENTDMSFCIDNEALYNICFKTLRLSSPSYGDLNX 762
++YP + + + P + E++D SF +DNEA+Y+IC + L + PSY +LN
Sbjct: 170 SIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNR 229
Query: 763 LISLTMSGVT 792
LI +S +T
Sbjct: 230 LIGQIVSSIT 239
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 132 bits (318), Expect = 4e-31
Identities = 59/135 (43%), Positives = 86/135 (63%), Gaps = 2/135 (1%)
Frame = +3
Query: 81 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDL--QLDRINVYYNEASSGK 254
MRE++ + GQ G QIG+ WE+ EHG+ G + L D + +++E SG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 255 YVPRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 434
+VPRAV+VDLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 435 VIRKEAESCDCLQGF 479
IR+ A++C LQGF
Sbjct: 121 RIRRLADNCTGLQGF 135
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +1
Query: 583 ALYPRLR*AKSFWSPTTRRCPCTSWXENTDMSFCIDNEALYNICFKTLRLSSPSYGDLNX 762
++YP + + + P + E++D SF +DNEA+Y+IC + L + PSY +LN
Sbjct: 170 SIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNR 229
Query: 763 LISLTMSGVT 792
LI +S +T
Sbjct: 230 LIGQIVSSIT 239
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 130 bits (313), Expect = 2e-30
Identities = 58/134 (43%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Frame = +3
Query: 84 REIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDL--QLDRINVYYNEASSGKY 257
RE++ + GQ G QIG+ WE+ EHG+ G + L D + +++E SG++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 258 VPRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 437
VPRAV+VDLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 438 IRKEAESCDCLQGF 479
IR+ A++C LQGF
Sbjct: 121 IRRLADNCTGLQGF 134
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +1
Query: 583 ALYPRLR*AKSFWSPTTRRCPCTSWXENTDMSFCIDNEALYNICFKTLRLSSPSYGDLNX 762
++YP + + + P + E++D SF +DNEA+Y+IC + L + PSY +LN
Sbjct: 169 SIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNR 228
Query: 763 LISLTMSGVT 792
LI +S +T
Sbjct: 229 LIGQIVSSIT 238
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 126 bits (303), Expect = 3e-29
Identities = 62/190 (32%), Positives = 96/190 (50%)
Frame = +3
Query: 81 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 260
MRE++ + GQ G QIG+ WE+ EHG+ G E D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHV 59
Query: 261 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 440
PR++ VDLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E++D+ LD I
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 441 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFXXXXXXXXXXXXX 620
R+ A +C+ LQGF ++ EY + F
Sbjct: 120 RRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSVV 179
Query: 621 XXYNATLSVH 650
YN+ L+ H
Sbjct: 180 EPYNSILTTH 189
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/86 (34%), Positives = 50/86 (58%)
Frame = +1
Query: 535 SARSGRNTRTES*IHSALYPRLR*AKSFWSPTTRRCPCTSWXENTDMSFCIDNEALYNIC 714
SA G+ ++ E ++YP + + S P + E++D SF +DNEA+Y+IC
Sbjct: 155 SAEYGKKSKLEF----SIYPAPQISTSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDIC 210
Query: 715 FKTLRLSSPSYGDLNXLISLTMSGVT 792
+ LR+S P+Y +LN +IS +S +T
Sbjct: 211 RRNLRVSRPTYNNLNRIISQVVSSIT 236
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 124 bits (298), Expect = 1e-28
Identities = 55/134 (41%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Frame = +3
Query: 84 REIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGES--DLQLDRINVYYNEASSGKY 257
RE++ + GQ G QIG+ WE+ EHG+ G + + D + + IN ++ E + GK+
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 258 VPRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 437
VPR + VDLEP +D VR+G Y LF P+ + G+ A N +A+G YT G E++D V+D
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 438 IRKEAESCDCLQGF 479
+++ AE+C+ LQGF
Sbjct: 128 VKRLAENCNGLQGF 141
Score = 51.6 bits (118), Expect = 7e-07
Identities = 24/70 (34%), Positives = 42/70 (60%)
Frame = +1
Query: 583 ALYPRLR*AKSFWSPTTRRCPCTSWXENTDMSFCIDNEALYNICFKTLRLSSPSYGDLNX 762
A+YP + + S P + E++D +F +DNEA+Y+IC + L L+ P+Y +LN
Sbjct: 176 AIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNLNR 235
Query: 763 LISLTMSGVT 792
L++ +S +T
Sbjct: 236 LVAQIISSIT 245
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 114 bits (275), Expect = 6e-26
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 4/202 (1%)
Frame = +3
Query: 90 IVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYVPRA 269
++ V GQCGNQ+ FW+ + DEHG++ G E D+ D+ ++ + +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMN-DKKDLLFYQADDDHYVPRA 65
Query: 270 VLVDLEPGTMDAVRSGP-YGMLFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVI 440
VLVDLEP ++ + P + LF DN GAGNNWA G Y +G E+ + ++D+I
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 441 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTF-XXXXXXXXXXXX 617
+EAE+ + L G ++RE +P +++ T+
Sbjct: 125 IREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVV 184
Query: 618 XXXYNATLSVHQLXREHGYVLL 683
YN LS+ +L +V++
Sbjct: 185 VHPYNWVLSMQRLIENPDHVVV 206
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 114 bits (275), Expect = 6e-26
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 4/202 (1%)
Frame = +3
Query: 90 IVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYVPRA 269
++ V GQCGNQ+ FW+ + DEHG++ G E D+ D+ ++ + +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMN-DKKDLLFYQADDDHYVPRA 65
Query: 270 VLVDLEPGTMDAVRSGP-YGMLFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVI 440
VLVDLEP ++ + P + LF DN GAGNNWA G Y +G E+ + ++D+I
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 441 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTF-XXXXXXXXXXXX 617
+EAE+ + L G ++RE +P +++ T+
Sbjct: 125 IREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVV 184
Query: 618 XXXYNATLSVHQLXREHGYVLL 683
YN LS+ +L +V++
Sbjct: 185 VHPYNWVLSMQRLIENPDHVVV 206
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 100 bits (240), Expect = 1e-21
Identities = 45/109 (41%), Positives = 70/109 (64%), Gaps = 2/109 (1%)
Frame = +3
Query: 159 EHGVDTTGVYKGES--DLQLDRINVYYNEASSGKYVPRAVLVDLEPGTMDAVRSGPYGML 332
EHG+ G + + D + + IN ++ E + GK+VPR + VDLEP +D VR+G Y L
Sbjct: 5 EHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSL 64
Query: 333 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKEAESCDCLQGF 479
F P+ + G+ A N +A+G YT G E++D V+D +++ AE+C+ LQGF
Sbjct: 65 FHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGF 113
Score = 51.6 bits (118), Expect = 7e-07
Identities = 24/70 (34%), Positives = 42/70 (60%)
Frame = +1
Query: 583 ALYPRLR*AKSFWSPTTRRCPCTSWXENTDMSFCIDNEALYNICFKTLRLSSPSYGDLNX 762
A+YP + + S P + E++D +F +DNEA+Y+IC + L L+ P+Y +LN
Sbjct: 148 AIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNLNR 207
Query: 763 LISLTMSGVT 792
L++ +S +T
Sbjct: 208 LVAQIISSIT 217
>Z82071-5|CAB04919.2| 514|Caenorhabditis elegans Hypothetical
protein W05B5.3a protein.
Length = 514
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 275 ENGTGDVFTTRCLIVVNVYSVELQVALPFVNS 180
E TG ++T RC I N + L+ A+ F NS
Sbjct: 239 EKCTGPIYTDRCPITSNFIVIPLKAAIDFANS 270
>Z82071-3|CAH04734.1| 336|Caenorhabditis elegans Hypothetical
protein W05B5.3b protein.
Length = 336
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 275 ENGTGDVFTTRCLIVVNVYSVELQVALPFVNS 180
E TG ++T RC I N + L+ A+ F NS
Sbjct: 61 EKCTGPIYTDRCPITSNFIVIPLKAAIDFANS 92
>AY204181-1|AAO39185.1| 336|Caenorhabditis elegans nuclear receptor
NHR-85 protein.
Length = 336
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 275 ENGTGDVFTTRCLIVVNVYSVELQVALPFVNS 180
E TG ++T RC I N + L+ A+ F NS
Sbjct: 61 EKCTGPIYTDRCPITSNFIVIPLKAAIDFANS 92
>AY204180-1|AAO39184.1| 514|Caenorhabditis elegans nuclear receptor
NHR-85 protein.
Length = 514
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 275 ENGTGDVFTTRCLIVVNVYSVELQVALPFVNS 180
E TG ++T RC I N + L+ A+ F NS
Sbjct: 239 EKCTGPIYTDRCPITSNFIVIPLKAAIDFANS 270
>AL110478-13|CAC14397.1| 514|Caenorhabditis elegans Hypothetical
protein W05B5.3a protein.
Length = 514
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 275 ENGTGDVFTTRCLIVVNVYSVELQVALPFVNS 180
E TG ++T RC I N + L+ A+ F NS
Sbjct: 239 EKCTGPIYTDRCPITSNFIVIPLKAAIDFANS 270
>AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical
protein Y55B1AL.3a protein.
Length = 923
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 566 NHEYIQRCTLA*GERSRFGALQR-DAVRAPAGSRTRICPSASTTKRYTTSASRR*DSAVL 742
N I+RC A E F + + +R P SR +CP ST+ + +S++ V
Sbjct: 2 NRTPIRRCKSAEIEEDPFSPIPKFSRLRTPRTSREYVCPLKSTSPQSPSSSTENEPPPVS 61
Query: 743 VTA 751
VT+
Sbjct: 62 VTS 64
>Z99171-1|CAB16308.1| 286|Caenorhabditis elegans Hypothetical
protein F47G4.1 protein.
Length = 286
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +1
Query: 151 SQTSMASTRPEFTKGRATCSSTE*TFTTMRHLVVNTSPVPFSWIWSRALWTRSDQDPTEC 330
+ TS +F ATC E T + H NT+ P++ +S WT ++ EC
Sbjct: 57 TSTSETKIAFKFLADNATCPIQEPT-SLQGHYFTNTTYQPYTVSYSAPTWTFANSTQLEC 115
>U00052-3|AAK21426.1| 308|Caenorhabditis elegans Hypothetical
protein K02F3.4 protein.
Length = 308
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -2
Query: 220 ILSSCRSLSPL*TPVVSTPCSSEIISQNFDPI*FPHWPACTWTISRISNTIFTHAFT 50
IL+SCR+L T V P +I S P+ F H P C + T +T T
Sbjct: 42 ILNSCRNLPDCLTTTV--PQLHQINSAEQSPLQFTHQPNCDLIVVLDEQTTYTTTMT 96
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 518 HGHSAAQQDPGGIPGQNHEYIQRCTLA*GERSRFGALQRDAVRAPAGSRTR 670
H H Q PGG P Q + +Q+ + ++ + LQR A AGS +
Sbjct: 2033 HQHDQGSQGPGGKP-QAYHLVQQGSQQQQQQQQQATLQRRNAAAAAGSNVQ 2082
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 518 HGHSAAQQDPGGIPGQNHEYIQRCTLA*GERSRFGALQRDAVRAPAGSRTR 670
H H Q PGG P Q + +Q+ + ++ + LQR A AGS +
Sbjct: 2033 HQHDQGSQGPGGKP-QAYHLVQQGSQQQQQQQQQATLQRRNAAAAAGSNVQ 2082
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,191,064
Number of Sequences: 27780
Number of extensions: 380116
Number of successful extensions: 894
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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