Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_B10
         (848 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    25   0.88 
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    24   2.0  
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    24   2.0  
M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee homeobox-...    23   4.7  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   8.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   8.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   8.2  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 25.0 bits (52), Expect = 0.88
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +3

Query: 417 VDSVLDVIRKEAESCDCLQG 476
           +DS++++IR   ++CD L G
Sbjct: 106 IDSIINIIRVRVDACDRLWG 125


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 776 PCPG*RPXPXFPG 814
           P PG RP P FPG
Sbjct: 27  PQPGRRPFPTFPG 39


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 776 PCPG*RPXPXFPG 814
           P PG RP P FPG
Sbjct: 13  PQPGRRPFPTFPG 25


>M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H40. ).
          Length = 74

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -3

Query: 369 RRSDRRQSYRAGTAF 325
           RR DRR++ RA TAF
Sbjct: 1   RRWDRREARRARTAF 15


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -2

Query: 490 WVNWNPWRQSQ 458
           W  WN W+++Q
Sbjct: 696 WNKWNDWQETQ 706


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -2

Query: 490 WVNWNPWRQSQ 458
           W  WN W+++Q
Sbjct: 696 WNKWNDWQETQ 706


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -2

Query: 490 WVNWNPWRQSQ 458
           W  WN W+++Q
Sbjct: 696 WNKWNDWQETQ 706


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,549
Number of Sequences: 438
Number of extensions: 4289
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)